Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11990

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
3,171,526	-				+0.3
3,171,528	-				-0.7
3,171,528	-				+1.4
3,171,621	-				-2.3
3,171,679	+		ABI39_RS11985	0.11	+0.9
3,171,733	-		ABI39_RS11985	0.17	-1.1
3,171,865	-		ABI39_RS11985	0.32	-0.1
3,171,865	-		ABI39_RS11985	0.32	+0.4
3,171,868	+		ABI39_RS11985	0.33	-0.3
3,171,902	+		ABI39_RS11985	0.37	+2.7
3,171,940	-		ABI39_RS11985	0.41	+0.4
3,172,030	-		ABI39_RS11985	0.51	-0.5
3,172,096	+		ABI39_RS11985	0.59	+1.4
3,172,099	-		ABI39_RS11985	0.59	+2.5
3,172,147	+		ABI39_RS11985	0.65	-0.8
3,172,147	+		ABI39_RS11985	0.65	+1.2
3,172,148	-		ABI39_RS11985	0.65	-1.4
3,172,158	-		ABI39_RS11985	0.66	+1.1
3,172,215	+		ABI39_RS11985	0.73	-0.2
3,172,279	+		ABI39_RS11985	0.80	+0.3
3,172,339	+		ABI39_RS11985	0.87	-0.1
3,172,379	-				-0.5
3,172,396	+				+1.1
3,172,439	+				+1.2
3,172,458	+				+0.2
3,172,470	+				-0.1
3,172,486	+				+0.9
3,172,516	-				-0.4
3,172,516	-				+0.4
3,172,606	+				+2.0
3,172,612	-				-0.2
3,172,686	-		ABI39_RS11990	0.15	+0.0
3,172,692	+		ABI39_RS11990	0.15	+1.8
3,172,806	+		ABI39_RS11990	0.22	+2.0
3,172,944	+		ABI39_RS11990	0.31	+0.6
3,172,944	+		ABI39_RS11990	0.31	-0.1
3,172,952	+		ABI39_RS11990	0.32	+0.2
3,172,954	+		ABI39_RS11990	0.32	+2.5
3,172,957	+		ABI39_RS11990	0.32	+1.3
3,172,958	-		ABI39_RS11990	0.32	-0.3
3,172,961	-		ABI39_RS11990	0.33	+0.3
3,172,986	+		ABI39_RS11990	0.34	+0.5
3,173,004	-		ABI39_RS11990	0.35	+0.3
3,173,027	-		ABI39_RS11990	0.37	-0.9
3,173,033	+		ABI39_RS11990	0.37	+1.5
3,173,044	-		ABI39_RS11990	0.38	-0.4
3,173,077	-		ABI39_RS11990	0.40	-0.3
3,173,086	-		ABI39_RS11990	0.41	-0.5
3,173,120	+		ABI39_RS11990	0.43	+0.9
3,173,122	+		ABI39_RS11990	0.43	+3.2
3,173,122	+		ABI39_RS11990	0.43	+0.2
3,173,130	+		ABI39_RS11990	0.44	+1.3
3,173,131	-		ABI39_RS11990	0.44	+0.0
3,173,134	+		ABI39_RS11990	0.44	+2.4
3,173,217	+		ABI39_RS11990	0.49	+0.9
3,173,406	-		ABI39_RS11990	0.61	+0.6
3,173,473	-		ABI39_RS11990	0.66	+1.2
3,173,495	+		ABI39_RS11990	0.67	+2.3
3,173,524	-		ABI39_RS11990	0.69	+0.5
3,173,524	-		ABI39_RS11990	0.69	+1.1
3,173,615	-		ABI39_RS11990	0.75	+0.0
3,173,698	-		ABI39_RS11990	0.80	-0.2
3,173,698	-		ABI39_RS11990	0.80	-0.0
3,173,701	+		ABI39_RS11990	0.81	+0.6
3,173,705	+		ABI39_RS11990	0.81	+2.9
3,173,710	-		ABI39_RS11990	0.81	+0.5
3,173,809	+		ABI39_RS11990	0.88	+2.5
3,173,839	-		ABI39_RS11990	0.90	-1.2
3,173,899	-				-0.3
3,173,917	-				+0.1
3,173,917	-				-0.4
3,174,045	+				+0.6
3,174,149	+				-0.2
3,174,180	-		ABI39_RS11995	0.10	-0.6
3,174,180	-		ABI39_RS11995	0.10	+0.8
3,174,181	+		ABI39_RS11995	0.10	-2.7
3,174,182	-		ABI39_RS11995	0.10	-1.0
3,174,298	+		ABI39_RS11995	0.17	-0.1
3,174,402	+		ABI39_RS11995	0.23	+0.9
3,174,445	+		ABI39_RS11995	0.26	-0.5
3,174,446	-		ABI39_RS11995	0.26	-0.5
3,174,446	-		ABI39_RS11995	0.26	-0.7
3,174,471	+		ABI39_RS11995	0.27	+0.0
3,174,472	-		ABI39_RS11995	0.27	+0.0
3,174,477	+		ABI39_RS11995	0.27	+0.2
3,174,506	-		ABI39_RS11995	0.29	-0.2
3,174,524	+		ABI39_RS11995	0.30	+0.2
3,174,590	-		ABI39_RS11995	0.34	+0.3
3,174,693	+		ABI39_RS11995	0.40	+1.5
3,174,693	+		ABI39_RS11995	0.40	-0.1
3,174,695	+		ABI39_RS11995	0.40	-0.8
3,174,713	-		ABI39_RS11995	0.41	-0.1
3,174,823	+		ABI39_RS11995	0.47	+0.7
3,174,903	-		ABI39_RS11995	0.52	+0.2
3,174,903	-		ABI39_RS11995	0.52	-0.0
3,174,991	+		ABI39_RS11995	0.57	+0.6
3,174,991	+		ABI39_RS11995	0.57	+0.5