Experiment: Uracil 0.8921 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02810 and A4249_RS02815 are separated by 26 nucleotides A4249_RS02815 and A4249_RS02820 are separated by 0 nucleotides A4249_RS02820 and A4249_RS02825 are separated by 145 nucleotides A4249_RS02825 and A4249_RS02830 are separated by 55 nucleotides
A4249_RS02810: A4249_RS02810 - peptidylprolyl isomerase, at 595,552 to 596,415
_RS02810
A4249_RS02815: A4249_RS02815 - peptidylprolyl isomerase, at 596,442 to 597,317
_RS02815
A4249_RS02820: A4249_RS02820 - Ppx/GppA phosphatase family protein, at 597,318 to 598,418
_RS02820
A4249_RS02825: A4249_RS02825 - heat shock protein HspQ, at 598,564 to 598,872
_RS02825
A4249_RS02830: A4249_RS02830 - phenylalanine 4-monooxygenase, at 598,928 to 599,803
_RS02830
Position (kb) 597
598
599 Strain fitness (log2 ratio) -2
-1
0
1 at 596.449 kb on + strand at 596.450 kb on - strand at 596.632 kb on + strand, within A4249_RS02815 at 596.632 kb on + strand, within A4249_RS02815 at 596.633 kb on - strand, within A4249_RS02815 at 596.633 kb on - strand, within A4249_RS02815 at 596.770 kb on - strand, within A4249_RS02815 at 596.941 kb on + strand, within A4249_RS02815 at 596.941 kb on + strand, within A4249_RS02815 at 596.941 kb on + strand, within A4249_RS02815 at 596.941 kb on + strand, within A4249_RS02815 at 596.941 kb on + strand, within A4249_RS02815 at 596.941 kb on + strand, within A4249_RS02815 at 596.942 kb on - strand, within A4249_RS02815 at 596.942 kb on - strand, within A4249_RS02815 at 596.942 kb on - strand, within A4249_RS02815 at 596.942 kb on - strand, within A4249_RS02815 at 596.942 kb on - strand, within A4249_RS02815 at 596.942 kb on - strand, within A4249_RS02815 at 596.942 kb on - strand, within A4249_RS02815 at 596.942 kb on - strand, within A4249_RS02815 at 596.943 kb on + strand, within A4249_RS02815 at 596.943 kb on + strand, within A4249_RS02815 at 596.943 kb on + strand, within A4249_RS02815 at 596.943 kb on + strand, within A4249_RS02815 at 596.943 kb on + strand, within A4249_RS02815 at 596.944 kb on - strand, within A4249_RS02815 at 596.944 kb on - strand, within A4249_RS02815 at 597.024 kb on + strand, within A4249_RS02815 at 597.024 kb on + strand, within A4249_RS02815 at 597.024 kb on + strand, within A4249_RS02815 at 597.025 kb on - strand, within A4249_RS02815 at 597.043 kb on + strand, within A4249_RS02815 at 597.045 kb on + strand, within A4249_RS02815 at 597.045 kb on + strand, within A4249_RS02815 at 597.045 kb on + strand, within A4249_RS02815 at 597.045 kb on + strand, within A4249_RS02815 at 597.045 kb on + strand, within A4249_RS02815 at 597.045 kb on + strand, within A4249_RS02815 at 597.046 kb on - strand, within A4249_RS02815 at 597.046 kb on - strand, within A4249_RS02815 at 597.046 kb on - strand, within A4249_RS02815 at 597.046 kb on - strand, within A4249_RS02815 at 597.095 kb on - strand, within A4249_RS02815 at 597.289 kb on + strand at 597.289 kb on + strand at 597.289 kb on + strand at 597.290 kb on - strand at 597.290 kb on - strand at 597.628 kb on + strand, within A4249_RS02820 at 597.785 kb on - strand, within A4249_RS02820 at 598.168 kb on + strand, within A4249_RS02820 at 598.168 kb on + strand, within A4249_RS02820 at 598.169 kb on - strand, within A4249_RS02820 at 598.169 kb on - strand, within A4249_RS02820 at 598.327 kb on + strand at 598.327 kb on + strand at 598.327 kb on + strand at 598.328 kb on - strand at 598.471 kb on - strand at 598.553 kb on + strand at 598.553 kb on + strand at 598.553 kb on + strand at 598.553 kb on + strand at 598.554 kb on - strand at 598.554 kb on - strand at 598.554 kb on - strand at 598.660 kb on + strand, within A4249_RS02825 at 598.660 kb on + strand, within A4249_RS02825 at 598.660 kb on + strand, within A4249_RS02825 at 598.660 kb on + strand, within A4249_RS02825 at 598.661 kb on - strand, within A4249_RS02825 at 598.661 kb on - strand, within A4249_RS02825 at 598.661 kb on - strand, within A4249_RS02825 at 598.711 kb on + strand, within A4249_RS02825 at 598.711 kb on + strand, within A4249_RS02825 at 598.711 kb on + strand, within A4249_RS02825 at 598.712 kb on - strand, within A4249_RS02825 at 598.900 kb on + strand at 598.900 kb on + strand at 598.900 kb on + strand at 598.922 kb on + strand at 598.922 kb on + strand at 598.922 kb on + strand at 598.922 kb on + strand at 598.923 kb on - strand at 598.923 kb on - strand at 598.923 kb on - strand at 598.923 kb on - strand at 598.923 kb on - strand at 598.923 kb on - strand at 598.923 kb on - strand at 598.923 kb on - strand at 598.923 kb on - strand at 599.009 kb on + strand at 599.010 kb on - strand at 599.010 kb on - strand at 599.010 kb on - strand at 599.045 kb on + strand, within A4249_RS02830 at 599.046 kb on - strand, within A4249_RS02830 at 599.046 kb on - strand, within A4249_RS02830 at 599.046 kb on - strand, within A4249_RS02830 at 599.103 kb on + strand, within A4249_RS02830 at 599.104 kb on - strand, within A4249_RS02830 at 599.291 kb on + strand, within A4249_RS02830 at 599.291 kb on + strand, within A4249_RS02830 at 599.291 kb on + strand, within A4249_RS02830 at 599.291 kb on + strand, within A4249_RS02830 at 599.292 kb on - strand, within A4249_RS02830 at 599.292 kb on - strand, within A4249_RS02830 at 599.292 kb on - strand, within A4249_RS02830 at 599.292 kb on - strand, within A4249_RS02830 at 599.366 kb on + strand, within A4249_RS02830 at 599.366 kb on + strand, within A4249_RS02830 at 599.366 kb on + strand, within A4249_RS02830 at 599.366 kb on + strand, within A4249_RS02830 at 599.366 kb on + strand, within A4249_RS02830 at 599.366 kb on + strand, within A4249_RS02830 at 599.366 kb on + strand, within A4249_RS02830 at 599.366 kb on + strand, within A4249_RS02830 at 599.366 kb on + strand, within A4249_RS02830 at 599.366 kb on + strand, within A4249_RS02830 at 599.366 kb on + strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.367 kb on - strand, within A4249_RS02830 at 599.368 kb on + strand, within A4249_RS02830 at 599.368 kb on + strand, within A4249_RS02830 at 599.368 kb on + strand, within A4249_RS02830 at 599.368 kb on + strand, within A4249_RS02830 at 599.368 kb on + strand, within A4249_RS02830 at 599.368 kb on + strand, within A4249_RS02830 at 599.369 kb on - strand, within A4249_RS02830 at 599.378 kb on + strand, within A4249_RS02830 at 599.378 kb on + strand, within A4249_RS02830 at 599.379 kb on - strand, within A4249_RS02830 at 599.379 kb on - strand, within A4249_RS02830 at 599.379 kb on - strand, within A4249_RS02830 at 599.379 kb on - strand, within A4249_RS02830
Per-strain Table
Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C) remove 596,449 + -0.1 596,450 - +0.9 596,632 + A4249_RS02815 0.22 +0.6 596,632 + A4249_RS02815 0.22 +0.8 596,633 - A4249_RS02815 0.22 +1.2 596,633 - A4249_RS02815 0.22 +0.0 596,770 - A4249_RS02815 0.37 -0.8 596,941 + A4249_RS02815 0.57 +0.2 596,941 + A4249_RS02815 0.57 +0.5 596,941 + A4249_RS02815 0.57 -0.2 596,941 + A4249_RS02815 0.57 -0.3 596,941 + A4249_RS02815 0.57 -1.4 596,941 + A4249_RS02815 0.57 +0.2 596,942 - A4249_RS02815 0.57 -0.2 596,942 - A4249_RS02815 0.57 +0.3 596,942 - A4249_RS02815 0.57 -1.3 596,942 - A4249_RS02815 0.57 -0.1 596,942 - A4249_RS02815 0.57 -0.0 596,942 - A4249_RS02815 0.57 -0.4 596,942 - A4249_RS02815 0.57 -0.8 596,942 - A4249_RS02815 0.57 +0.0 596,943 + A4249_RS02815 0.57 -0.1 596,943 + A4249_RS02815 0.57 -0.6 596,943 + A4249_RS02815 0.57 -0.4 596,943 + A4249_RS02815 0.57 -0.3 596,943 + A4249_RS02815 0.57 -0.3 596,944 - A4249_RS02815 0.57 -0.0 596,944 - A4249_RS02815 0.57 +0.3 597,024 + A4249_RS02815 0.66 -0.5 597,024 + A4249_RS02815 0.66 +0.7 597,024 + A4249_RS02815 0.66 +0.8 597,025 - A4249_RS02815 0.67 -0.2 597,043 + A4249_RS02815 0.69 -1.8 597,045 + A4249_RS02815 0.69 +0.1 597,045 + A4249_RS02815 0.69 -0.3 597,045 + A4249_RS02815 0.69 +0.0 597,045 + A4249_RS02815 0.69 +0.1 597,045 + A4249_RS02815 0.69 +0.3 597,045 + A4249_RS02815 0.69 +1.6 597,046 - A4249_RS02815 0.69 -0.3 597,046 - A4249_RS02815 0.69 +0.6 597,046 - A4249_RS02815 0.69 -0.6 597,046 - A4249_RS02815 0.69 -0.2 597,095 - A4249_RS02815 0.75 -0.1 597,289 + -0.9 597,289 + +1.2 597,289 + -0.0 597,290 - +0.1 597,290 - -0.1 597,628 + A4249_RS02820 0.28 -0.5 597,785 - A4249_RS02820 0.42 -1.5 598,168 + A4249_RS02820 0.77 -1.3 598,168 + A4249_RS02820 0.77 +0.6 598,169 - A4249_RS02820 0.77 +0.8 598,169 - A4249_RS02820 0.77 -0.4 598,327 + -0.4 598,327 + -0.1 598,327 + -0.4 598,328 - +0.4 598,471 - -0.1 598,553 + -0.1 598,553 + -0.2 598,553 + -0.2 598,553 + +0.2 598,554 - +0.0 598,554 - +0.0 598,554 - +0.1 598,660 + A4249_RS02825 0.31 -1.9 598,660 + A4249_RS02825 0.31 +0.2 598,660 + A4249_RS02825 0.31 -0.4 598,660 + A4249_RS02825 0.31 +0.2 598,661 - A4249_RS02825 0.31 +0.2 598,661 - A4249_RS02825 0.31 -0.2 598,661 - A4249_RS02825 0.31 -0.3 598,711 + A4249_RS02825 0.48 -1.2 598,711 + A4249_RS02825 0.48 +0.2 598,711 + A4249_RS02825 0.48 +1.4 598,712 - A4249_RS02825 0.48 +0.0 598,900 + -0.8 598,900 + +0.3 598,900 + -0.8 598,922 + +0.4 598,922 + +0.2 598,922 + -1.4 598,922 + +0.5 598,923 - +0.9 598,923 - -0.2 598,923 - +1.0 598,923 - -2.2 598,923 - +0.0 598,923 - -0.2 598,923 - +0.3 598,923 - +0.1 598,923 - +0.4 599,009 + +0.3 599,010 - +0.3 599,010 - +0.4 599,010 - -0.3 599,045 + A4249_RS02830 0.13 +0.7 599,046 - A4249_RS02830 0.13 +0.6 599,046 - A4249_RS02830 0.13 -0.1 599,046 - A4249_RS02830 0.13 -0.6 599,103 + A4249_RS02830 0.20 -0.3 599,104 - A4249_RS02830 0.20 +0.0 599,291 + A4249_RS02830 0.41 -0.2 599,291 + A4249_RS02830 0.41 -2.1 599,291 + A4249_RS02830 0.41 -1.2 599,291 + A4249_RS02830 0.41 +0.1 599,292 - A4249_RS02830 0.42 +0.1 599,292 - A4249_RS02830 0.42 -0.5 599,292 - A4249_RS02830 0.42 -0.3 599,292 - A4249_RS02830 0.42 -0.1 599,366 + A4249_RS02830 0.50 -0.5 599,366 + A4249_RS02830 0.50 +0.0 599,366 + A4249_RS02830 0.50 -0.6 599,366 + A4249_RS02830 0.50 -0.7 599,366 + A4249_RS02830 0.50 +0.2 599,366 + A4249_RS02830 0.50 -0.1 599,366 + A4249_RS02830 0.50 -1.1 599,366 + A4249_RS02830 0.50 -0.2 599,366 + A4249_RS02830 0.50 -1.1 599,366 + A4249_RS02830 0.50 -0.2 599,366 + A4249_RS02830 0.50 -0.3 599,367 - A4249_RS02830 0.50 -0.4 599,367 - A4249_RS02830 0.50 -1.0 599,367 - A4249_RS02830 0.50 -0.2 599,367 - A4249_RS02830 0.50 -0.1 599,367 - A4249_RS02830 0.50 -0.4 599,367 - A4249_RS02830 0.50 +0.0 599,367 - A4249_RS02830 0.50 -0.1 599,367 - A4249_RS02830 0.50 +0.8 599,367 - A4249_RS02830 0.50 +0.2 599,367 - A4249_RS02830 0.50 -0.2 599,367 - A4249_RS02830 0.50 +0.2 599,367 - A4249_RS02830 0.50 +0.7 599,367 - A4249_RS02830 0.50 +0.3 599,368 + A4249_RS02830 0.50 +1.0 599,368 + A4249_RS02830 0.50 -0.4 599,368 + A4249_RS02830 0.50 +0.5 599,368 + A4249_RS02830 0.50 -0.6 599,368 + A4249_RS02830 0.50 -0.1 599,368 + A4249_RS02830 0.50 +0.3 599,369 - A4249_RS02830 0.50 +0.3 599,378 + A4249_RS02830 0.51 +0.6 599,378 + A4249_RS02830 0.51 -0.4 599,379 - A4249_RS02830 0.51 +0.4 599,379 - A4249_RS02830 0.51 -1.5 599,379 - A4249_RS02830 0.51 +0.8 599,379 - A4249_RS02830 0.51 +0.1
Or see this region's nucleotide sequence