Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS22145

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
3,588,893	+		ABI39_RS13810	0.16	-0.5
3,588,894	-		ABI39_RS13810	0.16	+1.0
3,588,956	+		ABI39_RS13810	0.23	+1.1
3,588,957	-		ABI39_RS13810	0.23	-0.4
3,588,957	-		ABI39_RS13810	0.23	-0.0
3,588,996	-		ABI39_RS13810	0.26	+0.1
3,589,050	-		ABI39_RS13810	0.32	+0.0
3,589,079	+		ABI39_RS13810	0.35	-0.4
3,589,119	-		ABI39_RS13810	0.39	-1.3
3,589,158	-		ABI39_RS13810	0.42	+0.2
3,589,320	-		ABI39_RS13810	0.58	-0.2
3,589,376	+		ABI39_RS13810	0.64	+1.4
3,589,570	+		ABI39_RS13810	0.83	+0.1
3,589,575	-		ABI39_RS13810	0.83	-0.2
3,589,599	-		ABI39_RS13810	0.86	+1.0
3,589,755	-				-2.5
3,589,771	+				+1.0
3,589,819	-				+1.2
3,589,825	-				-0.0
3,589,835	-				-0.5
3,589,859	-				+0.5
3,589,861	+				-0.9
3,589,862	-				+1.0
3,589,899	+				+0.7
3,589,899	+				+0.1
3,589,917	-		ABI39_RS22145	0.10	+1.0
3,589,978	-		ABI39_RS22145	0.27	+0.6
3,589,986	+		ABI39_RS22145	0.29	+0.8
3,590,092	-		ABI39_RS22145	0.59	-1.4
3,590,113	-		ABI39_RS22145	0.64	-0.6
3,590,212	+				+0.1
3,590,249	-				-0.4
3,590,259	-				+0.1
3,590,284	+				-1.0
3,590,303	-				+1.0
3,590,563	-		ABI39_RS13815	0.13	+1.0
3,590,589	+		ABI39_RS13815	0.14	-1.0
3,590,613	-		ABI39_RS13815	0.15	-1.0
3,590,673	-		ABI39_RS13815	0.18	+0.1
3,590,714	-		ABI39_RS13815	0.20	+1.0
3,590,844	-		ABI39_RS13815	0.26	-0.3
3,590,876	+		ABI39_RS13815	0.27	+0.1
3,590,931	-		ABI39_RS13815	0.30	-1.7
3,590,965	-		ABI39_RS13815	0.31	-0.0
3,591,174	+		ABI39_RS13815	0.41	+0.1
3,591,175	-		ABI39_RS13815	0.41	-0.7
3,591,180	-		ABI39_RS13815	0.41	+0.8