Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03030

Experiment: Uracil 0.8921 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03025 and A4249_RS03030 are separated by 6 nucleotidesA4249_RS03030 and A4249_RS03035 are separated by 9 nucleotides A4249_RS03025: A4249_RS03025 - IMP dehydrogenase, at 640,344 to 641,801 _RS03025 A4249_RS03030: A4249_RS03030 - MAPEG family protein, at 641,808 to 642,203 _RS03030 A4249_RS03035: A4249_RS03035 - RsmB/NOP family class I SAM-dependent RNA methyltransferase, at 642,213 to 643,514 _RS03035 Position (kb) 641 642 643Strain fitness (log2 ratio) -2 -1 0 1at 641.799 kb on + strandat 641.800 kb on - strandat 641.826 kb on + strandat 641.826 kb on + strandat 641.826 kb on + strandat 641.826 kb on + strandat 641.827 kb on - strandat 641.827 kb on - strandat 641.827 kb on - strandat 641.827 kb on - strandat 641.988 kb on + strand, within A4249_RS03030at 641.989 kb on - strand, within A4249_RS03030at 642.078 kb on + strand, within A4249_RS03030at 642.078 kb on + strand, within A4249_RS03030at 642.079 kb on - strand, within A4249_RS03030at 642.079 kb on - strand, within A4249_RS03030at 642.079 kb on - strand, within A4249_RS03030at 642.099 kb on + strand, within A4249_RS03030at 642.099 kb on + strand, within A4249_RS03030at 642.099 kb on + strand, within A4249_RS03030at 642.099 kb on + strand, within A4249_RS03030at 642.099 kb on + strand, within A4249_RS03030at 642.099 kb on + strand, within A4249_RS03030at 642.099 kb on + strand, within A4249_RS03030at 642.099 kb on + strand, within A4249_RS03030at 642.099 kb on + strand, within A4249_RS03030at 642.099 kb on + strand, within A4249_RS03030at 642.099 kb on + strand, within A4249_RS03030at 642.099 kb on + strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.100 kb on - strand, within A4249_RS03030at 642.111 kb on + strand, within A4249_RS03030at 642.112 kb on - strand, within A4249_RS03030at 642.112 kb on - strand, within A4249_RS03030at 642.129 kb on + strand, within A4249_RS03030at 642.129 kb on + strand, within A4249_RS03030at 642.129 kb on + strand, within A4249_RS03030at 642.130 kb on - strand, within A4249_RS03030at 642.130 kb on - strand, within A4249_RS03030at 642.130 kb on - strand, within A4249_RS03030at 642.130 kb on - strand, within A4249_RS03030at 642.130 kb on - strand, within A4249_RS03030at 642.363 kb on + strand, within A4249_RS03035at 642.363 kb on + strand, within A4249_RS03035at 642.363 kb on + strand, within A4249_RS03035at 642.363 kb on + strand, within A4249_RS03035at 642.363 kb on + strand, within A4249_RS03035at 642.364 kb on - strand, within A4249_RS03035at 642.364 kb on - strand, within A4249_RS03035at 642.364 kb on - strand, within A4249_RS03035at 642.364 kb on - strand, within A4249_RS03035at 642.364 kb on - strand, within A4249_RS03035at 642.364 kb on - strand, within A4249_RS03035at 642.364 kb on - strand, within A4249_RS03035at 642.364 kb on - strand, within A4249_RS03035at 642.365 kb on + strand, within A4249_RS03035at 642.365 kb on + strand, within A4249_RS03035at 642.365 kb on + strand, within A4249_RS03035at 642.365 kb on + strand, within A4249_RS03035at 642.365 kb on + strand, within A4249_RS03035at 642.365 kb on + strand, within A4249_RS03035at 642.366 kb on - strand, within A4249_RS03035at 642.366 kb on - strand, within A4249_RS03035at 642.366 kb on - strand, within A4249_RS03035at 642.366 kb on - strand, within A4249_RS03035at 642.366 kb on - strand, within A4249_RS03035at 642.504 kb on + strand, within A4249_RS03035at 642.505 kb on - strand, within A4249_RS03035at 642.698 kb on + strand, within A4249_RS03035at 642.698 kb on + strand, within A4249_RS03035at 642.698 kb on + strand, within A4249_RS03035at 642.698 kb on + strand, within A4249_RS03035at 642.698 kb on + strand, within A4249_RS03035at 642.698 kb on + strand, within A4249_RS03035at 642.699 kb on - strand, within A4249_RS03035at 642.699 kb on - strand, within A4249_RS03035at 642.699 kb on - strand, within A4249_RS03035at 642.699 kb on - strand, within A4249_RS03035at 642.699 kb on - strand, within A4249_RS03035at 642.921 kb on + strand, within A4249_RS03035at 642.921 kb on + strand, within A4249_RS03035at 642.921 kb on + strand, within A4249_RS03035at 642.921 kb on + strand, within A4249_RS03035at 642.980 kb on + strand, within A4249_RS03035at 642.981 kb on - strand, within A4249_RS03035at 642.981 kb on - strand, within A4249_RS03035at 642.981 kb on - strand, within A4249_RS03035at 642.981 kb on - strand, within A4249_RS03035

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Per-strain Table

Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C)
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641,799 + +0.5
641,800 - -0.2
641,826 + -0.1
641,826 + -0.7
641,826 + -0.1
641,826 + +0.1
641,827 - -0.1
641,827 - -1.1
641,827 - -1.2
641,827 - -1.1
641,988 + A4249_RS03030 0.45 -0.3
641,989 - A4249_RS03030 0.46 +0.7
642,078 + A4249_RS03030 0.68 -0.2
642,078 + A4249_RS03030 0.68 -0.3
642,079 - A4249_RS03030 0.68 -0.3
642,079 - A4249_RS03030 0.68 +0.5
642,079 - A4249_RS03030 0.68 -0.3
642,099 + A4249_RS03030 0.73 -1.4
642,099 + A4249_RS03030 0.73 +0.2
642,099 + A4249_RS03030 0.73 +0.0
642,099 + A4249_RS03030 0.73 +0.4
642,099 + A4249_RS03030 0.73 +0.3
642,099 + A4249_RS03030 0.73 +0.3
642,099 + A4249_RS03030 0.73 -0.0
642,099 + A4249_RS03030 0.73 +0.9
642,099 + A4249_RS03030 0.73 -0.6
642,099 + A4249_RS03030 0.73 +0.3
642,099 + A4249_RS03030 0.73 +0.6
642,099 + A4249_RS03030 0.73 +0.0
642,100 - A4249_RS03030 0.74 +1.1
642,100 - A4249_RS03030 0.74 -1.9
642,100 - A4249_RS03030 0.74 -0.0
642,100 - A4249_RS03030 0.74 -0.1
642,100 - A4249_RS03030 0.74 -0.4
642,100 - A4249_RS03030 0.74 +0.9
642,100 - A4249_RS03030 0.74 +0.8
642,100 - A4249_RS03030 0.74 +0.0
642,100 - A4249_RS03030 0.74 +0.8
642,100 - A4249_RS03030 0.74 -1.1
642,100 - A4249_RS03030 0.74 +0.4
642,100 - A4249_RS03030 0.74 -1.2
642,100 - A4249_RS03030 0.74 -0.2
642,111 + A4249_RS03030 0.77 -0.2
642,112 - A4249_RS03030 0.77 -0.3
642,112 - A4249_RS03030 0.77 +1.0
642,129 + A4249_RS03030 0.81 +1.0
642,129 + A4249_RS03030 0.81 -0.1
642,129 + A4249_RS03030 0.81 +1.6
642,130 - A4249_RS03030 0.81 +1.3
642,130 - A4249_RS03030 0.81 +0.6
642,130 - A4249_RS03030 0.81 -0.4
642,130 - A4249_RS03030 0.81 -0.5
642,130 - A4249_RS03030 0.81 +0.4
642,363 + A4249_RS03035 0.12 +0.3
642,363 + A4249_RS03035 0.12 -0.9
642,363 + A4249_RS03035 0.12 +0.2
642,363 + A4249_RS03035 0.12 -0.2
642,363 + A4249_RS03035 0.12 -0.1
642,364 - A4249_RS03035 0.12 -1.8
642,364 - A4249_RS03035 0.12 -0.4
642,364 - A4249_RS03035 0.12 +0.4
642,364 - A4249_RS03035 0.12 -1.0
642,364 - A4249_RS03035 0.12 +0.4
642,364 - A4249_RS03035 0.12 -0.9
642,364 - A4249_RS03035 0.12 -0.5
642,364 - A4249_RS03035 0.12 +0.6
642,365 + A4249_RS03035 0.12 -0.4
642,365 + A4249_RS03035 0.12 +0.1
642,365 + A4249_RS03035 0.12 +0.5
642,365 + A4249_RS03035 0.12 -1.4
642,365 + A4249_RS03035 0.12 +0.4
642,365 + A4249_RS03035 0.12 +0.4
642,366 - A4249_RS03035 0.12 +1.0
642,366 - A4249_RS03035 0.12 -0.0
642,366 - A4249_RS03035 0.12 +0.3
642,366 - A4249_RS03035 0.12 +1.6
642,366 - A4249_RS03035 0.12 +0.8
642,504 + A4249_RS03035 0.22 +0.1
642,505 - A4249_RS03035 0.22 +0.4
642,698 + A4249_RS03035 0.37 +0.1
642,698 + A4249_RS03035 0.37 -0.3
642,698 + A4249_RS03035 0.37 +0.3
642,698 + A4249_RS03035 0.37 -0.2
642,698 + A4249_RS03035 0.37 +1.1
642,698 + A4249_RS03035 0.37 +0.6
642,699 - A4249_RS03035 0.37 +0.5
642,699 - A4249_RS03035 0.37 -0.3
642,699 - A4249_RS03035 0.37 -1.4
642,699 - A4249_RS03035 0.37 +0.0
642,699 - A4249_RS03035 0.37 -0.2
642,921 + A4249_RS03035 0.54 -0.6
642,921 + A4249_RS03035 0.54 +0.4
642,921 + A4249_RS03035 0.54 -0.3
642,921 + A4249_RS03035 0.54 +0.2
642,980 + A4249_RS03035 0.59 +0.1
642,981 - A4249_RS03035 0.59 -0.1
642,981 - A4249_RS03035 0.59 -0.1
642,981 - A4249_RS03035 0.59 +0.7
642,981 - A4249_RS03035 0.59 -0.2

Or see this region's nucleotide sequence