Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS15920

Experiment: polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)
4,086,276	-		ABI39_RS15915	0.44	+0.2
4,086,354	-		ABI39_RS15915	0.49	+2.4
4,086,479	+		ABI39_RS15915	0.58	+0.0
4,086,480	-		ABI39_RS15915	0.58	-0.1
4,086,503	+		ABI39_RS15915	0.59	-0.5
4,086,504	-		ABI39_RS15915	0.59	+0.4
4,086,545	+		ABI39_RS15915	0.62	+0.0
4,086,614	-		ABI39_RS15915	0.67	-2.6
4,086,679	+		ABI39_RS15915	0.71	-0.4
4,086,680	-		ABI39_RS15915	0.71	+0.3
4,086,685	-		ABI39_RS15915	0.71	-1.0
4,086,759	+		ABI39_RS15915	0.76	-0.6
4,086,924	+		ABI39_RS15915	0.87	-0.3
4,087,026	+				+0.1
4,087,031	+				-0.7
4,087,032	-				+0.1
4,087,032	-				-0.1
4,087,117	-				+0.2
4,087,133	+				-0.1
4,087,149	+				-0.1
4,087,332	+		ABI39_RS15920	0.24	-1.4
4,087,417	-		ABI39_RS15920	0.53	+1.4
4,087,430	+		ABI39_RS15920	0.57	-0.7
4,087,430	+		ABI39_RS15920	0.57	-1.9
4,087,763	+		ABI39_RS15925	0.53	+0.3
4,087,763	+		ABI39_RS15925	0.53	-0.2
4,087,840	+		ABI39_RS15925	0.74	+0.3
4,087,840	+		ABI39_RS15925	0.74	+0.4
4,087,951	-				-1.0
4,087,986	+				-0.3
4,088,027	+				-0.4
4,088,053	+				+2.0
4,088,054	-				-0.5
4,088,163	+				+1.1
4,088,260	-		ABI39_RS15930	0.25	+0.3
4,088,329	-		ABI39_RS15930	0.36	-0.5
4,088,385	+		ABI39_RS15930	0.45	-0.9