Strain Fitness in Escherichia coli ECRC101 around MCAODC_06185

Experiment: WM_EV240

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_EV240
1,237,981	+	waaO	MCAODC_06175	0.78	-0.3
1,238,087	-	waaO	MCAODC_06175	0.88	+1.0
1,238,211	-				-2.6
1,238,402	+	rfaY	MCAODC_06180	0.24	+0.2
1,238,673	-	rfaY	MCAODC_06180	0.63	-0.6
1,238,825	-	rfaY	MCAODC_06180	0.84	-0.2
1,238,859	+	rfaY	MCAODC_06180	0.89	+1.5
1,238,996	+				-3.3
1,239,045	+				-1.8
1,239,183	-	rfaJ	MCAODC_06185	0.22	-3.3
1,239,338	+	rfaJ	MCAODC_06185	0.37	-0.2
1,239,344	-	rfaJ	MCAODC_06185	0.38	+0.7
1,239,434	+	rfaJ	MCAODC_06185	0.47	-3.9
1,239,435	-	rfaJ	MCAODC_06185	0.47	-2.7
1,239,441	+	rfaJ	MCAODC_06185	0.47	-1.9
1,239,441	+	rfaJ	MCAODC_06185	0.47	-3.5
1,239,493	+	rfaJ	MCAODC_06185	0.52	-3.3
1,239,514	+	rfaJ	MCAODC_06185	0.54	+0.5
1,239,722	-	rfaJ	MCAODC_06185	0.75	-2.0
1,239,835	-	rfaJ	MCAODC_06185	0.86	-3.5
1,239,837	-	rfaJ	MCAODC_06185	0.86	-4.1
1,239,887	-				-3.4
1,240,304	+	rfaB	MCAODC_06190	0.28	+0.8
1,240,364	+	rfaB	MCAODC_06190	0.33	-0.7
1,240,426	+	rfaB	MCAODC_06190	0.39	-0.7
1,240,544	+	rfaB	MCAODC_06190	0.49	-2.5
1,240,683	-	rfaB	MCAODC_06190	0.61	+2.1
1,240,763	+	rfaB	MCAODC_06190	0.68	+0.8
1,240,764	-	rfaB	MCAODC_06190	0.68	+0.1
1,240,764	-	rfaB	MCAODC_06190	0.68	-0.7
1,240,764	-	rfaB	MCAODC_06190	0.68	+0.5
1,240,768	+	rfaB	MCAODC_06190	0.69	+1.1
1,240,800	+	rfaB	MCAODC_06190	0.71	+0.6
1,240,875	-	rfaB	MCAODC_06190	0.78	+0.3
1,240,886	+	rfaB	MCAODC_06190	0.79	+1.7
1,240,886	+	rfaB	MCAODC_06190	0.79	+0.4
1,240,967	+	rfaB	MCAODC_06190	0.86	+0.1