Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS14565

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
3,770,826	+				-0.7
3,770,877	+				-1.1
3,770,928	-		ABI39_RS14560	0.18	-0.7
3,770,936	-		ABI39_RS14560	0.21	-1.1
3,770,941	+		ABI39_RS14560	0.22	-2.4
3,771,035	+		ABI39_RS14560	0.49	-1.9
3,771,041	-		ABI39_RS14560	0.50	-0.1
3,771,312	-				-0.5
3,771,345	-				-0.0
3,771,364	-				-0.1
3,771,472	+				-0.3
3,771,548	-		ABI39_RS14565	0.10	+0.1
3,771,574	+		ABI39_RS14565	0.12	+0.0
3,771,575	-		ABI39_RS14565	0.12	-1.2
3,771,575	-		ABI39_RS14565	0.12	-0.5
3,771,788	+		ABI39_RS14565	0.22	-0.7
3,771,896	+		ABI39_RS14565	0.28	-1.0
3,771,901	+		ABI39_RS14565	0.28	-0.4
3,771,901	+		ABI39_RS14565	0.28	-0.4
3,771,901	+		ABI39_RS14565	0.28	-0.6
3,772,094	+		ABI39_RS14565	0.38	+0.1
3,772,095	-		ABI39_RS14565	0.38	+0.2
3,772,098	+		ABI39_RS14565	0.38	-0.4
3,772,098	+		ABI39_RS14565	0.38	-0.7
3,772,098	+		ABI39_RS14565	0.38	+0.5
3,772,099	-		ABI39_RS14565	0.38	-0.4
3,772,099	-		ABI39_RS14565	0.38	-0.8
3,772,206	-		ABI39_RS14565	0.43	+0.9
3,772,307	-		ABI39_RS14565	0.48	+0.6
3,772,315	-		ABI39_RS14565	0.49	-0.7
3,772,488	-		ABI39_RS14565	0.57	-0.3
3,772,628	-		ABI39_RS14565	0.64	+0.6
3,772,678	+		ABI39_RS14565	0.67	-1.1
3,772,678	+		ABI39_RS14565	0.67	+0.3
3,772,679	-		ABI39_RS14565	0.67	-1.5
3,772,717	+		ABI39_RS14565	0.69	+0.3
3,772,719	+		ABI39_RS14565	0.69	-1.4
3,772,719	+		ABI39_RS14565	0.69	+0.3
3,772,830	+		ABI39_RS14565	0.74	-0.0
3,772,836	-		ABI39_RS14565	0.75	-1.4
3,772,935	-		ABI39_RS14565	0.80	+0.4
3,772,957	+		ABI39_RS14565	0.81	-0.7
3,772,988	+		ABI39_RS14565	0.82	-0.2
3,773,049	-		ABI39_RS14565	0.85	-0.3
3,773,063	-		ABI39_RS14565	0.86	+1.5
3,773,146	+				+0.2
3,773,147	-				+0.1
3,773,147	-				-0.6
3,773,220	+				+0.5
3,773,220	+				+0.3
3,773,236	+				+0.3
3,773,257	+				-0.2
3,773,355	-				+0.7
3,773,358	+				+0.0
3,773,383	+				-0.3
3,773,383	+				-0.5
3,773,417	-				-2.1
3,773,508	+				+0.0
3,773,508	+				-0.2
3,773,509	-				-0.8
3,773,597	-		ABI39_RS14570	0.15	+0.7
3,773,597	-		ABI39_RS14570	0.15	-0.3
3,774,124	-		ABI39_RS14570	0.46	-0.1
3,774,291	+		ABI39_RS14570	0.56	-0.8
3,774,295	+		ABI39_RS14570	0.57	+0.9
3,774,334	-		ABI39_RS14570	0.59	-1.3