Experiment: WM_EV240
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yjjU and ytjA are separated by 121 nucleotides ytjA and osmY are separated by 126 nucleotides
MCAODC_01780: yjjU - Uncharacterized protein YjjU, at 344,111 to 345,184
yjjU
MCAODC_01785: ytjA - UPF0391 membrane protein YtjA, at 345,306 to 345,467
ytjA
MCAODC_01790: osmY - molecular chaperone OsmY, at 345,594 to 346,199
osmY
Position (kb) 345
346 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 344.310 kb on - strand, within yjjU at 344.323 kb on + strand, within yjjU at 344.324 kb on - strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.372 kb on + strand, within yjjU at 344.372 kb on + strand, within yjjU at 344.373 kb on - strand, within yjjU at 344.373 kb on - strand, within yjjU at 344.449 kb on - strand, within yjjU at 344.494 kb on + strand, within yjjU at 344.541 kb on + strand, within yjjU at 344.541 kb on + strand, within yjjU at 344.541 kb on + strand, within yjjU at 344.541 kb on + strand, within yjjU at 344.541 kb on + strand, within yjjU at 344.542 kb on - strand, within yjjU at 344.542 kb on - strand, within yjjU at 344.544 kb on + strand, within yjjU at 344.544 kb on + strand, within yjjU at 344.545 kb on - strand, within yjjU at 344.545 kb on - strand, within yjjU at 344.545 kb on - strand, within yjjU at 344.644 kb on - strand, within yjjU at 344.647 kb on + strand, within yjjU at 344.647 kb on + strand, within yjjU at 344.647 kb on + strand, within yjjU at 344.647 kb on + strand, within yjjU at 344.647 kb on + strand, within yjjU at 344.648 kb on - strand, within yjjU at 344.648 kb on - strand, within yjjU at 344.648 kb on - strand, within yjjU at 344.648 kb on - strand, within yjjU at 344.672 kb on - strand, within yjjU at 344.676 kb on + strand, within yjjU at 344.677 kb on - strand, within yjjU at 344.735 kb on + strand, within yjjU at 344.736 kb on - strand, within yjjU at 344.743 kb on - strand, within yjjU at 344.754 kb on + strand, within yjjU at 344.754 kb on + strand, within yjjU at 344.780 kb on - strand, within yjjU at 344.780 kb on - strand, within yjjU at 344.780 kb on - strand, within yjjU at 344.780 kb on - strand, within yjjU at 344.781 kb on + strand, within yjjU at 344.781 kb on + strand, within yjjU at 344.782 kb on - strand, within yjjU at 344.929 kb on + strand, within yjjU at 344.931 kb on + strand, within yjjU at 344.932 kb on - strand, within yjjU at 344.932 kb on - strand, within yjjU at 344.975 kb on - strand, within yjjU at 344.975 kb on - strand, within yjjU at 344.975 kb on - strand, within yjjU at 344.975 kb on - strand, within yjjU at 344.976 kb on + strand, within yjjU at 344.977 kb on - strand, within yjjU at 344.977 kb on - strand, within yjjU at 344.977 kb on - strand, within yjjU at 345.110 kb on + strand at 345.110 kb on + strand at 345.110 kb on + strand at 345.111 kb on - strand at 345.111 kb on - strand at 345.155 kb on - strand at 345.155 kb on - strand at 345.170 kb on + strand at 345.170 kb on + strand at 345.171 kb on - strand at 345.171 kb on - strand at 345.223 kb on + strand at 345.224 kb on - strand at 345.233 kb on + strand at 345.234 kb on - strand at 345.234 kb on - strand at 345.234 kb on - strand at 345.237 kb on - strand at 345.350 kb on + strand, within ytjA at 345.447 kb on + strand, within ytjA at 345.447 kb on + strand, within ytjA at 345.447 kb on + strand, within ytjA at 345.448 kb on - strand, within ytjA at 345.448 kb on - strand, within ytjA at 345.448 kb on - strand, within ytjA at 345.448 kb on - strand, within ytjA at 345.467 kb on + strand at 345.467 kb on + strand at 345.468 kb on - strand at 345.480 kb on + strand at 345.481 kb on - strand at 345.485 kb on + strand at 345.485 kb on + strand at 345.485 kb on + strand at 345.486 kb on - strand at 345.486 kb on - strand at 345.490 kb on - strand at 345.490 kb on - strand at 345.490 kb on - strand at 345.490 kb on - strand at 345.505 kb on + strand at 345.505 kb on + strand at 345.596 kb on - strand at 345.596 kb on - strand at 345.596 kb on - strand at 345.637 kb on - strand at 345.637 kb on - strand at 345.637 kb on - strand at 345.651 kb on - strand at 345.684 kb on + strand, within osmY at 345.684 kb on + strand, within osmY at 345.685 kb on - strand, within osmY at 345.968 kb on + strand, within osmY at 346.055 kb on + strand, within osmY at 346.055 kb on + strand, within osmY at 346.055 kb on + strand, within osmY at 346.056 kb on - strand, within osmY at 346.061 kb on + strand, within osmY at 346.155 kb on + strand at 346.156 kb on - strand at 346.193 kb on + strand at 346.193 kb on + strand at 346.193 kb on + strand at 346.193 kb on + strand at 346.193 kb on + strand at 346.213 kb on + strand at 346.213 kb on + strand at 346.213 kb on + strand at 346.214 kb on - strand at 346.214 kb on - strand at 346.214 kb on - strand at 346.283 kb on - strand at 346.283 kb on - strand at 346.283 kb on - strand at 346.326 kb on + strand at 346.326 kb on + strand at 346.336 kb on + strand at 346.337 kb on - strand at 346.354 kb on + strand at 346.357 kb on + strand at 346.357 kb on + strand at 346.387 kb on + strand at 346.387 kb on + strand at 346.388 kb on - strand at 346.388 kb on - strand at 346.392 kb on - strand at 346.392 kb on - strand at 346.397 kb on + strand at 346.397 kb on + strand at 346.398 kb on - strand at 346.402 kb on - strand at 346.402 kb on - strand at 346.454 kb on + strand at 346.454 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction WM_EV240 remove 344,310 - yjjU MCAODC_01780 0.19 -0.8 344,323 + yjjU MCAODC_01780 0.20 -0.0 344,324 - yjjU MCAODC_01780 0.20 +0.3 344,368 + yjjU MCAODC_01780 0.24 -1.5 344,368 + yjjU MCAODC_01780 0.24 -2.7 344,368 + yjjU MCAODC_01780 0.24 -0.9 344,368 + yjjU MCAODC_01780 0.24 +0.5 344,368 + yjjU MCAODC_01780 0.24 +0.8 344,368 + yjjU MCAODC_01780 0.24 +0.1 344,368 + yjjU MCAODC_01780 0.24 -0.7 344,368 + yjjU MCAODC_01780 0.24 +1.3 344,369 - yjjU MCAODC_01780 0.24 +0.2 344,369 - yjjU MCAODC_01780 0.24 +0.1 344,369 - yjjU MCAODC_01780 0.24 +1.3 344,369 - yjjU MCAODC_01780 0.24 +0.7 344,369 - yjjU MCAODC_01780 0.24 -0.8 344,369 - yjjU MCAODC_01780 0.24 -0.1 344,369 - yjjU MCAODC_01780 0.24 -1.1 344,369 - yjjU MCAODC_01780 0.24 +1.0 344,372 + yjjU MCAODC_01780 0.24 +0.8 344,372 + yjjU MCAODC_01780 0.24 +0.0 344,373 - yjjU MCAODC_01780 0.24 +0.9 344,373 - yjjU MCAODC_01780 0.24 -2.8 344,449 - yjjU MCAODC_01780 0.31 +1.7 344,494 + yjjU MCAODC_01780 0.36 -0.8 344,541 + yjjU MCAODC_01780 0.40 +2.0 344,541 + yjjU MCAODC_01780 0.40 -1.3 344,541 + yjjU MCAODC_01780 0.40 -0.4 344,541 + yjjU MCAODC_01780 0.40 +0.2 344,541 + yjjU MCAODC_01780 0.40 -1.7 344,542 - yjjU MCAODC_01780 0.40 -0.1 344,542 - yjjU MCAODC_01780 0.40 +1.2 344,544 + yjjU MCAODC_01780 0.40 +0.5 344,544 + yjjU MCAODC_01780 0.40 +0.4 344,545 - yjjU MCAODC_01780 0.40 -0.6 344,545 - yjjU MCAODC_01780 0.40 -0.2 344,545 - yjjU MCAODC_01780 0.40 -0.2 344,644 - yjjU MCAODC_01780 0.50 -1.9 344,647 + yjjU MCAODC_01780 0.50 +0.1 344,647 + yjjU MCAODC_01780 0.50 +0.6 344,647 + yjjU MCAODC_01780 0.50 +0.3 344,647 + yjjU MCAODC_01780 0.50 -0.7 344,647 + yjjU MCAODC_01780 0.50 -0.3 344,648 - yjjU MCAODC_01780 0.50 -0.3 344,648 - yjjU MCAODC_01780 0.50 +0.2 344,648 - yjjU MCAODC_01780 0.50 -0.7 344,648 - yjjU MCAODC_01780 0.50 -1.3 344,672 - yjjU MCAODC_01780 0.52 -1.8 344,676 + yjjU MCAODC_01780 0.53 -0.7 344,677 - yjjU MCAODC_01780 0.53 -0.4 344,735 + yjjU MCAODC_01780 0.58 -2.0 344,736 - yjjU MCAODC_01780 0.58 -1.0 344,743 - yjjU MCAODC_01780 0.59 -2.1 344,754 + yjjU MCAODC_01780 0.60 -1.5 344,754 + yjjU MCAODC_01780 0.60 -0.7 344,780 - yjjU MCAODC_01780 0.62 +0.0 344,780 - yjjU MCAODC_01780 0.62 +0.2 344,780 - yjjU MCAODC_01780 0.62 -0.8 344,780 - yjjU MCAODC_01780 0.62 +0.5 344,781 + yjjU MCAODC_01780 0.62 -0.2 344,781 + yjjU MCAODC_01780 0.62 -0.8 344,782 - yjjU MCAODC_01780 0.62 -0.7 344,929 + yjjU MCAODC_01780 0.76 -0.3 344,931 + yjjU MCAODC_01780 0.76 -0.5 344,932 - yjjU MCAODC_01780 0.76 +1.0 344,932 - yjjU MCAODC_01780 0.76 +0.4 344,975 - yjjU MCAODC_01780 0.80 +0.9 344,975 - yjjU MCAODC_01780 0.80 -0.3 344,975 - yjjU MCAODC_01780 0.80 -1.3 344,975 - yjjU MCAODC_01780 0.80 -1.6 344,976 + yjjU MCAODC_01780 0.81 -0.1 344,977 - yjjU MCAODC_01780 0.81 +0.8 344,977 - yjjU MCAODC_01780 0.81 +0.7 344,977 - yjjU MCAODC_01780 0.81 -0.3 345,110 + +0.0 345,110 + -2.8 345,110 + -2.4 345,111 - -1.1 345,111 - -0.5 345,155 - -0.6 345,155 - +1.4 345,170 + -0.5 345,170 + -0.6 345,171 - -1.3 345,171 - +0.3 345,223 + -0.9 345,224 - -0.4 345,233 + -0.9 345,234 - -0.2 345,234 - -1.1 345,234 - -0.4 345,237 - +1.0 345,350 + ytjA MCAODC_01785 0.27 -1.0 345,447 + ytjA MCAODC_01785 0.87 -0.7 345,447 + ytjA MCAODC_01785 0.87 -0.7 345,447 + ytjA MCAODC_01785 0.87 -0.0 345,448 - ytjA MCAODC_01785 0.88 +0.5 345,448 - ytjA MCAODC_01785 0.88 +1.7 345,448 - ytjA MCAODC_01785 0.88 -2.6 345,448 - ytjA MCAODC_01785 0.88 +0.5 345,467 + -0.2 345,467 + -0.3 345,468 - +1.0 345,480 + -0.0 345,481 - -0.3 345,485 + -0.8 345,485 + +1.6 345,485 + -0.4 345,486 - +1.4 345,486 - -0.5 345,490 - -1.3 345,490 - -0.8 345,490 - -1.3 345,490 - -1.0 345,505 + +0.6 345,505 + -0.6 345,596 - -0.0 345,596 - +0.5 345,596 - -0.9 345,637 - +0.7 345,637 - -0.2 345,637 - -1.3 345,651 - -0.8 345,684 + osmY MCAODC_01790 0.15 -1.1 345,684 + osmY MCAODC_01790 0.15 +1.1 345,685 - osmY MCAODC_01790 0.15 -0.5 345,968 + osmY MCAODC_01790 0.62 -0.9 346,055 + osmY MCAODC_01790 0.76 +0.8 346,055 + osmY MCAODC_01790 0.76 +0.1 346,055 + osmY MCAODC_01790 0.76 -0.9 346,056 - osmY MCAODC_01790 0.76 -0.5 346,061 + osmY MCAODC_01790 0.77 +0.2 346,155 + +0.7 346,156 - -1.7 346,193 + +0.5 346,193 + -1.3 346,193 + -0.8 346,193 + -1.1 346,193 + -0.8 346,213 + +0.8 346,213 + +0.8 346,213 + +0.5 346,214 - +2.1 346,214 - -0.6 346,214 - +0.3 346,283 - -0.1 346,283 - -0.2 346,283 - -2.0 346,326 + -0.3 346,326 + -0.2 346,336 + +0.8 346,337 - -0.5 346,354 + -0.3 346,357 + +0.6 346,357 + +0.5 346,387 + +0.4 346,387 + -0.4 346,388 - -0.8 346,388 - +0.7 346,392 - -0.3 346,392 - -1.6 346,397 + +0.2 346,397 + +0.1 346,398 - -0.8 346,402 - +0.8 346,402 - -2.6 346,454 + -0.1 346,454 + -0.3
Or see this region's nucleotide sequence