Strain Fitness in Escherichia coli ECRC101 around MCAODC_06290

Experiment: WM_EV240

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_EV240
1,259,327	+	lldD	MCAODC_06280	0.85	+1.8
1,259,328	-	lldD	MCAODC_06280	0.85	+0.3
1,259,350	+	lldD	MCAODC_06280	0.87	-1.1
1,259,350	+	lldD	MCAODC_06280	0.87	-0.4
1,259,351	-	lldD	MCAODC_06280	0.87	+1.0
1,259,413	-				-1.7
1,259,413	-				-1.2
1,259,428	+				-0.2
1,259,428	+				-0.0
1,259,428	+				+0.9
1,259,428	+				-0.3
1,259,429	-				-2.1
1,259,429	-				-2.0
1,259,430	+				+0.1
1,259,431	-				+1.4
1,259,431	-				-0.3
1,259,431	-				-0.4
1,259,431	-				-1.8
1,259,431	-				+0.6
1,259,431	-				-1.1
1,259,431	-				+0.3
1,259,494	+				-0.8
1,259,494	+				-0.1
1,259,494	+				+0.4
1,259,495	-				+0.7
1,259,495	-				+0.2
1,259,495	-				+0.2
1,259,526	+				-1.0
1,259,526	+				-1.3
1,259,526	+				-0.7
1,259,527	-				+0.8
1,259,527	-				-0.5
1,259,527	-				-0.6
1,259,527	-				-0.8
1,259,527	-				+1.0
1,259,527	-				+0.2
1,259,527	-				+1.3
1,259,548	-				+0.0
1,259,607	+	lldR	MCAODC_06285	0.14	+0.1
1,259,607	+	lldR	MCAODC_06285	0.14	-0.0
1,259,608	-	lldR	MCAODC_06285	0.14	-1.5
1,259,608	-	lldR	MCAODC_06285	0.14	-2.8
1,259,608	-	lldR	MCAODC_06285	0.14	-0.4
1,259,629	-	lldR	MCAODC_06285	0.17	+1.0
1,259,717	+	lldR	MCAODC_06285	0.28	-1.9
1,259,717	+	lldR	MCAODC_06285	0.28	+1.4
1,259,718	-	lldR	MCAODC_06285	0.28	-1.1
1,259,718	-	lldR	MCAODC_06285	0.28	+0.2
1,259,733	+	lldR	MCAODC_06285	0.30	+0.6
1,259,796	+	lldR	MCAODC_06285	0.38	-1.5
1,259,796	+	lldR	MCAODC_06285	0.38	+0.1
1,259,796	+	lldR	MCAODC_06285	0.38	-0.6
1,259,796	+	lldR	MCAODC_06285	0.38	-0.1
1,259,796	+	lldR	MCAODC_06285	0.38	-0.7
1,259,797	-	lldR	MCAODC_06285	0.39	-0.0
1,259,797	-	lldR	MCAODC_06285	0.39	+0.7
1,259,797	-	lldR	MCAODC_06285	0.39	-1.1
1,259,797	-	lldR	MCAODC_06285	0.39	-1.8
1,259,797	-	lldR	MCAODC_06285	0.39	-1.0
1,259,866	+	lldR	MCAODC_06285	0.47	-0.1
1,259,958	-	lldR	MCAODC_06285	0.59	+1.3
1,259,985	-	lldR	MCAODC_06285	0.63	-0.0
1,260,138	+	lldR	MCAODC_06285	0.82	+1.0
1,260,138	+	lldR	MCAODC_06285	0.82	-1.4
1,260,138	+	lldR	MCAODC_06285	0.82	-0.3
1,260,139	-	lldR	MCAODC_06285	0.83	-0.6
1,260,139	-	lldR	MCAODC_06285	0.83	-1.4
1,260,139	-	lldR	MCAODC_06285	0.83	+0.3
1,260,145	+	lldR	MCAODC_06285	0.83	+0.5
1,260,274	+				-0.5
1,260,298	+				-1.0
1,260,298	+				-0.5
1,260,299	-				-0.7
1,260,299	-				+0.1
1,260,299	-				-0.2
1,260,329	+				-1.1
1,260,330	-				-1.2
1,260,330	-				+0.8
1,260,419	+				-0.2
1,260,419	+				+0.9
1,260,419	+				-0.5
1,260,420	-				-0.5
1,260,420	-				+1.0
1,260,420	-				-2.4
1,260,461	+	lldP	MCAODC_06290	0.11	-0.1
1,260,539	+	lldP	MCAODC_06290	0.16	+1.0
1,260,539	+	lldP	MCAODC_06290	0.16	-0.7
1,260,539	+	lldP	MCAODC_06290	0.16	+0.2
1,260,539	+	lldP	MCAODC_06290	0.16	+0.0
1,260,540	-	lldP	MCAODC_06290	0.16	-0.2
1,260,540	-	lldP	MCAODC_06290	0.16	-1.1
1,260,540	-	lldP	MCAODC_06290	0.16	+0.0
1,260,548	+	lldP	MCAODC_06290	0.17	+0.2
1,260,658	+	lldP	MCAODC_06290	0.23	-1.6
1,260,668	+	lldP	MCAODC_06290	0.24	-1.2
1,260,700	+	lldP	MCAODC_06290	0.26	-1.2
1,260,700	+	lldP	MCAODC_06290	0.26	-0.1
1,260,700	+	lldP	MCAODC_06290	0.26	+0.8
1,260,701	-	lldP	MCAODC_06290	0.26	-2.3
1,260,701	-	lldP	MCAODC_06290	0.26	+0.5
1,260,747	-	lldP	MCAODC_06290	0.29	-1.6
1,260,850	+	lldP	MCAODC_06290	0.35	-0.6
1,260,857	+	lldP	MCAODC_06290	0.35	+0.4
1,260,934	+	lldP	MCAODC_06290	0.40	+0.9
1,260,934	+	lldP	MCAODC_06290	0.40	-0.3
1,260,935	-	lldP	MCAODC_06290	0.40	+0.7
1,260,935	-	lldP	MCAODC_06290	0.40	+0.6
1,260,965	+	lldP	MCAODC_06290	0.42	-0.9
1,260,978	-	lldP	MCAODC_06290	0.43	+0.8
1,260,990	+	lldP	MCAODC_06290	0.43	-0.0
1,260,990	+	lldP	MCAODC_06290	0.43	+0.7
1,260,990	+	lldP	MCAODC_06290	0.43	-0.3
1,260,991	-	lldP	MCAODC_06290	0.43	-0.9
1,260,991	-	lldP	MCAODC_06290	0.43	-0.7
1,260,995	+	lldP	MCAODC_06290	0.44	+0.8
1,260,996	-	lldP	MCAODC_06290	0.44	-1.5
1,261,070	+	lldP	MCAODC_06290	0.48	+0.6
1,261,071	-	lldP	MCAODC_06290	0.48	+0.1
1,261,071	-	lldP	MCAODC_06290	0.48	-1.8
1,261,071	-	lldP	MCAODC_06290	0.48	-0.3
1,261,172	+	lldP	MCAODC_06290	0.54	-0.7
1,261,172	+	lldP	MCAODC_06290	0.54	+1.5
1,261,173	-	lldP	MCAODC_06290	0.54	-1.1
1,261,173	-	lldP	MCAODC_06290	0.54	+0.5
1,261,173	-	lldP	MCAODC_06290	0.54	+0.8
1,261,173	-	lldP	MCAODC_06290	0.54	-0.6
1,261,173	-	lldP	MCAODC_06290	0.54	+1.3
1,261,208	+	lldP	MCAODC_06290	0.56	-0.7
1,261,208	+	lldP	MCAODC_06290	0.56	+0.4
1,261,208	+	lldP	MCAODC_06290	0.56	-0.0
1,261,209	-	lldP	MCAODC_06290	0.57	+0.7
1,261,209	-	lldP	MCAODC_06290	0.57	-0.0
1,261,209	-	lldP	MCAODC_06290	0.57	+0.1
1,261,209	-	lldP	MCAODC_06290	0.57	-0.2
1,261,209	-	lldP	MCAODC_06290	0.57	-2.5
1,261,213	+	lldP	MCAODC_06290	0.57	-0.7
1,261,213	+	lldP	MCAODC_06290	0.57	-1.0
1,261,326	-	lldP	MCAODC_06290	0.64	-1.2
1,261,332	+	lldP	MCAODC_06290	0.64	-0.7
1,261,380	+	lldP	MCAODC_06290	0.67	-1.6
1,261,380	+	lldP	MCAODC_06290	0.67	+0.3
1,261,380	+	lldP	MCAODC_06290	0.67	-1.2
1,261,380	+	lldP	MCAODC_06290	0.67	+0.1
1,261,380	+	lldP	MCAODC_06290	0.67	+0.4
1,261,381	-	lldP	MCAODC_06290	0.67	-1.1
1,261,381	-	lldP	MCAODC_06290	0.67	-0.3
1,261,381	-	lldP	MCAODC_06290	0.67	+1.2
1,261,465	+	lldP	MCAODC_06290	0.72	+0.8
1,261,466	-	lldP	MCAODC_06290	0.72	-0.8
1,261,466	-	lldP	MCAODC_06290	0.72	+0.8
1,261,475	+	lldP	MCAODC_06290	0.73	+0.9
1,261,475	+	lldP	MCAODC_06290	0.73	-1.4
1,261,476	-	lldP	MCAODC_06290	0.73	+0.5
1,261,610	+	lldP	MCAODC_06290	0.81	-1.9
1,261,611	-	lldP	MCAODC_06290	0.81	-0.2
1,261,611	-	lldP	MCAODC_06290	0.81	-0.7
1,261,655	+	lldP	MCAODC_06290	0.83	-0.6
1,261,656	-	lldP	MCAODC_06290	0.84	-0.7
1,261,657	+	lldP	MCAODC_06290	0.84	-0.0
1,261,658	-	lldP	MCAODC_06290	0.84	-0.8
1,261,658	-	lldP	MCAODC_06290	0.84	+0.6
1,261,676	+	lldP	MCAODC_06290	0.85	-2.5
1,261,677	-	lldP	MCAODC_06290	0.85	-0.7
1,261,677	-	lldP	MCAODC_06290	0.85	-1.6
1,261,705	+	lldP	MCAODC_06290	0.86	+1.3
1,261,705	+	lldP	MCAODC_06290	0.86	-1.2
1,261,706	-	lldP	MCAODC_06290	0.87	+0.1
1,261,706	-	lldP	MCAODC_06290	0.87	-3.2
1,261,717	+	lldP	MCAODC_06290	0.87	-0.3
1,261,717	+	lldP	MCAODC_06290	0.87	+0.8
1,261,755	-	lldP	MCAODC_06290	0.89	-1.5
1,261,756	+	lldP	MCAODC_06290	0.90	+1.0
1,261,810	+				-0.1
1,261,811	-				+0.8
1,261,829	+				-1.0
1,261,830	-				-0.4
1,261,869	+				-0.1
1,261,870	-				-1.9
1,261,889	+				-0.0
1,261,890	-				+3.3
1,262,064	+				+0.8
1,262,088	+				-0.7
1,262,088	+				-1.0
1,262,088	+				-1.5
1,262,088	+				-0.5
1,262,088	+				-0.9
1,262,089	-				+0.1
1,262,089	-				+0.7
1,262,089	-				-0.2
1,262,089	-				-1.6
1,262,089	-				+0.7
1,262,089	-				-0.3
1,262,089	-				+0.4
1,262,089	-				+0.1
1,262,089	-				+0.2
1,262,089	-				+0.6
1,262,201	+				+0.7
1,262,202	-				+1.5
1,262,224	+				+1.7
1,262,225	-				+0.2
1,262,242	+				+1.3
1,262,273	-				-1.7
1,262,273	-				+0.0
1,262,281	+				+0.5
1,262,282	-				-1.1
1,262,282	-				+0.8
1,262,282	-				-1.0
1,262,282	-				+0.1
1,262,282	-				-1.3
1,262,287	-				-1.4
1,262,287	-				-0.9
1,262,287	-				-1.0
1,262,298	-				+0.5
1,262,331	-				+0.6
1,262,331	-				-0.4
1,262,331	-				-0.4
1,262,343	+				+1.2
1,262,349	+				+1.1
1,262,349	+				+0.5
1,262,350	-				-1.8
1,262,350	-				+0.1
1,262,350	-				+0.1
1,262,352	+				+0.6
1,262,352	+				-1.4
1,262,352	+				+1.0
1,262,352	+				-1.8
1,262,352	+				-0.2
1,262,352	+				-0.8
1,262,352	+				+0.5
1,262,352	+				+1.4
1,262,352	+				+0.3
1,262,352	+				+1.5
1,262,353	-				-0.3
1,262,353	-				-0.9
1,262,359	+				+0.6
1,262,359	+				-0.9
1,262,360	-				-0.8
1,262,399	-				+0.9
1,262,404	+				+0.1
1,262,405	-				+0.8
1,262,405	-				-2.6
1,262,429	+				-0.7
1,262,429	+				+0.2
1,262,429	+				+0.7
1,262,429	+				+0.6
1,262,429	+				-0.0
1,262,429	+				-0.1
1,262,429	+				-1.4
1,262,429	+				-0.1
1,262,429	+				-3.2
1,262,430	-				+1.3
1,262,430	-				-1.8
1,262,430	-				+1.8
1,262,430	-				-1.3
1,262,430	-				+1.8
1,262,430	-				+1.8
1,262,446	-				+1.6
1,262,471	+				-0.5
1,262,471	+				+2.2
1,262,471	+				-0.1
1,262,472	-				-0.3
1,262,472	-				-0.5
1,262,538	+				+0.8
1,262,579	+				+0.9
1,262,579	+				-0.5
1,262,580	-				-0.3
1,262,580	-				-2.0
1,262,665	-				+1.0
1,262,700	+				-1.0
1,262,706	+				+1.2
1,262,706	+				+0.5
1,262,706	+				-0.1
1,262,707	-				+2.8
1,262,707	-				+0.6
1,262,707	-				-0.5
1,262,707	-				-0.5
1,262,707	-				-0.7
1,262,707	-				-0.5
1,262,707	-				-0.8
1,262,707	-				+1.4
1,262,707	-				+0.2
1,262,708	+				-1.0
1,262,709	-				-0.4
1,262,715	+				+0.2
1,262,715	+				+1.3
1,262,715	+				+2.0
1,262,743	+				-1.0
1,262,744	-				-1.3
1,262,744	-				-0.6
1,262,744	-				-0.1
1,262,812	+	ehaG	MCAODC_06295	0.11	-0.5
1,262,812	+	ehaG	MCAODC_06295	0.11	+0.2
1,262,812	+	ehaG	MCAODC_06295	0.11	-0.7
1,262,812	+	ehaG	MCAODC_06295	0.11	-0.6
1,262,812	+	ehaG	MCAODC_06295	0.11	+0.2
1,262,812	+	ehaG	MCAODC_06295	0.11	+0.6
1,262,813	-	ehaG	MCAODC_06295	0.11	+0.6
1,262,813	-	ehaG	MCAODC_06295	0.11	+0.4
1,262,813	-	ehaG	MCAODC_06295	0.11	-0.9
1,262,823	+	ehaG	MCAODC_06295	0.11	-0.4
1,262,835	+	ehaG	MCAODC_06295	0.11	-2.0
1,262,836	-	ehaG	MCAODC_06295	0.11	-0.4
1,262,838	+	ehaG	MCAODC_06295	0.11	-0.8
1,262,839	-	ehaG	MCAODC_06295	0.11	-0.5
1,262,848	+	ehaG	MCAODC_06295	0.12	-1.1
1,262,848	+	ehaG	MCAODC_06295	0.12	+0.8
1,262,849	-	ehaG	MCAODC_06295	0.12	-0.1
1,262,849	-	ehaG	MCAODC_06295	0.12	-0.8
1,262,849	-	ehaG	MCAODC_06295	0.12	+0.4
1,262,860	-	ehaG	MCAODC_06295	0.12	-1.1
1,262,887	-	ehaG	MCAODC_06295	0.12	-1.1