Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS06010

Experiment: polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)
1,668,941	-		ABI39_RS06005	0.29	-0.1
1,668,996	+		ABI39_RS06005	0.33	-0.3
1,669,065	-		ABI39_RS06005	0.38	-0.3
1,669,065	-		ABI39_RS06005	0.38	+0.1
1,669,065	-		ABI39_RS06005	0.38	+0.1
1,669,231	-		ABI39_RS06005	0.50	-0.9
1,669,236	+		ABI39_RS06005	0.50	+0.3
1,669,237	+		ABI39_RS06005	0.51	+0.7
1,669,237	-		ABI39_RS06005	0.51	+0.4
1,669,242	+		ABI39_RS06005	0.51	+0.3
1,669,523	-		ABI39_RS06005	0.72	-0.6
1,669,680	-		ABI39_RS06005	0.83	+0.1
1,669,800	-				+0.4
1,669,848	+				+0.0
1,669,898	-				-1.1
1,669,900	-				-0.6
1,669,942	-				-1.7
1,669,997	-		ABI39_RS06010	0.11	-1.9
1,670,060	-		ABI39_RS06010	0.21	-1.1
1,670,068	-		ABI39_RS06010	0.22	-2.4
1,670,164	+		ABI39_RS06010	0.38	-2.0
1,670,165	-		ABI39_RS06010	0.38	-2.1
1,670,249	-		ABI39_RS06010	0.52	-3.0
1,670,286	-		ABI39_RS06010	0.58	-3.4
1,670,384	+		ABI39_RS06010	0.74	-1.5
1,670,387	+		ABI39_RS06010	0.74	-1.2
1,670,388	-		ABI39_RS06010	0.75	-1.4
1,670,388	-		ABI39_RS06010	0.75	-2.5
1,670,568	+				-1.9
1,670,574	+				-1.8
1,670,577	-				-0.3
1,670,639	-				-0.6
1,670,859	-				+0.4