Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10460

Experiment: polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)
2,796,544	-		ABI39_RS10455	0.37	-1.0
2,796,604	-		ABI39_RS10455	0.43	-0.2
2,796,637	+		ABI39_RS10455	0.46	-0.9
2,796,638	-		ABI39_RS10455	0.46	-0.3
2,796,638	-		ABI39_RS10455	0.46	-0.6
2,796,706	-		ABI39_RS10455	0.53	+0.2
2,796,717	+		ABI39_RS10455	0.54	-0.4
2,796,717	+		ABI39_RS10455	0.54	-0.0
2,796,762	+		ABI39_RS10455	0.58	-0.8
2,796,838	-		ABI39_RS10455	0.66	+1.3
2,797,002	-		ABI39_RS10455	0.82	-0.2
2,797,034	+		ABI39_RS10455	0.85	+0.8
2,797,035	-		ABI39_RS10455	0.85	+0.6
2,797,159	-				+0.0
2,797,610	-		ABI39_RS10460	0.37	+0.0
2,797,660	-		ABI39_RS10460	0.41	+0.0
2,797,768	-		ABI39_RS10460	0.51	+1.2
2,798,121	+		ABI39_RS10460	0.82	+2.5
2,798,121	+		ABI39_RS10460	0.82	+0.3
2,798,122	-		ABI39_RS10460	0.82	-0.2
2,798,173	+		ABI39_RS10460	0.87	+0.9
2,798,240	+				-0.5
2,798,241	-				-0.6
2,798,291	+				-0.5
2,798,291	+				+0.1
2,798,603	+		ABI39_RS10465	0.20	+0.1
2,798,604	-		ABI39_RS10465	0.20	-1.7
2,798,655	+		ABI39_RS10465	0.24	+0.7
2,798,655	+		ABI39_RS10465	0.24	+2.0
2,798,853	+		ABI39_RS10465	0.38	-2.3
2,798,853	+		ABI39_RS10465	0.38	-0.6
2,798,854	-		ABI39_RS10465	0.38	-0.9
2,798,881	-		ABI39_RS10465	0.40	-0.6
2,798,939	+		ABI39_RS10465	0.44	+0.6
2,799,208	+		ABI39_RS10465	0.63	+0.5
2,799,295	-		ABI39_RS10465	0.69	+0.1