Experiment: Uracil 0.8921 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03800 and A4249_RS03805 are separated by 35 nucleotides A4249_RS03805 and A4249_RS03810 are separated by 87 nucleotides A4249_RS03810 and A4249_RS03815 overlap by 4 nucleotides A4249_RS03815 and A4249_RS03820 are separated by 104 nucleotides A4249_RS03820 and A4249_RS03825 are separated by 51 nucleotides
A4249_RS03800: A4249_RS03800 - enoyl-CoA hydratase-related protein, at 803,093 to 803,992
_RS03800
A4249_RS03805: A4249_RS03805 - TIGR02466 family protein, at 804,028 to 804,639
_RS03805
A4249_RS03810: A4249_RS03810 - biotin carboxylase N-terminal domain-containing protein, at 804,727 to 806,688
_RS03810
A4249_RS03815: A4249_RS03815 - antibiotic biosynthesis monooxygenase, at 806,685 to 806,975
_RS03815
A4249_RS03820: A4249_RS03820 - DUF1489 domain-containing protein, at 807,080 to 807,478
_RS03820
A4249_RS03825: A4249_RS03825 - MATE family efflux transporter, at 807,530 to 808,888
_RS03825
Position (kb) 804
805
806
807 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 804.035 kb on + strand at 804.035 kb on + strand at 804.035 kb on + strand at 804.035 kb on + strand at 804.035 kb on + strand at 804.036 kb on - strand at 804.036 kb on - strand at 804.036 kb on - strand at 804.050 kb on + strand at 804.140 kb on + strand, within A4249_RS03805 at 804.141 kb on - strand, within A4249_RS03805 at 804.255 kb on + strand, within A4249_RS03805 at 804.257 kb on + strand, within A4249_RS03805 at 804.257 kb on + strand, within A4249_RS03805 at 804.257 kb on + strand, within A4249_RS03805 at 804.257 kb on + strand, within A4249_RS03805 at 804.257 kb on + strand, within A4249_RS03805 at 804.257 kb on + strand, within A4249_RS03805 at 804.258 kb on - strand, within A4249_RS03805 at 804.258 kb on - strand, within A4249_RS03805 at 804.258 kb on - strand, within A4249_RS03805 at 804.258 kb on - strand, within A4249_RS03805 at 804.258 kb on - strand, within A4249_RS03805 at 804.258 kb on - strand, within A4249_RS03805 at 804.258 kb on - strand, within A4249_RS03805 at 804.300 kb on + strand, within A4249_RS03805 at 804.300 kb on + strand, within A4249_RS03805 at 804.300 kb on + strand, within A4249_RS03805 at 804.300 kb on + strand, within A4249_RS03805 at 804.301 kb on - strand, within A4249_RS03805 at 804.386 kb on + strand, within A4249_RS03805 at 804.467 kb on + strand, within A4249_RS03805 at 804.474 kb on + strand, within A4249_RS03805 at 804.474 kb on + strand, within A4249_RS03805 at 804.474 kb on + strand, within A4249_RS03805 at 804.474 kb on + strand, within A4249_RS03805 at 804.474 kb on + strand, within A4249_RS03805 at 804.475 kb on - strand, within A4249_RS03805 at 804.475 kb on - strand, within A4249_RS03805 at 804.475 kb on - strand, within A4249_RS03805 at 804.475 kb on - strand, within A4249_RS03805 at 804.475 kb on - strand, within A4249_RS03805 at 804.475 kb on - strand, within A4249_RS03805 at 804.475 kb on - strand, within A4249_RS03805 at 804.475 kb on - strand, within A4249_RS03805 at 804.475 kb on - strand, within A4249_RS03805 at 804.475 kb on - strand, within A4249_RS03805 at 804.476 kb on + strand, within A4249_RS03805 at 804.476 kb on + strand, within A4249_RS03805 at 804.476 kb on + strand, within A4249_RS03805 at 804.477 kb on - strand, within A4249_RS03805 at 804.477 kb on - strand, within A4249_RS03805 at 804.477 kb on - strand, within A4249_RS03805 at 804.605 kb on + strand at 804.605 kb on + strand at 804.605 kb on + strand at 804.605 kb on + strand at 804.605 kb on + strand at 804.605 kb on + strand at 804.606 kb on - strand at 804.606 kb on - strand at 804.606 kb on - strand at 804.606 kb on - strand at 804.651 kb on - strand at 804.820 kb on + strand at 804.821 kb on - strand at 804.905 kb on - strand at 804.905 kb on - strand at 804.971 kb on - strand, within A4249_RS03810 at 804.971 kb on - strand, within A4249_RS03810 at 805.126 kb on + strand, within A4249_RS03810 at 805.330 kb on + strand, within A4249_RS03810 at 805.330 kb on + strand, within A4249_RS03810 at 805.330 kb on + strand, within A4249_RS03810 at 805.330 kb on + strand, within A4249_RS03810 at 805.330 kb on + strand, within A4249_RS03810 at 805.330 kb on + strand, within A4249_RS03810 at 805.330 kb on + strand, within A4249_RS03810 at 805.330 kb on + strand, within A4249_RS03810 at 805.330 kb on + strand, within A4249_RS03810 at 805.330 kb on + strand, within A4249_RS03810 at 805.330 kb on + strand, within A4249_RS03810 at 805.331 kb on - strand, within A4249_RS03810 at 805.331 kb on - strand, within A4249_RS03810 at 805.331 kb on - strand, within A4249_RS03810 at 805.331 kb on - strand, within A4249_RS03810 at 805.399 kb on + strand, within A4249_RS03810 at 805.399 kb on + strand, within A4249_RS03810 at 805.528 kb on + strand, within A4249_RS03810 at 805.528 kb on + strand, within A4249_RS03810 at 805.528 kb on + strand, within A4249_RS03810 at 805.528 kb on + strand, within A4249_RS03810 at 805.528 kb on + strand, within A4249_RS03810 at 805.528 kb on + strand, within A4249_RS03810 at 805.529 kb on - strand, within A4249_RS03810 at 805.529 kb on - strand, within A4249_RS03810 at 805.529 kb on - strand, within A4249_RS03810 at 805.529 kb on - strand, within A4249_RS03810 at 805.529 kb on - strand, within A4249_RS03810 at 805.759 kb on + strand, within A4249_RS03810 at 805.759 kb on + strand, within A4249_RS03810 at 805.759 kb on + strand, within A4249_RS03810 at 805.760 kb on - strand, within A4249_RS03810 at 805.760 kb on - strand, within A4249_RS03810 at 805.760 kb on - strand, within A4249_RS03810 at 805.760 kb on - strand, within A4249_RS03810 at 805.879 kb on + strand, within A4249_RS03810 at 805.879 kb on + strand, within A4249_RS03810 at 805.879 kb on + strand, within A4249_RS03810 at 805.879 kb on + strand, within A4249_RS03810 at 805.879 kb on + strand, within A4249_RS03810 at 805.879 kb on + strand, within A4249_RS03810 at 805.880 kb on - strand, within A4249_RS03810 at 805.880 kb on - strand, within A4249_RS03810 at 805.880 kb on - strand, within A4249_RS03810 at 805.880 kb on - strand, within A4249_RS03810 at 805.880 kb on - strand, within A4249_RS03810 at 805.880 kb on - strand, within A4249_RS03810 at 805.880 kb on - strand, within A4249_RS03810 at 805.880 kb on - strand, within A4249_RS03810 at 805.880 kb on - strand, within A4249_RS03810 at 805.880 kb on - strand, within A4249_RS03810 at 806.203 kb on + strand, within A4249_RS03810 at 806.203 kb on + strand, within A4249_RS03810 at 806.203 kb on + strand, within A4249_RS03810 at 806.204 kb on - strand, within A4249_RS03810 at 806.371 kb on + strand, within A4249_RS03810 at 806.371 kb on + strand, within A4249_RS03810 at 806.514 kb on + strand at 806.514 kb on + strand at 806.515 kb on - strand at 806.564 kb on + strand at 806.565 kb on - strand at 806.565 kb on - strand at 806.686 kb on + strand at 806.686 kb on + strand at 806.686 kb on + strand at 806.686 kb on + strand at 806.687 kb on - strand at 806.687 kb on - strand at 806.687 kb on - strand at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.960 kb on + strand at 806.971 kb on + strand at 806.971 kb on + strand at 806.971 kb on + strand at 806.971 kb on + strand at 806.972 kb on - strand at 806.972 kb on - strand at 806.972 kb on - strand at 806.972 kb on - strand at 806.972 kb on - strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.985 kb on - strand at 807.031 kb on + strand at 807.032 kb on - strand at 807.032 kb on - strand at 807.058 kb on + strand at 807.059 kb on - strand at 807.068 kb on + strand at 807.068 kb on + strand at 807.068 kb on + strand at 807.068 kb on + strand at 807.068 kb on + strand at 807.069 kb on - strand at 807.069 kb on - strand at 807.069 kb on - strand at 807.069 kb on - strand at 807.069 kb on - strand at 807.069 kb on - strand at 807.069 kb on - strand at 807.172 kb on + strand, within A4249_RS03820 at 807.224 kb on + strand, within A4249_RS03820 at 807.377 kb on + strand, within A4249_RS03820 at 807.377 kb on + strand, within A4249_RS03820 at 807.378 kb on - strand, within A4249_RS03820 at 807.477 kb on - strand at 807.477 kb on - strand at 807.477 kb on - strand at 807.477 kb on - strand at 807.628 kb on + strand at 807.628 kb on + strand at 807.628 kb on + strand at 807.628 kb on + strand at 807.628 kb on + strand at 807.629 kb on - strand at 807.629 kb on - strand at 807.629 kb on - strand at 807.629 kb on - strand at 807.629 kb on - strand at 807.668 kb on + strand, within A4249_RS03825 at 807.668 kb on + strand, within A4249_RS03825 at 807.669 kb on - strand, within A4249_RS03825 at 807.669 kb on - strand, within A4249_RS03825 at 807.669 kb on - strand, within A4249_RS03825 at 807.669 kb on - strand, within A4249_RS03825
Per-strain Table
Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C) remove 804,035 + +0.1 804,035 + +0.2 804,035 + -0.4 804,035 + +1.1 804,035 + +0.1 804,036 - +0.5 804,036 - +0.1 804,036 - +0.9 804,050 + -0.1 804,140 + A4249_RS03805 0.18 -0.0 804,141 - A4249_RS03805 0.18 -0.2 804,255 + A4249_RS03805 0.37 +0.7 804,257 + A4249_RS03805 0.37 -0.7 804,257 + A4249_RS03805 0.37 +0.9 804,257 + A4249_RS03805 0.37 -0.7 804,257 + A4249_RS03805 0.37 -0.9 804,257 + A4249_RS03805 0.37 +0.0 804,257 + A4249_RS03805 0.37 -0.4 804,258 - A4249_RS03805 0.38 +0.0 804,258 - A4249_RS03805 0.38 -0.3 804,258 - A4249_RS03805 0.38 +0.5 804,258 - A4249_RS03805 0.38 -0.1 804,258 - A4249_RS03805 0.38 +0.3 804,258 - A4249_RS03805 0.38 -0.3 804,258 - A4249_RS03805 0.38 -0.0 804,300 + A4249_RS03805 0.44 -0.2 804,300 + A4249_RS03805 0.44 +0.5 804,300 + A4249_RS03805 0.44 -0.3 804,300 + A4249_RS03805 0.44 -0.5 804,301 - A4249_RS03805 0.45 +0.4 804,386 + A4249_RS03805 0.58 +0.3 804,467 + A4249_RS03805 0.72 +0.5 804,474 + A4249_RS03805 0.73 -2.3 804,474 + A4249_RS03805 0.73 +0.1 804,474 + A4249_RS03805 0.73 -0.1 804,474 + A4249_RS03805 0.73 -0.2 804,474 + A4249_RS03805 0.73 -0.9 804,475 - A4249_RS03805 0.73 -0.6 804,475 - A4249_RS03805 0.73 -0.2 804,475 - A4249_RS03805 0.73 +0.1 804,475 - A4249_RS03805 0.73 +0.9 804,475 - A4249_RS03805 0.73 +0.1 804,475 - A4249_RS03805 0.73 -0.1 804,475 - A4249_RS03805 0.73 -0.4 804,475 - A4249_RS03805 0.73 +0.1 804,475 - A4249_RS03805 0.73 -1.4 804,475 - A4249_RS03805 0.73 -0.9 804,476 + A4249_RS03805 0.73 -1.5 804,476 + A4249_RS03805 0.73 -0.5 804,476 + A4249_RS03805 0.73 +0.9 804,477 - A4249_RS03805 0.73 -0.1 804,477 - A4249_RS03805 0.73 +0.5 804,477 - A4249_RS03805 0.73 +0.0 804,605 + -0.2 804,605 + -1.0 804,605 + +0.3 804,605 + -1.2 804,605 + -0.5 804,605 + -0.2 804,606 - -0.2 804,606 - -0.6 804,606 - +0.7 804,606 - +0.4 804,651 - +0.2 804,820 + -0.3 804,821 - +0.6 804,905 - +0.6 804,905 - -0.0 804,971 - A4249_RS03810 0.12 -0.3 804,971 - A4249_RS03810 0.12 -0.2 805,126 + A4249_RS03810 0.20 -0.6 805,330 + A4249_RS03810 0.31 -0.8 805,330 + A4249_RS03810 0.31 +0.0 805,330 + A4249_RS03810 0.31 +0.2 805,330 + A4249_RS03810 0.31 -0.9 805,330 + A4249_RS03810 0.31 -0.4 805,330 + A4249_RS03810 0.31 -0.2 805,330 + A4249_RS03810 0.31 -0.6 805,330 + A4249_RS03810 0.31 -0.3 805,330 + A4249_RS03810 0.31 -0.3 805,330 + A4249_RS03810 0.31 -0.5 805,330 + A4249_RS03810 0.31 -0.1 805,331 - A4249_RS03810 0.31 -0.8 805,331 - A4249_RS03810 0.31 -0.2 805,331 - A4249_RS03810 0.31 +0.1 805,331 - A4249_RS03810 0.31 -0.6 805,399 + A4249_RS03810 0.34 +0.0 805,399 + A4249_RS03810 0.34 -0.3 805,528 + A4249_RS03810 0.41 -1.1 805,528 + A4249_RS03810 0.41 -1.1 805,528 + A4249_RS03810 0.41 -0.2 805,528 + A4249_RS03810 0.41 +0.1 805,528 + A4249_RS03810 0.41 +0.2 805,528 + A4249_RS03810 0.41 +0.3 805,529 - A4249_RS03810 0.41 -0.2 805,529 - A4249_RS03810 0.41 +0.0 805,529 - A4249_RS03810 0.41 -0.5 805,529 - A4249_RS03810 0.41 -0.5 805,529 - A4249_RS03810 0.41 -0.2 805,759 + A4249_RS03810 0.53 -0.4 805,759 + A4249_RS03810 0.53 -0.6 805,759 + A4249_RS03810 0.53 -0.3 805,760 - A4249_RS03810 0.53 +0.7 805,760 - A4249_RS03810 0.53 -0.6 805,760 - A4249_RS03810 0.53 -0.5 805,760 - A4249_RS03810 0.53 -0.2 805,879 + A4249_RS03810 0.59 -0.9 805,879 + A4249_RS03810 0.59 -0.0 805,879 + A4249_RS03810 0.59 -0.2 805,879 + A4249_RS03810 0.59 -0.4 805,879 + A4249_RS03810 0.59 -0.3 805,879 + A4249_RS03810 0.59 -0.3 805,880 - A4249_RS03810 0.59 -0.2 805,880 - A4249_RS03810 0.59 +0.2 805,880 - A4249_RS03810 0.59 +0.4 805,880 - A4249_RS03810 0.59 -0.2 805,880 - A4249_RS03810 0.59 +0.2 805,880 - A4249_RS03810 0.59 +0.3 805,880 - A4249_RS03810 0.59 -1.1 805,880 - A4249_RS03810 0.59 -0.2 805,880 - A4249_RS03810 0.59 -0.4 805,880 - A4249_RS03810 0.59 -0.0 806,203 + A4249_RS03810 0.75 -0.7 806,203 + A4249_RS03810 0.75 -0.3 806,203 + A4249_RS03810 0.75 -0.8 806,204 - A4249_RS03810 0.75 -1.0 806,371 + A4249_RS03810 0.84 -0.3 806,371 + A4249_RS03810 0.84 -0.1 806,514 + -0.1 806,514 + -0.5 806,515 - -0.1 806,564 + +0.8 806,565 - -0.1 806,565 - +0.1 806,686 + +1.2 806,686 + -0.7 806,686 + +1.1 806,686 + -2.4 806,687 - -0.4 806,687 - -0.2 806,687 - +0.2 806,872 + A4249_RS03815 0.64 -0.8 806,872 + A4249_RS03815 0.64 +0.4 806,872 + A4249_RS03815 0.64 -3.1 806,872 + A4249_RS03815 0.64 -1.4 806,872 + A4249_RS03815 0.64 -0.2 806,872 + A4249_RS03815 0.64 -0.7 806,872 + A4249_RS03815 0.64 -0.9 806,872 + A4249_RS03815 0.64 -0.7 806,872 + A4249_RS03815 0.64 -0.5 806,873 - A4249_RS03815 0.65 +0.1 806,873 - A4249_RS03815 0.65 +0.3 806,873 - A4249_RS03815 0.65 +1.1 806,873 - A4249_RS03815 0.65 -0.2 806,873 - A4249_RS03815 0.65 -0.2 806,873 - A4249_RS03815 0.65 +1.6 806,873 - A4249_RS03815 0.65 -0.9 806,873 - A4249_RS03815 0.65 -0.1 806,873 - A4249_RS03815 0.65 +1.4 806,873 - A4249_RS03815 0.65 -0.3 806,873 - A4249_RS03815 0.65 +1.0 806,873 - A4249_RS03815 0.65 -0.2 806,873 - A4249_RS03815 0.65 -0.5 806,960 + +1.0 806,971 + -0.6 806,971 + +0.9 806,971 + -0.3 806,971 + +0.1 806,972 - -0.1 806,972 - +0.9 806,972 - -0.4 806,972 - +0.1 806,972 - +0.8 806,975 + +0.3 806,975 + -0.2 806,975 + -0.5 806,975 + -1.7 806,975 + -0.9 806,975 + -0.8 806,975 + -1.2 806,975 + +0.5 806,976 - -0.1 806,976 - +0.2 806,976 - -0.6 806,976 - +0.4 806,976 - -1.6 806,976 - -0.0 806,976 - +0.8 806,976 - -0.4 806,976 - -0.5 806,976 - -1.4 806,976 - +0.7 806,976 - -0.3 806,976 - +0.5 806,985 - -0.7 807,031 + -0.4 807,032 - +0.0 807,032 - +0.2 807,058 + -0.2 807,059 - +0.0 807,068 + -0.3 807,068 + -0.3 807,068 + -1.4 807,068 + -0.2 807,068 + -1.1 807,069 - +0.3 807,069 - +0.7 807,069 - +0.9 807,069 - +0.4 807,069 - -0.3 807,069 - +0.6 807,069 - -0.4 807,172 + A4249_RS03820 0.23 +0.7 807,224 + A4249_RS03820 0.36 +0.2 807,377 + A4249_RS03820 0.74 -0.4 807,377 + A4249_RS03820 0.74 +0.1 807,378 - A4249_RS03820 0.75 +0.1 807,477 - -0.7 807,477 - -0.9 807,477 - -0.4 807,477 - +0.7 807,628 + +1.1 807,628 + -0.1 807,628 + -0.1 807,628 + -0.5 807,628 + -0.3 807,629 - -0.5 807,629 - -0.5 807,629 - -0.1 807,629 - -0.2 807,629 - -0.6 807,668 + A4249_RS03825 0.10 +0.5 807,668 + A4249_RS03825 0.10 -0.5 807,669 - A4249_RS03825 0.10 -0.2 807,669 - A4249_RS03825 0.10 -0.3 807,669 - A4249_RS03825 0.10 -0.2 807,669 - A4249_RS03825 0.10 -0.3
Or see this region's nucleotide sequence