Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08060

Experiment: Uracil 0.8921 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS08055 and A4249_RS08060 are separated by 145 nucleotidesA4249_RS08060 and A4249_RS08065 are separated by 81 nucleotidesA4249_RS08065 and A4249_RS16610 are separated by 394 nucleotides A4249_RS08055: A4249_RS08055 - elongation factor G, at 1,611,661 to 1,613,739 _RS08055 A4249_RS08060: A4249_RS08060 - 30S ribosomal protein S7, at 1,613,885 to 1,614,358 _RS08060 A4249_RS08065: A4249_RS08065 - 30S ribosomal protein S12, at 1,614,440 to 1,614,814 _RS08065 A4249_RS16610: A4249_RS16610 - hypothetical protein, at 1,615,209 to 1,615,805 _RS16610 Position (kb) 1613 1614 1615Strain fitness (log2 ratio) -2 -1 0 1at 1613.824 kb on - strandat 1613.824 kb on - strandat 1613.857 kb on - strandat 1614.442 kb on - strandat 1615.113 kb on + strandat 1615.113 kb on + strandat 1615.113 kb on + strandat 1615.113 kb on + strandat 1615.114 kb on - strandat 1615.136 kb on + strandat 1615.137 kb on - strandat 1615.137 kb on - strandat 1615.137 kb on - strandat 1615.335 kb on + strand, within A4249_RS16610at 1615.335 kb on + strand, within A4249_RS16610at 1615.335 kb on + strand, within A4249_RS16610at 1615.335 kb on + strand, within A4249_RS16610at 1615.335 kb on + strand, within A4249_RS16610at 1615.335 kb on + strand, within A4249_RS16610at 1615.335 kb on + strand, within A4249_RS16610at 1615.335 kb on + strand, within A4249_RS16610at 1615.336 kb on - strand, within A4249_RS16610at 1615.336 kb on - strand, within A4249_RS16610at 1615.336 kb on - strand, within A4249_RS16610at 1615.336 kb on - strand, within A4249_RS16610at 1615.336 kb on - strand, within A4249_RS16610at 1615.357 kb on + strand, within A4249_RS16610at 1615.357 kb on + strand, within A4249_RS16610at 1615.357 kb on + strand, within A4249_RS16610at 1615.357 kb on + strand, within A4249_RS16610at 1615.357 kb on + strand, within A4249_RS16610at 1615.357 kb on + strand, within A4249_RS16610at 1615.358 kb on - strand, within A4249_RS16610at 1615.358 kb on - strand, within A4249_RS16610at 1615.358 kb on - strand, within A4249_RS16610at 1615.358 kb on - strand, within A4249_RS16610

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Per-strain Table

Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C)
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1,613,824 - +0.3
1,613,824 - -0.0
1,613,857 - -1.8
1,614,442 - +0.1
1,615,113 + +0.1
1,615,113 + +0.2
1,615,113 + -1.2
1,615,113 + +0.6
1,615,114 - -0.9
1,615,136 + +0.1
1,615,137 - -0.5
1,615,137 - +0.0
1,615,137 - +0.3
1,615,335 + A4249_RS16610 0.21 -0.0
1,615,335 + A4249_RS16610 0.21 -1.2
1,615,335 + A4249_RS16610 0.21 +0.2
1,615,335 + A4249_RS16610 0.21 -0.1
1,615,335 + A4249_RS16610 0.21 -0.9
1,615,335 + A4249_RS16610 0.21 +0.0
1,615,335 + A4249_RS16610 0.21 -1.2
1,615,335 + A4249_RS16610 0.21 -1.9
1,615,336 - A4249_RS16610 0.21 -0.3
1,615,336 - A4249_RS16610 0.21 -0.3
1,615,336 - A4249_RS16610 0.21 +1.1
1,615,336 - A4249_RS16610 0.21 +0.5
1,615,336 - A4249_RS16610 0.21 -1.2
1,615,357 + A4249_RS16610 0.25 -0.2
1,615,357 + A4249_RS16610 0.25 +0.1
1,615,357 + A4249_RS16610 0.25 +0.1
1,615,357 + A4249_RS16610 0.25 +1.0
1,615,357 + A4249_RS16610 0.25 +0.2
1,615,357 + A4249_RS16610 0.25 +0.2
1,615,358 - A4249_RS16610 0.25 -2.4
1,615,358 - A4249_RS16610 0.25 +0.1
1,615,358 - A4249_RS16610 0.25 -0.1
1,615,358 - A4249_RS16610 0.25 -0.6

Or see this region's nucleotide sequence