Experiment: WM_EV240
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yjjW and yjjV are separated by 213 nucleotides yjjV and yjjU overlap by 4 nucleotides
MCAODC_01760: yjjW - Putative glycyl-radical enzyme activating enzyme YjjW, at 342,255 to 343,118
yjjW
MCAODC_01775: yjjV - metal-dependent hydrolase, at 343,332 to 344,114
yjjV
MCAODC_01780: yjjU - Uncharacterized protein YjjU, at 344,111 to 345,184
yjjU
Position (kb) 343
344
345 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 342.494 kb on + strand, within yjjW at 342.495 kb on - strand, within yjjW at 342.495 kb on - strand, within yjjW at 342.644 kb on - strand, within yjjW at 342.656 kb on + strand, within yjjW at 342.663 kb on - strand, within yjjW at 342.710 kb on + strand, within yjjW at 342.710 kb on + strand, within yjjW at 342.716 kb on + strand, within yjjW at 342.716 kb on + strand, within yjjW at 342.717 kb on - strand, within yjjW at 342.717 kb on - strand, within yjjW at 342.825 kb on - strand, within yjjW at 342.836 kb on + strand, within yjjW at 342.836 kb on + strand, within yjjW at 342.837 kb on - strand, within yjjW at 342.870 kb on - strand, within yjjW at 343.005 kb on + strand, within yjjW at 343.097 kb on - strand at 343.110 kb on + strand at 343.111 kb on - strand at 343.128 kb on + strand at 343.135 kb on + strand at 343.135 kb on + strand at 343.265 kb on + strand at 343.265 kb on + strand at 343.266 kb on - strand at 343.266 kb on - strand at 343.319 kb on + strand at 343.333 kb on + strand at 343.346 kb on + strand at 343.357 kb on + strand at 343.357 kb on + strand at 343.357 kb on + strand at 343.358 kb on - strand at 343.358 kb on - strand at 343.358 kb on - strand at 343.358 kb on - strand at 343.358 kb on - strand at 343.365 kb on - strand at 343.365 kb on - strand at 343.365 kb on - strand at 343.367 kb on + strand at 343.367 kb on + strand at 343.367 kb on + strand at 343.368 kb on - strand at 343.565 kb on - strand, within yjjV at 343.571 kb on + strand, within yjjV at 343.571 kb on + strand, within yjjV at 343.571 kb on + strand, within yjjV at 343.571 kb on + strand, within yjjV at 343.571 kb on + strand, within yjjV at 343.572 kb on - strand, within yjjV at 343.572 kb on - strand, within yjjV at 343.572 kb on - strand, within yjjV at 343.572 kb on - strand, within yjjV at 343.572 kb on - strand, within yjjV at 343.572 kb on - strand, within yjjV at 343.575 kb on - strand, within yjjV at 343.605 kb on + strand, within yjjV at 343.679 kb on + strand, within yjjV at 343.679 kb on + strand, within yjjV at 343.680 kb on - strand, within yjjV at 343.738 kb on + strand, within yjjV at 343.896 kb on - strand, within yjjV at 343.910 kb on + strand, within yjjV at 343.911 kb on - strand, within yjjV at 343.911 kb on - strand, within yjjV at 343.937 kb on - strand, within yjjV at 344.016 kb on + strand, within yjjV at 344.100 kb on - strand at 344.131 kb on + strand at 344.131 kb on + strand at 344.132 kb on - strand at 344.132 kb on - strand at 344.132 kb on - strand at 344.132 kb on - strand at 344.183 kb on - strand at 344.271 kb on - strand, within yjjU at 344.273 kb on + strand, within yjjU at 344.273 kb on + strand, within yjjU at 344.273 kb on + strand, within yjjU at 344.273 kb on + strand, within yjjU at 344.273 kb on + strand, within yjjU at 344.274 kb on - strand, within yjjU at 344.274 kb on - strand, within yjjU at 344.274 kb on - strand, within yjjU at 344.274 kb on - strand, within yjjU at 344.299 kb on - strand, within yjjU at 344.310 kb on - strand, within yjjU at 344.323 kb on + strand, within yjjU at 344.324 kb on - strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.368 kb on + strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.369 kb on - strand, within yjjU at 344.372 kb on + strand, within yjjU at 344.372 kb on + strand, within yjjU at 344.373 kb on - strand, within yjjU at 344.373 kb on - strand, within yjjU at 344.449 kb on - strand, within yjjU at 344.494 kb on + strand, within yjjU at 344.541 kb on + strand, within yjjU at 344.541 kb on + strand, within yjjU at 344.541 kb on + strand, within yjjU at 344.541 kb on + strand, within yjjU at 344.541 kb on + strand, within yjjU at 344.542 kb on - strand, within yjjU at 344.542 kb on - strand, within yjjU at 344.544 kb on + strand, within yjjU at 344.544 kb on + strand, within yjjU at 344.545 kb on - strand, within yjjU at 344.545 kb on - strand, within yjjU at 344.545 kb on - strand, within yjjU at 344.644 kb on - strand, within yjjU at 344.647 kb on + strand, within yjjU at 344.647 kb on + strand, within yjjU at 344.647 kb on + strand, within yjjU at 344.647 kb on + strand, within yjjU at 344.647 kb on + strand, within yjjU at 344.648 kb on - strand, within yjjU at 344.648 kb on - strand, within yjjU at 344.648 kb on - strand, within yjjU at 344.648 kb on - strand, within yjjU at 344.672 kb on - strand, within yjjU at 344.676 kb on + strand, within yjjU at 344.677 kb on - strand, within yjjU at 344.735 kb on + strand, within yjjU at 344.736 kb on - strand, within yjjU at 344.743 kb on - strand, within yjjU at 344.754 kb on + strand, within yjjU at 344.754 kb on + strand, within yjjU at 344.780 kb on - strand, within yjjU at 344.780 kb on - strand, within yjjU at 344.780 kb on - strand, within yjjU at 344.780 kb on - strand, within yjjU at 344.781 kb on + strand, within yjjU at 344.781 kb on + strand, within yjjU at 344.782 kb on - strand, within yjjU at 344.929 kb on + strand, within yjjU at 344.931 kb on + strand, within yjjU at 344.932 kb on - strand, within yjjU at 344.932 kb on - strand, within yjjU at 344.975 kb on - strand, within yjjU at 344.975 kb on - strand, within yjjU at 344.975 kb on - strand, within yjjU at 344.975 kb on - strand, within yjjU at 344.976 kb on + strand, within yjjU at 344.977 kb on - strand, within yjjU at 344.977 kb on - strand, within yjjU at 344.977 kb on - strand, within yjjU at 345.110 kb on + strand at 345.110 kb on + strand at 345.110 kb on + strand at 345.111 kb on - strand at 345.111 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction WM_EV240 remove 342,494 + yjjW MCAODC_01760 0.28 -1.5 342,495 - yjjW MCAODC_01760 0.28 -1.0 342,495 - yjjW MCAODC_01760 0.28 -1.2 342,644 - yjjW MCAODC_01760 0.45 -0.2 342,656 + yjjW MCAODC_01760 0.46 -0.2 342,663 - yjjW MCAODC_01760 0.47 +0.6 342,710 + yjjW MCAODC_01760 0.53 +0.8 342,710 + yjjW MCAODC_01760 0.53 +0.7 342,716 + yjjW MCAODC_01760 0.53 -0.5 342,716 + yjjW MCAODC_01760 0.53 +1.5 342,717 - yjjW MCAODC_01760 0.53 +0.2 342,717 - yjjW MCAODC_01760 0.53 +0.9 342,825 - yjjW MCAODC_01760 0.66 -0.1 342,836 + yjjW MCAODC_01760 0.67 +1.7 342,836 + yjjW MCAODC_01760 0.67 +1.8 342,837 - yjjW MCAODC_01760 0.67 +0.8 342,870 - yjjW MCAODC_01760 0.71 +0.2 343,005 + yjjW MCAODC_01760 0.87 -0.1 343,097 - -0.2 343,110 + -0.6 343,111 - -0.8 343,128 + -1.0 343,135 + +0.2 343,135 + -1.8 343,265 + -1.2 343,265 + +1.2 343,266 - -2.0 343,266 - +0.8 343,319 + -0.8 343,333 + -0.2 343,346 + -0.1 343,357 + -1.3 343,357 + -2.1 343,357 + -0.2 343,358 - -0.3 343,358 - -0.9 343,358 - +0.6 343,358 - -0.6 343,358 - +0.6 343,365 - +0.5 343,365 - +0.0 343,365 - +0.3 343,367 + -1.3 343,367 + -2.1 343,367 + -0.2 343,368 - +0.4 343,565 - yjjV MCAODC_01775 0.30 -2.0 343,571 + yjjV MCAODC_01775 0.31 +0.4 343,571 + yjjV MCAODC_01775 0.31 +2.1 343,571 + yjjV MCAODC_01775 0.31 -1.0 343,571 + yjjV MCAODC_01775 0.31 +0.5 343,571 + yjjV MCAODC_01775 0.31 +0.1 343,572 - yjjV MCAODC_01775 0.31 -0.1 343,572 - yjjV MCAODC_01775 0.31 +0.2 343,572 - yjjV MCAODC_01775 0.31 +0.1 343,572 - yjjV MCAODC_01775 0.31 -0.9 343,572 - yjjV MCAODC_01775 0.31 +0.9 343,572 - yjjV MCAODC_01775 0.31 +0.7 343,575 - yjjV MCAODC_01775 0.31 -0.0 343,605 + yjjV MCAODC_01775 0.35 -0.8 343,679 + yjjV MCAODC_01775 0.44 +0.5 343,679 + yjjV MCAODC_01775 0.44 -1.6 343,680 - yjjV MCAODC_01775 0.44 +2.2 343,738 + yjjV MCAODC_01775 0.52 +0.7 343,896 - yjjV MCAODC_01775 0.72 +0.2 343,910 + yjjV MCAODC_01775 0.74 -0.0 343,911 - yjjV MCAODC_01775 0.74 +0.4 343,911 - yjjV MCAODC_01775 0.74 -0.3 343,937 - yjjV MCAODC_01775 0.77 +2.1 344,016 + yjjV MCAODC_01775 0.87 +0.5 344,100 - -0.1 344,131 + +0.0 344,131 + +0.4 344,132 - +1.2 344,132 - -0.3 344,132 - +0.5 344,132 - -0.8 344,183 - +0.0 344,271 - yjjU MCAODC_01780 0.15 -0.6 344,273 + yjjU MCAODC_01780 0.15 +1.9 344,273 + yjjU MCAODC_01780 0.15 -0.3 344,273 + yjjU MCAODC_01780 0.15 +0.0 344,273 + yjjU MCAODC_01780 0.15 -1.6 344,273 + yjjU MCAODC_01780 0.15 -0.1 344,274 - yjjU MCAODC_01780 0.15 -0.7 344,274 - yjjU MCAODC_01780 0.15 -0.3 344,274 - yjjU MCAODC_01780 0.15 -2.4 344,274 - yjjU MCAODC_01780 0.15 -0.1 344,299 - yjjU MCAODC_01780 0.18 -0.7 344,310 - yjjU MCAODC_01780 0.19 -0.8 344,323 + yjjU MCAODC_01780 0.20 -0.0 344,324 - yjjU MCAODC_01780 0.20 +0.3 344,368 + yjjU MCAODC_01780 0.24 -1.5 344,368 + yjjU MCAODC_01780 0.24 -2.7 344,368 + yjjU MCAODC_01780 0.24 -0.9 344,368 + yjjU MCAODC_01780 0.24 +0.5 344,368 + yjjU MCAODC_01780 0.24 +0.8 344,368 + yjjU MCAODC_01780 0.24 +0.1 344,368 + yjjU MCAODC_01780 0.24 -0.7 344,368 + yjjU MCAODC_01780 0.24 +1.3 344,369 - yjjU MCAODC_01780 0.24 +0.2 344,369 - yjjU MCAODC_01780 0.24 +0.1 344,369 - yjjU MCAODC_01780 0.24 +1.3 344,369 - yjjU MCAODC_01780 0.24 +0.7 344,369 - yjjU MCAODC_01780 0.24 -0.8 344,369 - yjjU MCAODC_01780 0.24 -0.1 344,369 - yjjU MCAODC_01780 0.24 -1.1 344,369 - yjjU MCAODC_01780 0.24 +1.0 344,372 + yjjU MCAODC_01780 0.24 +0.8 344,372 + yjjU MCAODC_01780 0.24 +0.0 344,373 - yjjU MCAODC_01780 0.24 +0.9 344,373 - yjjU MCAODC_01780 0.24 -2.8 344,449 - yjjU MCAODC_01780 0.31 +1.7 344,494 + yjjU MCAODC_01780 0.36 -0.8 344,541 + yjjU MCAODC_01780 0.40 +2.0 344,541 + yjjU MCAODC_01780 0.40 -1.3 344,541 + yjjU MCAODC_01780 0.40 -0.4 344,541 + yjjU MCAODC_01780 0.40 +0.2 344,541 + yjjU MCAODC_01780 0.40 -1.7 344,542 - yjjU MCAODC_01780 0.40 -0.1 344,542 - yjjU MCAODC_01780 0.40 +1.2 344,544 + yjjU MCAODC_01780 0.40 +0.5 344,544 + yjjU MCAODC_01780 0.40 +0.4 344,545 - yjjU MCAODC_01780 0.40 -0.6 344,545 - yjjU MCAODC_01780 0.40 -0.2 344,545 - yjjU MCAODC_01780 0.40 -0.2 344,644 - yjjU MCAODC_01780 0.50 -1.9 344,647 + yjjU MCAODC_01780 0.50 +0.1 344,647 + yjjU MCAODC_01780 0.50 +0.6 344,647 + yjjU MCAODC_01780 0.50 +0.3 344,647 + yjjU MCAODC_01780 0.50 -0.7 344,647 + yjjU MCAODC_01780 0.50 -0.3 344,648 - yjjU MCAODC_01780 0.50 -0.3 344,648 - yjjU MCAODC_01780 0.50 +0.2 344,648 - yjjU MCAODC_01780 0.50 -0.7 344,648 - yjjU MCAODC_01780 0.50 -1.3 344,672 - yjjU MCAODC_01780 0.52 -1.8 344,676 + yjjU MCAODC_01780 0.53 -0.7 344,677 - yjjU MCAODC_01780 0.53 -0.4 344,735 + yjjU MCAODC_01780 0.58 -2.0 344,736 - yjjU MCAODC_01780 0.58 -1.0 344,743 - yjjU MCAODC_01780 0.59 -2.1 344,754 + yjjU MCAODC_01780 0.60 -1.5 344,754 + yjjU MCAODC_01780 0.60 -0.7 344,780 - yjjU MCAODC_01780 0.62 +0.0 344,780 - yjjU MCAODC_01780 0.62 +0.2 344,780 - yjjU MCAODC_01780 0.62 -0.8 344,780 - yjjU MCAODC_01780 0.62 +0.5 344,781 + yjjU MCAODC_01780 0.62 -0.2 344,781 + yjjU MCAODC_01780 0.62 -0.8 344,782 - yjjU MCAODC_01780 0.62 -0.7 344,929 + yjjU MCAODC_01780 0.76 -0.3 344,931 + yjjU MCAODC_01780 0.76 -0.5 344,932 - yjjU MCAODC_01780 0.76 +1.0 344,932 - yjjU MCAODC_01780 0.76 +0.4 344,975 - yjjU MCAODC_01780 0.80 +0.9 344,975 - yjjU MCAODC_01780 0.80 -0.3 344,975 - yjjU MCAODC_01780 0.80 -1.3 344,975 - yjjU MCAODC_01780 0.80 -1.6 344,976 + yjjU MCAODC_01780 0.81 -0.1 344,977 - yjjU MCAODC_01780 0.81 +0.8 344,977 - yjjU MCAODC_01780 0.81 +0.7 344,977 - yjjU MCAODC_01780 0.81 -0.3 345,110 + +0.0 345,110 + -2.8 345,110 + -2.4 345,111 - -1.1 345,111 - -0.5
Or see this region's nucleotide sequence