Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS20860

Experiment: polygalacturonic (ultrapure); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic (ultrapure); filtered 2.5 mg/ml (C)
5,137,258	-		ABI39_RS20850	0.61	+0.2
5,137,387	+				-1.1
5,137,396	+				-0.7
5,137,433	-				-1.2
5,137,505	+				+0.0
5,137,508	-				-0.3
5,137,545	-				+0.1
5,137,555	-				-0.1
5,137,572	-				-0.6
5,137,592	+				+0.3
5,137,847	-		ABI39_RS20855	0.53	+0.2
5,137,956	-		ABI39_RS20855	0.78	+0.9
5,138,056	-				+0.2
5,138,104	-				-0.8
5,138,228	+				+0.3
5,138,229	-				+0.4
5,138,300	+		ABI39_RS20860	0.13	-1.7
5,138,428	-		ABI39_RS20860	0.38	+0.4
5,138,733	+				-1.7
5,139,139	+				-0.5
5,139,141	+				-0.1
5,139,152	+		ABI39_RS22930	0.15	-2.6
5,139,153	-		ABI39_RS22930	0.16	-0.7
5,139,229	+		ABI39_RS22930	0.71	-0.0
5,139,396	+		ABI39_RS20870	0.31	+0.3
5,139,408	+		ABI39_RS20870	0.34	+0.4
5,139,473	+		ABI39_RS20870	0.50	-0.1
5,139,474	-		ABI39_RS20870	0.50	+0.7
5,139,477	+		ABI39_RS20870	0.50	+0.4
5,139,477	+		ABI39_RS20870	0.50	+0.2
5,139,478	-		ABI39_RS20870	0.51	+1.3
5,139,479	+		ABI39_RS20870	0.51	+0.3
5,139,484	+		ABI39_RS20870	0.52	+0.5
5,139,484	+		ABI39_RS20870	0.52	+0.6
5,139,485	-		ABI39_RS20870	0.52	-0.2
5,139,488	+		ABI39_RS20870	0.53	-0.0
5,139,488	+		ABI39_RS20870	0.53	-1.1
5,139,666	+				+0.3
5,139,668	+				-1.0
5,139,668	+				+0.3
5,139,682	+				-0.5
5,139,694	+				+0.4
5,139,700	+				-0.1