Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS21075

Experiment: polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)
5,186,730	+		ABI39_RS21065	0.66	-2.9
5,186,730	+		ABI39_RS21065	0.66	-2.4
5,186,731	-		ABI39_RS21065	0.67	-3.0
5,186,993	-				-2.2
5,187,746	+		ABI39_RS21075	0.16	-0.6
5,188,014	+		ABI39_RS21075	0.51	-2.2
5,188,134	+		ABI39_RS21075	0.66	-4.7
5,188,135	-		ABI39_RS21075	0.66	-1.8
5,188,142	-		ABI39_RS21075	0.67	-2.0
5,188,197	+		ABI39_RS21075	0.74	-3.5
5,188,468	+				+1.0
5,188,475	+				-0.2
5,188,481	+				+0.2
5,188,482	-				-0.4
5,188,482	-				+1.4
5,188,490	-				+0.2
5,188,597	+				-0.5
5,188,710	+				-0.7
5,188,716	-				+0.4
5,188,731	-				+0.7
5,188,889	+				+0.2
5,188,890	-				-2.5
5,188,894	+				-0.2
5,188,895	-				+0.2
5,188,903	-				-0.2
5,188,903	-				-1.6
5,188,908	-				-0.3
5,188,909	+				+1.8
5,188,912	-				-0.0
5,188,918	-				-0.8
5,189,035	-				+0.8
5,189,103	+				-1.1
5,189,177	-		ABI39_RS21080	0.11	-0.4
5,189,302	-		ABI39_RS21080	0.23	+0.4
5,189,307	+		ABI39_RS21080	0.23	-0.1
5,189,359	-		ABI39_RS21080	0.28	+0.5