Experiment: Uracil 0.8921 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS07080 and A4249_RS07085 overlap by 4 nucleotides A4249_RS07085 and A4249_RS07090 are separated by 511 nucleotides
A4249_RS07080: A4249_RS07080 - hypothetical protein, at 1,421,621 to 1,422,301
_RS07080
A4249_RS07085: A4249_RS07085 - hypothetical protein, at 1,422,298 to 1,422,861
_RS07085
A4249_RS07090: A4249_RS07090 - hypothetical protein, at 1,423,373 to 1,423,822
_RS07090
Position (kb)
1422
1423 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1421.332 kb on - strand at 1421.332 kb on - strand at 1421.332 kb on - strand at 1421.332 kb on - strand at 1421.332 kb on - strand at 1421.332 kb on - strand at 1421.332 kb on - strand at 1421.333 kb on + strand at 1421.405 kb on - strand at 1421.679 kb on + strand at 1421.679 kb on + strand at 1421.680 kb on - strand at 1421.680 kb on - strand at 1421.841 kb on + strand, within A4249_RS07080 at 1421.888 kb on + strand, within A4249_RS07080 at 1421.888 kb on + strand, within A4249_RS07080 at 1421.889 kb on - strand, within A4249_RS07080 at 1421.889 kb on - strand, within A4249_RS07080 at 1421.889 kb on - strand, within A4249_RS07080 at 1421.889 kb on - strand, within A4249_RS07080 at 1421.889 kb on - strand, within A4249_RS07080 at 1421.946 kb on - strand, within A4249_RS07080 at 1422.425 kb on + strand, within A4249_RS07085 at 1422.425 kb on + strand, within A4249_RS07085 at 1422.425 kb on + strand, within A4249_RS07085 at 1422.425 kb on + strand, within A4249_RS07085 at 1422.426 kb on - strand, within A4249_RS07085 at 1422.426 kb on - strand, within A4249_RS07085 at 1422.426 kb on - strand, within A4249_RS07085 at 1422.426 kb on - strand, within A4249_RS07085 at 1422.449 kb on + strand, within A4249_RS07085 at 1422.449 kb on + strand, within A4249_RS07085 at 1422.449 kb on + strand, within A4249_RS07085 at 1422.450 kb on - strand, within A4249_RS07085 at 1422.450 kb on - strand, within A4249_RS07085 at 1422.450 kb on - strand, within A4249_RS07085 at 1422.450 kb on - strand, within A4249_RS07085 at 1422.450 kb on - strand, within A4249_RS07085 at 1422.450 kb on - strand, within A4249_RS07085 at 1422.494 kb on + strand, within A4249_RS07085 at 1422.495 kb on - strand, within A4249_RS07085 at 1422.495 kb on - strand, within A4249_RS07085 at 1422.495 kb on - strand, within A4249_RS07085 at 1422.495 kb on - strand, within A4249_RS07085 at 1422.618 kb on + strand, within A4249_RS07085 at 1422.618 kb on + strand, within A4249_RS07085 at 1422.619 kb on - strand, within A4249_RS07085 at 1422.619 kb on - strand, within A4249_RS07085 at 1422.619 kb on - strand, within A4249_RS07085 at 1422.619 kb on - strand, within A4249_RS07085 at 1422.791 kb on + strand, within A4249_RS07085 at 1422.791 kb on + strand, within A4249_RS07085 at 1422.791 kb on + strand, within A4249_RS07085 at 1422.791 kb on + strand, within A4249_RS07085 at 1422.792 kb on - strand, within A4249_RS07085 at 1422.983 kb on + strand at 1422.984 kb on - strand at 1423.008 kb on + strand at 1423.008 kb on + strand at 1423.008 kb on + strand at 1423.008 kb on + strand at 1423.008 kb on + strand at 1423.009 kb on - strand at 1423.009 kb on - strand at 1423.009 kb on - strand at 1423.033 kb on - strand at 1423.035 kb on + strand at 1423.035 kb on + strand at 1423.035 kb on + strand at 1423.036 kb on - strand at 1423.036 kb on - strand at 1423.072 kb on + strand at 1423.073 kb on - strand at 1423.073 kb on - strand at 1423.073 kb on - strand at 1423.073 kb on - strand at 1423.073 kb on - strand at 1423.278 kb on + strand at 1423.279 kb on - strand at 1423.279 kb on - strand at 1423.321 kb on + strand at 1423.321 kb on + strand at 1423.321 kb on + strand at 1423.321 kb on + strand at 1423.321 kb on + strand at 1423.321 kb on + strand at 1423.321 kb on + strand at 1423.321 kb on + strand at 1423.322 kb on - strand at 1423.322 kb on - strand at 1423.322 kb on - strand at 1423.322 kb on - strand at 1423.322 kb on - strand at 1423.322 kb on - strand at 1423.322 kb on - strand at 1423.391 kb on + strand at 1423.391 kb on + strand at 1423.391 kb on + strand at 1423.391 kb on + strand at 1423.391 kb on + strand at 1423.391 kb on + strand at 1423.392 kb on - strand at 1423.730 kb on + strand, within A4249_RS07090 at 1423.731 kb on - strand, within A4249_RS07090 at 1423.731 kb on - strand, within A4249_RS07090 at 1423.731 kb on - strand, within A4249_RS07090 at 1423.744 kb on - strand, within A4249_RS07090 at 1423.744 kb on - strand, within A4249_RS07090 at 1423.793 kb on + strand at 1423.793 kb on + strand at 1423.793 kb on + strand at 1423.793 kb on + strand at 1423.793 kb on + strand at 1423.793 kb on + strand at 1423.794 kb on - strand at 1423.794 kb on - strand at 1423.794 kb on - strand at 1423.794 kb on - strand at 1423.794 kb on - strand at 1423.794 kb on - strand at 1423.794 kb on - strand at 1423.794 kb on - strand at 1423.794 kb on - strand at 1423.794 kb on - strand at 1423.794 kb on - strand at 1423.821 kb on - strand at 1423.861 kb on + strand at 1423.861 kb on + strand at 1423.861 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C) remove 1,421,332 - -0.9 1,421,332 - +0.4 1,421,332 - -0.3 1,421,332 - +0.7 1,421,332 - +0.9 1,421,332 - -0.1 1,421,332 - +0.3 1,421,333 + -0.4 1,421,405 - +0.2 1,421,679 + -0.2 1,421,679 + -0.1 1,421,680 - +0.1 1,421,680 - -1.2 1,421,841 + A4249_RS07080 0.32 -0.2 1,421,888 + A4249_RS07080 0.39 +2.5 1,421,888 + A4249_RS07080 0.39 -0.2 1,421,889 - A4249_RS07080 0.39 +0.7 1,421,889 - A4249_RS07080 0.39 +0.5 1,421,889 - A4249_RS07080 0.39 +0.1 1,421,889 - A4249_RS07080 0.39 +1.0 1,421,889 - A4249_RS07080 0.39 -1.7 1,421,946 - A4249_RS07080 0.48 +0.4 1,422,425 + A4249_RS07085 0.23 -2.2 1,422,425 + A4249_RS07085 0.23 +0.9 1,422,425 + A4249_RS07085 0.23 +1.1 1,422,425 + A4249_RS07085 0.23 +0.4 1,422,426 - A4249_RS07085 0.23 +0.1 1,422,426 - A4249_RS07085 0.23 +0.2 1,422,426 - A4249_RS07085 0.23 +0.8 1,422,426 - A4249_RS07085 0.23 -1.2 1,422,449 + A4249_RS07085 0.27 +0.4 1,422,449 + A4249_RS07085 0.27 +0.9 1,422,449 + A4249_RS07085 0.27 -0.3 1,422,450 - A4249_RS07085 0.27 +0.4 1,422,450 - A4249_RS07085 0.27 -0.8 1,422,450 - A4249_RS07085 0.27 +0.3 1,422,450 - A4249_RS07085 0.27 -0.3 1,422,450 - A4249_RS07085 0.27 -0.5 1,422,450 - A4249_RS07085 0.27 +0.7 1,422,494 + A4249_RS07085 0.35 +1.1 1,422,495 - A4249_RS07085 0.35 +1.1 1,422,495 - A4249_RS07085 0.35 -0.1 1,422,495 - A4249_RS07085 0.35 +0.6 1,422,495 - A4249_RS07085 0.35 +0.2 1,422,618 + A4249_RS07085 0.57 -0.5 1,422,618 + A4249_RS07085 0.57 +0.2 1,422,619 - A4249_RS07085 0.57 +0.4 1,422,619 - A4249_RS07085 0.57 +0.1 1,422,619 - A4249_RS07085 0.57 +0.1 1,422,619 - A4249_RS07085 0.57 +0.3 1,422,791 + A4249_RS07085 0.87 +0.9 1,422,791 + A4249_RS07085 0.87 +0.1 1,422,791 + A4249_RS07085 0.87 -0.6 1,422,791 + A4249_RS07085 0.87 +1.1 1,422,792 - A4249_RS07085 0.88 -0.8 1,422,983 + -0.1 1,422,984 - -0.5 1,423,008 + -0.5 1,423,008 + -0.5 1,423,008 + +0.3 1,423,008 + -0.1 1,423,008 + +0.4 1,423,009 - -0.5 1,423,009 - -0.3 1,423,009 - +0.5 1,423,033 - -1.4 1,423,035 + -0.6 1,423,035 + -1.0 1,423,035 + -0.8 1,423,036 - -0.7 1,423,036 - -0.3 1,423,072 + +0.8 1,423,073 - -0.4 1,423,073 - +0.3 1,423,073 - -0.4 1,423,073 - -0.8 1,423,073 - +0.6 1,423,278 + -0.1 1,423,279 - -1.9 1,423,279 - +0.2 1,423,321 + -0.3 1,423,321 + +0.4 1,423,321 + -0.3 1,423,321 + +0.5 1,423,321 + -0.3 1,423,321 + -1.0 1,423,321 + +0.5 1,423,321 + -1.4 1,423,322 - +0.0 1,423,322 - -0.4 1,423,322 - -0.3 1,423,322 - +0.4 1,423,322 - -0.6 1,423,322 - -0.0 1,423,322 - -1.8 1,423,391 + +0.1 1,423,391 + +0.3 1,423,391 + -0.2 1,423,391 + +0.3 1,423,391 + +0.2 1,423,391 + +0.3 1,423,392 - -0.6 1,423,730 + A4249_RS07090 0.79 -0.6 1,423,731 - A4249_RS07090 0.80 -0.1 1,423,731 - A4249_RS07090 0.80 +0.6 1,423,731 - A4249_RS07090 0.80 -0.2 1,423,744 - A4249_RS07090 0.82 -0.2 1,423,744 - A4249_RS07090 0.82 +0.3 1,423,793 + -0.1 1,423,793 + +0.1 1,423,793 + -0.7 1,423,793 + -0.5 1,423,793 + +1.2 1,423,793 + +0.9 1,423,794 - +0.0 1,423,794 - +0.2 1,423,794 - +0.5 1,423,794 - -0.5 1,423,794 - -0.9 1,423,794 - +0.2 1,423,794 - -1.4 1,423,794 - +0.6 1,423,794 - +0.3 1,423,794 - -0.1 1,423,794 - +0.5 1,423,821 - -2.8 1,423,861 + +1.1 1,423,861 + -0.8 1,423,861 + -1.7
Or see this region's nucleotide sequence