Strain Fitness in Escherichia coli ECRC101 around MCAODC_25315

Experiment: WM_EV240

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_EV240
1,785,989	-	gsiB	MCAODC_25310	0.37	-0.9
1,785,990	+	gsiB	MCAODC_25310	0.37	-1.0
1,786,030	+	gsiB	MCAODC_25310	0.40	+1.6
1,786,030	+	gsiB	MCAODC_25310	0.40	-0.6
1,786,044	+	gsiB	MCAODC_25310	0.40	+0.4
1,786,045	-	gsiB	MCAODC_25310	0.40	-0.6
1,786,082	-	gsiB	MCAODC_25310	0.43	-0.0
1,786,144	+	gsiB	MCAODC_25310	0.47	-0.7
1,786,150	+	gsiB	MCAODC_25310	0.47	-0.9
1,786,150	+	gsiB	MCAODC_25310	0.47	+0.3
1,786,151	-	gsiB	MCAODC_25310	0.47	-1.0
1,786,151	-	gsiB	MCAODC_25310	0.47	+0.2
1,786,151	-	gsiB	MCAODC_25310	0.47	+0.1
1,786,152	+	gsiB	MCAODC_25310	0.47	-1.0
1,786,152	+	gsiB	MCAODC_25310	0.47	+0.1
1,786,153	-	gsiB	MCAODC_25310	0.47	-1.7
1,786,153	-	gsiB	MCAODC_25310	0.47	+0.4
1,786,153	-	gsiB	MCAODC_25310	0.47	-0.2
1,786,163	-	gsiB	MCAODC_25310	0.48	+1.0
1,786,163	-	gsiB	MCAODC_25310	0.48	-0.1
1,786,163	-	gsiB	MCAODC_25310	0.48	-1.3
1,786,163	-	gsiB	MCAODC_25310	0.48	-0.1
1,786,307	+	gsiB	MCAODC_25310	0.58	+0.6
1,786,307	+	gsiB	MCAODC_25310	0.58	+2.6
1,786,307	+	gsiB	MCAODC_25310	0.58	+0.2
1,786,307	+	gsiB	MCAODC_25310	0.58	-0.9
1,786,307	+	gsiB	MCAODC_25310	0.58	-1.2
1,786,308	-	gsiB	MCAODC_25310	0.58	+0.5
1,786,308	-	gsiB	MCAODC_25310	0.58	-0.7
1,786,399	-	gsiB	MCAODC_25310	0.63	+0.3
1,786,399	-	gsiB	MCAODC_25310	0.63	-0.6
1,786,440	+	gsiB	MCAODC_25310	0.66	+0.3
1,786,492	+	gsiB	MCAODC_25310	0.70	+0.8
1,786,493	-	gsiB	MCAODC_25310	0.70	-0.9
1,786,495	+	gsiB	MCAODC_25310	0.70	-0.0
1,786,496	-	gsiB	MCAODC_25310	0.70	-0.7
1,786,525	+	gsiB	MCAODC_25310	0.72	-0.0
1,786,561	+	gsiB	MCAODC_25310	0.74	+1.0
1,786,561	+	gsiB	MCAODC_25310	0.74	+0.6
1,786,567	+	gsiB	MCAODC_25310	0.74	+0.1
1,786,573	+	gsiB	MCAODC_25310	0.75	-0.1
1,786,575	+	gsiB	MCAODC_25310	0.75	+0.8
1,786,576	-	gsiB	MCAODC_25310	0.75	+0.6
1,786,591	+	gsiB	MCAODC_25310	0.76	-0.6
1,786,698	+	gsiB	MCAODC_25310	0.83	-0.2
1,786,699	-	gsiB	MCAODC_25310	0.83	-0.2
1,786,699	-	gsiB	MCAODC_25310	0.83	-1.1
1,786,699	-	gsiB	MCAODC_25310	0.83	-0.1
1,786,699	-	gsiB	MCAODC_25310	0.83	+1.8
1,786,702	+	gsiB	MCAODC_25310	0.83	+0.1
1,786,723	+	gsiB	MCAODC_25310	0.85	+0.1
1,786,812	-				-0.4
1,786,831	-				-1.9
1,786,859	+				-0.9
1,786,947	-				-2.1
1,786,981	+				-0.5
1,786,981	+				+1.5
1,786,982	-				+0.1
1,786,986	-				+1.6
1,786,986	-				+1.9
1,787,000	-				+1.6
1,787,000	-				+0.3
1,787,023	+				-1.6
1,787,023	+				-0.2
1,787,023	+				-0.1
1,787,023	+				-0.9
1,787,024	-				-0.2
1,787,024	-				-0.5
1,787,084	+				+1.3
1,787,084	+				-0.9
1,787,112	+				-1.7
1,787,164	-				-2.1
1,787,174	+	gsiA	MCAODC_25315	0.10	+0.9
1,787,175	-	gsiA	MCAODC_25315	0.10	-0.5
1,787,175	-	gsiA	MCAODC_25315	0.10	-0.5
1,787,175	-	gsiA	MCAODC_25315	0.10	+1.2
1,787,239	+	gsiA	MCAODC_25315	0.14	+0.6
1,787,239	+	gsiA	MCAODC_25315	0.14	+2.8
1,787,261	+	gsiA	MCAODC_25315	0.15	+1.1
1,787,262	-	gsiA	MCAODC_25315	0.15	-0.3
1,787,271	+	gsiA	MCAODC_25315	0.16	+1.0
1,787,283	-	gsiA	MCAODC_25315	0.16	+1.0
1,787,283	-	gsiA	MCAODC_25315	0.16	+1.3
1,787,294	+	gsiA	MCAODC_25315	0.17	+0.6
1,787,294	+	gsiA	MCAODC_25315	0.17	+1.9
1,787,295	-	gsiA	MCAODC_25315	0.17	-0.3
1,787,295	-	gsiA	MCAODC_25315	0.17	-0.0
1,787,302	+	gsiA	MCAODC_25315	0.17	-1.2
1,787,302	+	gsiA	MCAODC_25315	0.17	+2.7
1,787,302	+	gsiA	MCAODC_25315	0.17	-0.2
1,787,303	-	gsiA	MCAODC_25315	0.17	+1.4
1,787,303	-	gsiA	MCAODC_25315	0.17	+0.4
1,787,543	+	gsiA	MCAODC_25315	0.30	-0.9
1,787,544	-	gsiA	MCAODC_25315	0.30	+0.7
1,787,620	+	gsiA	MCAODC_25315	0.34	-0.9
1,787,901	-	gsiA	MCAODC_25315	0.49	-0.2
1,787,910	+	gsiA	MCAODC_25315	0.50	+0.2
1,787,911	-	gsiA	MCAODC_25315	0.50	+0.6
1,788,046	-	gsiA	MCAODC_25315	0.57	-1.1
1,788,061	+	gsiA	MCAODC_25315	0.58	+0.5
1,788,062	-	gsiA	MCAODC_25315	0.58	-0.7
1,788,062	-	gsiA	MCAODC_25315	0.58	+0.2
1,788,062	-	gsiA	MCAODC_25315	0.58	-2.6
1,788,062	-	gsiA	MCAODC_25315	0.58	-1.0
1,788,124	+	gsiA	MCAODC_25315	0.61	+1.9
1,788,124	+	gsiA	MCAODC_25315	0.61	-0.5
1,788,124	+	gsiA	MCAODC_25315	0.61	+1.2
1,788,125	-	gsiA	MCAODC_25315	0.61	+1.0
1,788,394	-	gsiA	MCAODC_25315	0.76	+1.8
1,788,492	+	gsiA	MCAODC_25315	0.81	+1.3
1,788,492	+	gsiA	MCAODC_25315	0.81	+0.5
1,788,493	-	gsiA	MCAODC_25315	0.81	+0.5
1,788,525	+	gsiA	MCAODC_25315	0.83	+0.8
1,788,526	-	gsiA	MCAODC_25315	0.83	+0.2
1,788,526	-	gsiA	MCAODC_25315	0.83	-0.5
1,788,582	-	gsiA	MCAODC_25315	0.86	-1.7
1,788,623	+	gsiA	MCAODC_25315	0.88	+0.1
1,788,636	+	gsiA	MCAODC_25315	0.88	+0.8
1,788,741	-				-0.7
1,788,741	-				+0.8
1,788,785	+				+0.1
1,788,797	+				-1.9
1,788,821	+				-1.4
1,788,872	+				-1.8
1,788,876	+				-1.8
1,788,933	+	iaaA	MCAODC_25320	0.16	-0.0
1,789,076	+	iaaA	MCAODC_25320	0.39	-2.1
1,789,076	+	iaaA	MCAODC_25320	0.39	-0.7
1,789,077	-	iaaA	MCAODC_25320	0.39	-1.2
1,789,141	-	iaaA	MCAODC_25320	0.50	+0.1
1,789,148	+	iaaA	MCAODC_25320	0.51	+0.5
1,789,149	-	iaaA	MCAODC_25320	0.51	+0.2
1,789,192	+	iaaA	MCAODC_25320	0.58	+1.8
1,789,197	+	iaaA	MCAODC_25320	0.59	+0.7
1,789,346	-	iaaA	MCAODC_25320	0.84	-0.9
1,789,356	-	iaaA	MCAODC_25320	0.85	+1.0
1,789,536	+	gsiA	MCAODC_25325	0.23	-0.0
1,789,537	-	gsiA	MCAODC_25325	0.23	+0.0
1,789,721	+	gsiA	MCAODC_25325	0.76	+3.8
1,789,727	-	gsiA	MCAODC_25325	0.78	-0.5
1,789,727	-	gsiA	MCAODC_25325	0.78	-1.8
1,789,727	-	gsiA	MCAODC_25325	0.78	+1.9
1,789,727	-	gsiA	MCAODC_25325	0.78	-0.2
1,789,803	+				-1.2
1,789,803	+				+1.0
1,789,803	+				-0.3
1,789,803	+				+1.3
1,789,804	-				-0.4
1,789,806	+				-1.2
1,789,806	+				-1.0
1,789,807	-				+0.2
1,789,840	+				-1.2
1,789,843	-				-0.3
1,789,846	+				+0.0