Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS14250

Experiment: polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)
3,703,026	+		ABI39_RS14245	0.39	-0.9
3,703,095	+		ABI39_RS14245	0.44	-1.0
3,703,098	-		ABI39_RS14245	0.44	-1.8
3,703,115	+		ABI39_RS14245	0.46	-1.6
3,703,340	+		ABI39_RS14245	0.63	-1.7
3,703,364	-		ABI39_RS14245	0.65	-1.2
3,703,515	+		ABI39_RS14245	0.77	-0.0
3,703,515	+		ABI39_RS14245	0.77	-0.7
3,703,516	-		ABI39_RS14245	0.77	-1.7
3,703,626	+		ABI39_RS14245	0.86	-0.5
3,703,646	+		ABI39_RS14245	0.87	+0.4
3,703,651	-		ABI39_RS14245	0.88	-1.6
3,703,695	-				-0.3
3,703,784	+				+1.2
3,703,785	-				-0.0
3,703,785	-				-0.5
3,703,788	-				+0.1
3,703,897	-				-0.8
3,704,092	+		ABI39_RS14250	0.22	-1.0
3,704,152	-		ABI39_RS14250	0.28	-0.8
3,704,205	+		ABI39_RS14250	0.32	-1.8
3,704,244	+		ABI39_RS14250	0.36	-0.2
3,704,346	+		ABI39_RS14250	0.44	-0.8
3,704,347	-		ABI39_RS14250	0.45	-1.2
3,704,432	-		ABI39_RS14250	0.52	-1.5
3,704,449	+		ABI39_RS14250	0.53	-1.4
3,704,581	+		ABI39_RS14250	0.65	+0.3
3,704,582	-		ABI39_RS14250	0.65	-1.2
3,704,583	+		ABI39_RS14250	0.65	-1.3
3,704,996	+				-1.9
3,704,998	+				+0.8
3,705,188	-		ABI39_RS14255	0.31	-2.1
3,705,500	+		ABI39_RS14255	0.79	+0.2
3,705,503	-		ABI39_RS14255	0.80	-0.3
3,705,753	+		ABI39_RS14260	0.14	-0.8
3,705,753	+		ABI39_RS14260	0.14	-1.5
3,705,868	+		ABI39_RS14260	0.29	-1.2
3,705,869	-		ABI39_RS14260	0.29	+0.1
3,705,887	-		ABI39_RS14260	0.32	-0.8