Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS07460

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
2,032,422	-		ABI39_RS07455	0.38	-0.7
2,032,424	-		ABI39_RS07455	0.38	-0.6
2,032,460	-		ABI39_RS07455	0.41	-0.1
2,032,685	+		ABI39_RS07455	0.57	+0.4
2,032,694	-		ABI39_RS07455	0.58	-0.7
2,032,713	-		ABI39_RS07455	0.60	-0.1
2,032,713	-		ABI39_RS07455	0.60	+0.2
2,032,842	-		ABI39_RS07455	0.69	-1.1
2,032,930	+		ABI39_RS07455	0.75	-0.5
2,032,934	+		ABI39_RS07455	0.76	-0.2
2,032,934	+		ABI39_RS07455	0.76	-0.4
2,032,987	-		ABI39_RS07455	0.80	+1.0
2,033,079	-		ABI39_RS07455	0.86	-0.0
2,033,182	+				-1.1
2,033,305	-				-0.0
2,033,327	+				+1.0
2,033,348	+				-0.5
2,033,502	+		ABI39_RS07460	0.27	-0.2
2,033,521	-		ABI39_RS07460	0.30	-0.0
2,033,525	+		ABI39_RS07460	0.30	+0.4
2,033,725	+		ABI39_RS07460	0.60	+0.9
2,033,726	-		ABI39_RS07460	0.60	+0.9
2,033,782	+		ABI39_RS07460	0.69	+0.0
2,033,784	+		ABI39_RS07460	0.69	+0.4
2,033,800	+		ABI39_RS07460	0.71	+0.2
2,033,800	+		ABI39_RS07460	0.71	-0.5
2,034,016	+				+1.6
2,034,029	-				+0.2
2,034,051	+				-0.2
2,034,214	-				+0.3
2,034,232	+				-0.0
2,034,273	+		ABI39_RS07465	0.14	-0.6
2,034,315	+		ABI39_RS07465	0.26	-0.1
2,034,328	+		ABI39_RS07465	0.30	-2.2
2,034,395	+		ABI39_RS07465	0.50	-0.0
2,034,663	-				-0.3
2,034,675	+				-0.3
2,034,691	+				-0.3
2,034,697	-				-0.1
2,034,846	-		ABI39_RS07470	0.20	-0.1
2,034,850	-		ABI39_RS07470	0.20	+0.6