Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS07420

Experiment: polygalacturonic (ultrapure); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic (ultrapure); filtered 2.5 mg/ml (C)
2,024,100	+		ABI39_RS07410	0.23	-0.5
2,024,177	-		ABI39_RS07410	0.38	+0.4
2,024,220	+		ABI39_RS07410	0.47	-0.2
2,024,240	-		ABI39_RS07410	0.51	+0.7
2,024,240	-		ABI39_RS07410	0.51	+0.4
2,024,244	-		ABI39_RS07410	0.52	-0.9
2,024,283	-		ABI39_RS07410	0.60	-0.2
2,024,283	-		ABI39_RS07410	0.60	-0.0
2,024,392	-		ABI39_RS07410	0.83	-2.5
2,024,418	-		ABI39_RS07410	0.88	-1.8
2,024,448	-				+0.3
2,024,516	+				+0.2
2,024,518	+				+0.4
2,024,518	+				+0.6
2,024,519	-				-1.1
2,024,652	-		ABI39_RS07415	0.29	-0.1
2,025,012	+				+0.0
2,025,013	-				-2.4
2,025,273	+		ABI39_RS07420	0.13	-1.2
2,025,273	+		ABI39_RS07420	0.13	-0.6
2,025,273	+		ABI39_RS07420	0.13	-1.6
2,025,274	-		ABI39_RS07420	0.13	-0.9