Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS06380

Experiment: polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)
1,772,794	-		ABI39_RS06375	0.16	+0.0
1,772,905	+		ABI39_RS06375	0.27	+1.0
1,772,919	+		ABI39_RS06375	0.28	-0.1
1,772,919	+		ABI39_RS06375	0.28	+0.3
1,772,920	-		ABI39_RS06375	0.28	-0.6
1,773,016	-		ABI39_RS06375	0.38	+0.1
1,773,018	+		ABI39_RS06375	0.38	-0.2
1,773,022	+		ABI39_RS06375	0.39	-0.3
1,773,023	-		ABI39_RS06375	0.39	-0.5
1,773,027	+		ABI39_RS06375	0.39	+0.2
1,773,028	-		ABI39_RS06375	0.39	-1.0
1,773,032	-		ABI39_RS06375	0.40	+0.2
1,773,111	+		ABI39_RS06375	0.47	-0.4
1,773,112	-		ABI39_RS06375	0.47	+0.4
1,773,248	-		ABI39_RS06375	0.61	-0.1
1,773,255	+		ABI39_RS06375	0.62	+0.4
1,773,255	+		ABI39_RS06375	0.62	-0.1
1,773,332	-		ABI39_RS06375	0.69	+0.1
1,773,361	-		ABI39_RS06375	0.72	+1.9
1,773,440	-		ABI39_RS06375	0.80	+0.0
1,773,443	-		ABI39_RS06375	0.80	-0.3
1,773,473	-		ABI39_RS06375	0.83	-0.5
1,773,496	+		ABI39_RS06375	0.85	-1.2
1,773,628	+				-0.5
1,773,663	-				-0.5
1,773,736	+				+1.5
1,773,737	-				-2.6
1,773,740	-				-2.7
1,773,748	-				-1.1
1,773,766	-				-1.5
1,773,810	+				-1.4
1,773,813	+				-1.6
1,773,850	+				-2.1
1,773,880	-				-2.1
1,773,978	-		ABI39_RS06380	0.12	-2.9
1,773,982	-		ABI39_RS06380	0.13	-0.9
1,773,992	-		ABI39_RS06380	0.13	-2.0
1,774,177	+		ABI39_RS06380	0.26	-2.1
1,774,178	-		ABI39_RS06380	0.26	-0.1
1,774,253	-		ABI39_RS06380	0.31	-1.1
1,774,290	+		ABI39_RS06380	0.33	-2.0
1,774,420	-		ABI39_RS06380	0.42	-0.9
1,774,503	-		ABI39_RS06380	0.47	-2.1
1,774,598	-		ABI39_RS06380	0.54	-3.0
1,774,610	-		ABI39_RS06380	0.54	-2.9
1,774,689	-		ABI39_RS06380	0.60	-0.5
1,774,816	-		ABI39_RS06380	0.68	-1.7
1,774,816	-		ABI39_RS06380	0.68	-2.2
1,775,040	-		ABI39_RS06380	0.83	-2.0
1,776,120	-		ABI39_RS06385	0.43	+1.5