Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS18870 and ABI39_RS18875 are separated by 88 nucleotides ABI39_RS18875 and ABI39_RS18880 are separated by 12 nucleotides ABI39_RS18880 and ABI39_RS18885 are separated by 274 nucleotides
ABI39_RS18870: ABI39_RS18870 - putative sulfate exporter family transporter, at 4,755,942 to 4,756,928
_RS18870
ABI39_RS18875: ABI39_RS18875 - LysR family transcriptional regulator, at 4,757,017 to 4,757,913
_RS18875
ABI39_RS18880: ABI39_RS18880 - hypothetical protein, at 4,757,926 to 4,758,507
_RS18880
ABI39_RS18885: ABI39_RS18885 - ATP-dependent chaperone ClpB, at 4,758,782 to 4,761,370
_RS18885
Position (kb) 4757
4758 Strain fitness (log2 ratio) -2
-1
0
1 at 4756.035 kb on + strand at 4756.044 kb on - strand, within ABI39_RS18870 at 4756.141 kb on + strand, within ABI39_RS18870 at 4756.195 kb on - strand, within ABI39_RS18870 at 4756.278 kb on - strand, within ABI39_RS18870 at 4756.307 kb on - strand, within ABI39_RS18870 at 4756.401 kb on + strand, within ABI39_RS18870 at 4756.402 kb on - strand, within ABI39_RS18870 at 4756.445 kb on + strand, within ABI39_RS18870 at 4756.544 kb on + strand, within ABI39_RS18870 at 4756.599 kb on + strand, within ABI39_RS18870 at 4756.599 kb on + strand, within ABI39_RS18870 at 4756.599 kb on + strand, within ABI39_RS18870 at 4756.611 kb on - strand, within ABI39_RS18870 at 4756.774 kb on - strand, within ABI39_RS18870 at 4756.774 kb on - strand, within ABI39_RS18870 at 4756.840 kb on + strand at 4756.852 kb on - strand at 4756.929 kb on - strand at 4756.980 kb on + strand at 4756.989 kb on + strand at 4757.014 kb on - strand at 4757.128 kb on + strand, within ABI39_RS18875 at 4757.156 kb on + strand, within ABI39_RS18875 at 4757.224 kb on - strand, within ABI39_RS18875 at 4757.275 kb on + strand, within ABI39_RS18875 at 4757.397 kb on + strand, within ABI39_RS18875 at 4757.444 kb on + strand, within ABI39_RS18875 at 4757.603 kb on + strand, within ABI39_RS18875 at 4757.655 kb on + strand, within ABI39_RS18875 at 4757.660 kb on - strand, within ABI39_RS18875 at 4757.809 kb on - strand, within ABI39_RS18875 at 4758.058 kb on + strand, within ABI39_RS18880 at 4758.058 kb on + strand, within ABI39_RS18880 at 4758.058 kb on + strand, within ABI39_RS18880 at 4758.059 kb on - strand, within ABI39_RS18880 at 4758.063 kb on + strand, within ABI39_RS18880 at 4758.155 kb on - strand, within ABI39_RS18880 at 4758.451 kb on + strand at 4758.451 kb on + strand at 4758.456 kb on - strand at 4758.475 kb on + strand at 4758.494 kb on - strand at 4758.541 kb on - strand at 4758.746 kb on + strand at 4758.751 kb on - strand at 4758.777 kb on - strand at 4758.777 kb on - strand at 4758.895 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) remove 4,756,035 + +0.1 4,756,044 - ABI39_RS18870 0.10 +0.4 4,756,141 + ABI39_RS18870 0.20 -0.3 4,756,195 - ABI39_RS18870 0.26 +0.1 4,756,278 - ABI39_RS18870 0.34 -0.0 4,756,307 - ABI39_RS18870 0.37 -0.5 4,756,401 + ABI39_RS18870 0.47 -0.2 4,756,402 - ABI39_RS18870 0.47 +0.1 4,756,445 + ABI39_RS18870 0.51 +0.5 4,756,544 + ABI39_RS18870 0.61 +1.0 4,756,599 + ABI39_RS18870 0.67 -0.0 4,756,599 + ABI39_RS18870 0.67 -0.3 4,756,599 + ABI39_RS18870 0.67 -1.0 4,756,611 - ABI39_RS18870 0.68 -0.0 4,756,774 - ABI39_RS18870 0.84 +0.6 4,756,774 - ABI39_RS18870 0.84 -1.3 4,756,840 + -1.0 4,756,852 - +0.1 4,756,929 - +0.4 4,756,980 + +0.2 4,756,989 + -0.6 4,757,014 - +0.8 4,757,128 + ABI39_RS18875 0.12 -0.8 4,757,156 + ABI39_RS18875 0.15 +0.6 4,757,224 - ABI39_RS18875 0.23 -1.0 4,757,275 + ABI39_RS18875 0.29 -1.3 4,757,397 + ABI39_RS18875 0.42 -0.2 4,757,444 + ABI39_RS18875 0.48 -1.1 4,757,603 + ABI39_RS18875 0.65 +1.3 4,757,655 + ABI39_RS18875 0.71 -1.6 4,757,660 - ABI39_RS18875 0.72 -0.4 4,757,809 - ABI39_RS18875 0.88 -0.2 4,758,058 + ABI39_RS18880 0.23 -0.0 4,758,058 + ABI39_RS18880 0.23 -2.0 4,758,058 + ABI39_RS18880 0.23 -0.6 4,758,059 - ABI39_RS18880 0.23 +0.8 4,758,063 + ABI39_RS18880 0.24 +1.0 4,758,155 - ABI39_RS18880 0.39 -0.3 4,758,451 + -0.3 4,758,451 + +0.3 4,758,456 - +0.2 4,758,475 + +0.2 4,758,494 - -0.4 4,758,541 - -0.4 4,758,746 + +0.2 4,758,751 - -0.5 4,758,777 - +0.5 4,758,777 - +0.1 4,758,895 - -0.1
Or see this region's nucleotide sequence