Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10440

Experiment: polygalacturonic (ultrapure); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic (ultrapure); filtered 2.5 mg/ml (C)
2,792,316	+		ABI39_RS10435	0.28	-3.4
2,792,400	-		ABI39_RS10435	0.35	-4.6
2,792,424	-		ABI39_RS10435	0.37	-4.8
2,792,545	-		ABI39_RS10435	0.47	-4.5
2,792,545	-		ABI39_RS10435	0.47	-2.4
2,792,629	-		ABI39_RS10435	0.54	-4.1
2,792,687	-		ABI39_RS10435	0.58	-3.8
2,792,696	+		ABI39_RS10435	0.59	-2.7
2,792,750	-		ABI39_RS10435	0.64	-5.2
2,792,795	-		ABI39_RS10435	0.67	-3.4
2,792,796	+		ABI39_RS10435	0.67	-3.4
2,792,800	-		ABI39_RS10435	0.68	-2.9
2,792,951	+		ABI39_RS10435	0.80	-5.6
2,792,963	-		ABI39_RS10435	0.81	-3.1
2,793,022	-		ABI39_RS10435	0.86	-3.9
2,793,073	+				-3.3
2,793,074	-				-2.4
2,793,087	-				-3.2
2,793,187	+				+0.0
2,793,597	+		ABI39_RS10440	0.24	-4.4
2,793,598	-		ABI39_RS10440	0.24	-5.0
2,793,738	+		ABI39_RS10440	0.35	-5.9
2,793,748	+		ABI39_RS10440	0.36	-4.4
2,793,749	-		ABI39_RS10440	0.36	-4.7
2,793,961	+		ABI39_RS10440	0.52	-3.2
2,794,025	+		ABI39_RS10440	0.57	-3.8
2,794,323	-		ABI39_RS10440	0.80	-3.5
2,794,527	+				-4.3
2,794,680	-				+0.1
2,794,801	-				+0.3
2,794,964	-				+0.5
2,795,025	-				-0.6
2,795,084	-				-0.3
2,795,290	-		ABI39_RS10450	0.14	-1.1
2,795,316	+		ABI39_RS10450	0.16	+0.8
2,795,387	+		ABI39_RS10450	0.23	-0.1
2,795,402	+		ABI39_RS10450	0.25	-0.1
2,795,527	+		ABI39_RS10450	0.37	-0.1