Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10760

Experiment: Uracil 0.8921 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10755 and A4249_RS10760 are separated by 114 nucleotidesA4249_RS10760 and A4249_RS10765 overlap by 4 nucleotidesA4249_RS10765 and A4249_RS10770 overlap by 2 nucleotides A4249_RS10755: A4249_RS10755 - homogentisate 1,2-dioxygenase, at 2,161,232 to 2,162,527 _RS10755 A4249_RS10760: A4249_RS10760 - hypothetical protein, at 2,162,642 to 2,163,145 _RS10760 A4249_RS10765: A4249_RS10765 - Lrp/AsnC ligand binding domain-containing protein, at 2,163,142 to 2,163,399 _RS10765 A4249_RS10770: A4249_RS10770 - alpha/beta hydrolase, at 2,163,398 to 2,164,252 _RS10770 Position (kb) 2162 2163 2164Strain fitness (log2 ratio) -2 -1 0 1at 2161.668 kb on + strand, within A4249_RS10755at 2161.668 kb on + strand, within A4249_RS10755at 2161.668 kb on + strand, within A4249_RS10755at 2161.669 kb on - strand, within A4249_RS10755at 2161.669 kb on - strand, within A4249_RS10755at 2161.669 kb on - strand, within A4249_RS10755at 2161.669 kb on - strand, within A4249_RS10755at 2161.669 kb on - strand, within A4249_RS10755at 2161.791 kb on + strand, within A4249_RS10755at 2161.792 kb on - strand, within A4249_RS10755at 2161.792 kb on - strand, within A4249_RS10755at 2161.792 kb on - strand, within A4249_RS10755at 2161.830 kb on + strand, within A4249_RS10755at 2161.830 kb on + strand, within A4249_RS10755at 2161.830 kb on + strand, within A4249_RS10755at 2161.830 kb on + strand, within A4249_RS10755at 2161.831 kb on - strand, within A4249_RS10755at 2161.831 kb on - strand, within A4249_RS10755at 2161.831 kb on - strand, within A4249_RS10755at 2161.920 kb on + strand, within A4249_RS10755at 2161.920 kb on + strand, within A4249_RS10755at 2161.920 kb on + strand, within A4249_RS10755at 2161.920 kb on + strand, within A4249_RS10755at 2161.920 kb on + strand, within A4249_RS10755at 2161.921 kb on - strand, within A4249_RS10755at 2161.921 kb on - strand, within A4249_RS10755at 2161.921 kb on - strand, within A4249_RS10755at 2161.921 kb on - strand, within A4249_RS10755at 2161.921 kb on - strand, within A4249_RS10755at 2161.935 kb on + strand, within A4249_RS10755at 2161.935 kb on + strand, within A4249_RS10755at 2161.936 kb on - strand, within A4249_RS10755at 2161.936 kb on - strand, within A4249_RS10755at 2161.973 kb on + strand, within A4249_RS10755at 2161.974 kb on - strand, within A4249_RS10755at 2161.974 kb on - strand, within A4249_RS10755at 2161.974 kb on - strand, within A4249_RS10755at 2162.088 kb on + strand, within A4249_RS10755at 2162.088 kb on + strand, within A4249_RS10755at 2162.088 kb on + strand, within A4249_RS10755at 2162.089 kb on - strand, within A4249_RS10755at 2162.089 kb on - strand, within A4249_RS10755at 2162.089 kb on - strand, within A4249_RS10755at 2162.089 kb on - strand, within A4249_RS10755at 2162.089 kb on - strand, within A4249_RS10755at 2162.089 kb on - strand, within A4249_RS10755at 2162.089 kb on - strand, within A4249_RS10755at 2162.089 kb on - strand, within A4249_RS10755at 2162.124 kb on + strand, within A4249_RS10755at 2162.124 kb on + strand, within A4249_RS10755at 2162.124 kb on + strand, within A4249_RS10755at 2162.124 kb on + strand, within A4249_RS10755at 2162.124 kb on + strand, within A4249_RS10755at 2162.124 kb on + strand, within A4249_RS10755at 2162.124 kb on + strand, within A4249_RS10755at 2162.125 kb on - strand, within A4249_RS10755at 2162.125 kb on - strand, within A4249_RS10755at 2162.125 kb on - strand, within A4249_RS10755at 2162.125 kb on - strand, within A4249_RS10755at 2162.125 kb on - strand, within A4249_RS10755at 2162.125 kb on - strand, within A4249_RS10755at 2162.125 kb on - strand, within A4249_RS10755at 2162.125 kb on - strand, within A4249_RS10755at 2162.125 kb on - strand, within A4249_RS10755at 2162.125 kb on - strand, within A4249_RS10755at 2162.175 kb on + strand, within A4249_RS10755at 2162.175 kb on + strand, within A4249_RS10755at 2162.175 kb on + strand, within A4249_RS10755at 2162.176 kb on - strand, within A4249_RS10755at 2162.176 kb on - strand, within A4249_RS10755at 2162.176 kb on - strand, within A4249_RS10755at 2162.176 kb on - strand, within A4249_RS10755at 2162.176 kb on - strand, within A4249_RS10755at 2162.176 kb on - strand, within A4249_RS10755at 2162.176 kb on - strand, within A4249_RS10755at 2162.251 kb on + strand, within A4249_RS10755at 2162.252 kb on - strand, within A4249_RS10755at 2162.252 kb on - strand, within A4249_RS10755at 2162.308 kb on - strand, within A4249_RS10755at 2162.341 kb on - strand, within A4249_RS10755at 2162.407 kb on - strandat 2162.502 kb on + strandat 2162.502 kb on + strandat 2162.502 kb on + strandat 2162.502 kb on + strandat 2162.502 kb on + strandat 2162.503 kb on - strandat 2162.503 kb on - strandat 2162.503 kb on - strandat 2162.540 kb on + strandat 2162.541 kb on - strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.648 kb on + strandat 2162.649 kb on - strandat 2162.649 kb on - strandat 2162.649 kb on - strandat 2162.649 kb on - strandat 2162.649 kb on - strandat 2162.649 kb on - strandat 2162.795 kb on + strand, within A4249_RS10760at 2162.795 kb on + strand, within A4249_RS10760at 2162.795 kb on + strand, within A4249_RS10760at 2162.796 kb on - strand, within A4249_RS10760at 2162.796 kb on - strand, within A4249_RS10760at 2162.796 kb on - strand, within A4249_RS10760at 2162.796 kb on - strand, within A4249_RS10760at 2162.796 kb on - strand, within A4249_RS10760at 2162.834 kb on + strand, within A4249_RS10760at 2162.834 kb on + strand, within A4249_RS10760at 2162.834 kb on + strand, within A4249_RS10760at 2162.834 kb on + strand, within A4249_RS10760at 2162.834 kb on + strand, within A4249_RS10760at 2162.834 kb on + strand, within A4249_RS10760at 2162.834 kb on + strand, within A4249_RS10760at 2162.834 kb on + strand, within A4249_RS10760at 2162.834 kb on + strand, within A4249_RS10760at 2162.834 kb on + strand, within A4249_RS10760at 2162.834 kb on + strand, within A4249_RS10760at 2162.835 kb on - strand, within A4249_RS10760at 2162.835 kb on - strand, within A4249_RS10760at 2162.835 kb on - strand, within A4249_RS10760at 2162.835 kb on - strand, within A4249_RS10760at 2162.835 kb on - strand, within A4249_RS10760at 2162.835 kb on - strand, within A4249_RS10760at 2162.835 kb on - strand, within A4249_RS10760at 2162.835 kb on - strand, within A4249_RS10760at 2162.997 kb on - strand, within A4249_RS10760at 2163.143 kb on + strandat 2163.144 kb on - strandat 2163.299 kb on + strand, within A4249_RS10765at 2163.299 kb on + strand, within A4249_RS10765at 2163.299 kb on + strand, within A4249_RS10765at 2163.299 kb on + strand, within A4249_RS10765at 2163.300 kb on - strand, within A4249_RS10765at 2163.300 kb on - strand, within A4249_RS10765at 2163.300 kb on - strand, within A4249_RS10765at 2163.300 kb on - strand, within A4249_RS10765at 2163.300 kb on - strand, within A4249_RS10765at 2163.300 kb on - strand, within A4249_RS10765at 2163.300 kb on - strand, within A4249_RS10765at 2163.300 kb on - strand, within A4249_RS10765at 2163.356 kb on + strand, within A4249_RS10765at 2163.432 kb on + strandat 2163.433 kb on - strandat 2163.491 kb on + strand, within A4249_RS10770at 2163.491 kb on + strand, within A4249_RS10770at 2163.491 kb on + strand, within A4249_RS10770at 2163.492 kb on - strand, within A4249_RS10770at 2163.492 kb on - strand, within A4249_RS10770at 2163.492 kb on - strand, within A4249_RS10770at 2163.492 kb on - strand, within A4249_RS10770at 2163.492 kb on - strand, within A4249_RS10770at 2163.492 kb on - strand, within A4249_RS10770at 2163.492 kb on - strand, within A4249_RS10770at 2163.593 kb on + strand, within A4249_RS10770at 2163.593 kb on + strand, within A4249_RS10770at 2163.593 kb on + strand, within A4249_RS10770at 2163.758 kb on + strand, within A4249_RS10770at 2163.758 kb on + strand, within A4249_RS10770at 2163.758 kb on + strand, within A4249_RS10770at 2163.758 kb on + strand, within A4249_RS10770at 2163.758 kb on + strand, within A4249_RS10770at 2163.759 kb on - strand, within A4249_RS10770at 2163.759 kb on - strand, within A4249_RS10770at 2163.759 kb on - strand, within A4249_RS10770at 2163.759 kb on - strand, within A4249_RS10770at 2163.759 kb on - strand, within A4249_RS10770at 2163.759 kb on - strand, within A4249_RS10770at 2163.759 kb on - strand, within A4249_RS10770at 2163.759 kb on - strand, within A4249_RS10770at 2163.881 kb on - strand, within A4249_RS10770at 2163.881 kb on - strand, within A4249_RS10770

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Per-strain Table

Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C)
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2,161,668 + A4249_RS10755 0.34 -0.8
2,161,668 + A4249_RS10755 0.34 +0.4
2,161,668 + A4249_RS10755 0.34 -0.2
2,161,669 - A4249_RS10755 0.34 +0.7
2,161,669 - A4249_RS10755 0.34 -0.1
2,161,669 - A4249_RS10755 0.34 +1.2
2,161,669 - A4249_RS10755 0.34 -0.0
2,161,669 - A4249_RS10755 0.34 +0.9
2,161,791 + A4249_RS10755 0.43 +0.5
2,161,792 - A4249_RS10755 0.43 -0.5
2,161,792 - A4249_RS10755 0.43 -0.9
2,161,792 - A4249_RS10755 0.43 +0.2
2,161,830 + A4249_RS10755 0.46 +0.3
2,161,830 + A4249_RS10755 0.46 -0.5
2,161,830 + A4249_RS10755 0.46 -0.4
2,161,830 + A4249_RS10755 0.46 -0.0
2,161,831 - A4249_RS10755 0.46 -0.3
2,161,831 - A4249_RS10755 0.46 -1.4
2,161,831 - A4249_RS10755 0.46 +0.1
2,161,920 + A4249_RS10755 0.53 +0.6
2,161,920 + A4249_RS10755 0.53 -0.6
2,161,920 + A4249_RS10755 0.53 -0.2
2,161,920 + A4249_RS10755 0.53 -0.6
2,161,920 + A4249_RS10755 0.53 +0.0
2,161,921 - A4249_RS10755 0.53 -2.2
2,161,921 - A4249_RS10755 0.53 -0.5
2,161,921 - A4249_RS10755 0.53 -1.0
2,161,921 - A4249_RS10755 0.53 -0.6
2,161,921 - A4249_RS10755 0.53 -0.3
2,161,935 + A4249_RS10755 0.54 +0.1
2,161,935 + A4249_RS10755 0.54 +0.0
2,161,936 - A4249_RS10755 0.54 -0.8
2,161,936 - A4249_RS10755 0.54 +0.3
2,161,973 + A4249_RS10755 0.57 -0.5
2,161,974 - A4249_RS10755 0.57 +0.1
2,161,974 - A4249_RS10755 0.57 -0.5
2,161,974 - A4249_RS10755 0.57 +0.4
2,162,088 + A4249_RS10755 0.66 +0.0
2,162,088 + A4249_RS10755 0.66 +0.2
2,162,088 + A4249_RS10755 0.66 -0.0
2,162,089 - A4249_RS10755 0.66 +0.5
2,162,089 - A4249_RS10755 0.66 +0.0
2,162,089 - A4249_RS10755 0.66 +0.5
2,162,089 - A4249_RS10755 0.66 +0.2
2,162,089 - A4249_RS10755 0.66 +0.1
2,162,089 - A4249_RS10755 0.66 +0.2
2,162,089 - A4249_RS10755 0.66 -0.6
2,162,089 - A4249_RS10755 0.66 -0.1
2,162,124 + A4249_RS10755 0.69 -0.1
2,162,124 + A4249_RS10755 0.69 +0.1
2,162,124 + A4249_RS10755 0.69 -0.6
2,162,124 + A4249_RS10755 0.69 -0.0
2,162,124 + A4249_RS10755 0.69 -0.2
2,162,124 + A4249_RS10755 0.69 -0.3
2,162,124 + A4249_RS10755 0.69 +0.9
2,162,125 - A4249_RS10755 0.69 -0.2
2,162,125 - A4249_RS10755 0.69 -0.5
2,162,125 - A4249_RS10755 0.69 +0.8
2,162,125 - A4249_RS10755 0.69 -0.1
2,162,125 - A4249_RS10755 0.69 +0.3
2,162,125 - A4249_RS10755 0.69 -0.1
2,162,125 - A4249_RS10755 0.69 -0.4
2,162,125 - A4249_RS10755 0.69 -0.4
2,162,125 - A4249_RS10755 0.69 +0.7
2,162,125 - A4249_RS10755 0.69 +0.7
2,162,175 + A4249_RS10755 0.73 -0.5
2,162,175 + A4249_RS10755 0.73 +0.2
2,162,175 + A4249_RS10755 0.73 -0.6
2,162,176 - A4249_RS10755 0.73 -0.1
2,162,176 - A4249_RS10755 0.73 -0.7
2,162,176 - A4249_RS10755 0.73 +0.1
2,162,176 - A4249_RS10755 0.73 -0.1
2,162,176 - A4249_RS10755 0.73 -0.4
2,162,176 - A4249_RS10755 0.73 -1.1
2,162,176 - A4249_RS10755 0.73 -0.7
2,162,251 + A4249_RS10755 0.79 +1.1
2,162,252 - A4249_RS10755 0.79 +0.5
2,162,252 - A4249_RS10755 0.79 -0.4
2,162,308 - A4249_RS10755 0.83 +0.7
2,162,341 - A4249_RS10755 0.86 +0.1
2,162,407 - -1.1
2,162,502 + -0.4
2,162,502 + +0.2
2,162,502 + -0.3
2,162,502 + +0.1
2,162,502 + +0.3
2,162,503 - -0.4
2,162,503 - +0.8
2,162,503 - +0.4
2,162,540 + -0.0
2,162,541 - -0.1
2,162,648 + +0.9
2,162,648 + -0.9
2,162,648 + +1.0
2,162,648 + -0.0
2,162,648 + +0.7
2,162,648 + +0.2
2,162,648 + +0.2
2,162,648 + -0.0
2,162,648 + -0.1
2,162,648 + -0.0
2,162,648 + +0.5
2,162,648 + -1.3
2,162,648 + -0.5
2,162,648 + +0.4
2,162,648 + -0.2
2,162,648 + -0.3
2,162,649 - -1.7
2,162,649 - -0.5
2,162,649 - -0.0
2,162,649 - +0.4
2,162,649 - -0.2
2,162,649 - +0.4
2,162,795 + A4249_RS10760 0.30 -0.7
2,162,795 + A4249_RS10760 0.30 -0.1
2,162,795 + A4249_RS10760 0.30 +1.2
2,162,796 - A4249_RS10760 0.31 +0.2
2,162,796 - A4249_RS10760 0.31 -1.7
2,162,796 - A4249_RS10760 0.31 +0.2
2,162,796 - A4249_RS10760 0.31 -1.1
2,162,796 - A4249_RS10760 0.31 -1.1
2,162,834 + A4249_RS10760 0.38 -0.4
2,162,834 + A4249_RS10760 0.38 +0.9
2,162,834 + A4249_RS10760 0.38 +0.3
2,162,834 + A4249_RS10760 0.38 -0.2
2,162,834 + A4249_RS10760 0.38 -1.1
2,162,834 + A4249_RS10760 0.38 +0.1
2,162,834 + A4249_RS10760 0.38 +0.1
2,162,834 + A4249_RS10760 0.38 -0.3
2,162,834 + A4249_RS10760 0.38 +0.3
2,162,834 + A4249_RS10760 0.38 -0.3
2,162,834 + A4249_RS10760 0.38 +0.7
2,162,835 - A4249_RS10760 0.38 +0.8
2,162,835 - A4249_RS10760 0.38 -0.1
2,162,835 - A4249_RS10760 0.38 +0.9
2,162,835 - A4249_RS10760 0.38 -0.3
2,162,835 - A4249_RS10760 0.38 -0.5
2,162,835 - A4249_RS10760 0.38 +0.7
2,162,835 - A4249_RS10760 0.38 -0.9
2,162,835 - A4249_RS10760 0.38 -0.7
2,162,997 - A4249_RS10760 0.70 +0.3
2,163,143 + +0.3
2,163,144 - +0.1
2,163,299 + A4249_RS10765 0.61 +0.7
2,163,299 + A4249_RS10765 0.61 +0.1
2,163,299 + A4249_RS10765 0.61 -0.9
2,163,299 + A4249_RS10765 0.61 +0.5
2,163,300 - A4249_RS10765 0.61 +1.0
2,163,300 - A4249_RS10765 0.61 -0.0
2,163,300 - A4249_RS10765 0.61 +0.3
2,163,300 - A4249_RS10765 0.61 +1.5
2,163,300 - A4249_RS10765 0.61 -0.6
2,163,300 - A4249_RS10765 0.61 +0.2
2,163,300 - A4249_RS10765 0.61 +0.1
2,163,300 - A4249_RS10765 0.61 -1.1
2,163,356 + A4249_RS10765 0.83 +0.8
2,163,432 + +0.6
2,163,433 - +0.4
2,163,491 + A4249_RS10770 0.11 +0.3
2,163,491 + A4249_RS10770 0.11 -0.3
2,163,491 + A4249_RS10770 0.11 +0.2
2,163,492 - A4249_RS10770 0.11 -0.9
2,163,492 - A4249_RS10770 0.11 -0.2
2,163,492 - A4249_RS10770 0.11 +0.4
2,163,492 - A4249_RS10770 0.11 +0.5
2,163,492 - A4249_RS10770 0.11 +0.7
2,163,492 - A4249_RS10770 0.11 +0.2
2,163,492 - A4249_RS10770 0.11 -0.3
2,163,593 + A4249_RS10770 0.23 -0.1
2,163,593 + A4249_RS10770 0.23 +0.9
2,163,593 + A4249_RS10770 0.23 -0.2
2,163,758 + A4249_RS10770 0.42 -0.7
2,163,758 + A4249_RS10770 0.42 -0.9
2,163,758 + A4249_RS10770 0.42 -0.4
2,163,758 + A4249_RS10770 0.42 -0.8
2,163,758 + A4249_RS10770 0.42 -0.7
2,163,759 - A4249_RS10770 0.42 -0.2
2,163,759 - A4249_RS10770 0.42 -0.1
2,163,759 - A4249_RS10770 0.42 -0.1
2,163,759 - A4249_RS10770 0.42 -0.4
2,163,759 - A4249_RS10770 0.42 +0.7
2,163,759 - A4249_RS10770 0.42 +0.0
2,163,759 - A4249_RS10770 0.42 +0.2
2,163,759 - A4249_RS10770 0.42 -1.5
2,163,881 - A4249_RS10770 0.56 -0.4
2,163,881 - A4249_RS10770 0.56 -0.8

Or see this region's nucleotide sequence