Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10650

Experiment: polygalacturonic (ultrapure); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic (ultrapure); filtered 2.5 mg/ml (C)
2,840,218	-				-1.9
2,840,294	-				+0.2
2,840,294	-				+1.1
2,840,369	-				-0.4
2,840,425	-				+1.0
2,840,586	+		ABI39_RS10650	0.14	-1.0
2,840,606	+		ABI39_RS10650	0.15	-2.5
2,840,842	-		ABI39_RS10650	0.28	-1.2
2,840,871	+		ABI39_RS10650	0.30	-2.3
2,840,892	-		ABI39_RS10650	0.31	-1.7
2,840,892	-		ABI39_RS10650	0.31	-2.9
2,840,908	+		ABI39_RS10650	0.32	-4.9
2,840,909	-		ABI39_RS10650	0.32	-2.2
2,840,927	-		ABI39_RS10650	0.33	-2.4
2,840,945	+		ABI39_RS10650	0.34	-1.1
2,840,946	-		ABI39_RS10650	0.34	-0.2
2,841,135	-		ABI39_RS10650	0.45	-0.9
2,841,175	+		ABI39_RS10650	0.47	-2.7
2,841,176	-		ABI39_RS10650	0.47	-2.3
2,841,197	+		ABI39_RS10650	0.49	-2.0
2,841,233	+		ABI39_RS10650	0.51	-3.3
2,841,236	-		ABI39_RS10650	0.51	-1.1
2,841,244	-		ABI39_RS10650	0.51	-1.1
2,841,258	+		ABI39_RS10650	0.52	-2.0
2,841,330	+		ABI39_RS10650	0.56	-2.2
2,841,330	+		ABI39_RS10650	0.56	-2.6
2,841,345	+		ABI39_RS10650	0.57	-2.3
2,841,346	-		ABI39_RS10650	0.57	-1.6
2,841,346	-		ABI39_RS10650	0.57	-1.8
2,841,350	+		ABI39_RS10650	0.57	-1.8
2,841,351	-		ABI39_RS10650	0.57	-1.0
2,841,351	-		ABI39_RS10650	0.57	-2.3
2,841,369	+		ABI39_RS10650	0.58	-2.7
2,841,429	+		ABI39_RS10650	0.62	-2.0
2,841,504	+		ABI39_RS10650	0.66	-1.8
2,841,518	-		ABI39_RS10650	0.67	-0.6
2,841,583	-		ABI39_RS10650	0.71	-0.9
2,841,615	+		ABI39_RS10650	0.72	-0.6
2,841,708	+		ABI39_RS10650	0.78	-1.7
2,841,726	+		ABI39_RS10650	0.79	-3.2
2,841,727	-		ABI39_RS10650	0.79	-1.6
2,841,841	-		ABI39_RS10650	0.85	-1.1
2,841,846	+		ABI39_RS10650	0.86	-2.5
2,841,942	-				-1.7
2,842,124	-				-0.1
2,842,128	+				-2.5
2,842,426	+				+0.2
2,842,509	-				+0.5
2,842,511	-				-0.2
2,842,515	-				+0.0
2,842,518	+				-0.2
2,842,518	+				+0.5
2,842,519	-				-0.1
2,842,530	+				-0.3
2,842,532	+				+0.8
2,842,532	+				-0.5
2,842,532	+				+0.2
2,842,534	+				+0.4
2,842,534	+				+0.1
2,842,541	-				+0.4
2,842,552	+				-0.1
2,842,558	+				+0.1
2,842,559	-				-1.7
2,842,559	-				-0.5
2,842,562	+				-0.3
2,842,562	+				+0.4
2,842,562	+				+0.1
2,842,563	-				-1.0
2,842,596	-				-0.1
2,842,698	-				-0.5
2,842,736	-				+0.5
2,842,757	+				-0.0
2,842,901	-				-0.1
2,842,901	-				-0.3
2,842,942	-				-0.2
2,842,974	-				-0.0
2,842,974	-				-0.2
2,843,023	+				+0.8
2,843,023	+				+0.5
2,843,023	+				+0.0
2,843,059	-				-1.0