Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS01910 and ABI39_RS01915 are separated by 49 nucleotides
ABI39_RS01910: ABI39_RS01910 - [FeFe] hydrogenase H-cluster radical SAM maturase HydG, at 561,190 to 562,608
_RS01910
ABI39_RS01915: ABI39_RS01915 - [FeFe] hydrogenase H-cluster maturation GTPase HydF, at 562,658 to 563,848
_RS01915
Position (kb) 562
563
564 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 561.673 kb on - strand, within ABI39_RS01910 at 561.742 kb on + strand, within ABI39_RS01910 at 561.796 kb on + strand, within ABI39_RS01910 at 561.847 kb on + strand, within ABI39_RS01910 at 561.950 kb on + strand, within ABI39_RS01910 at 561.995 kb on + strand, within ABI39_RS01910 at 562.082 kb on + strand, within ABI39_RS01910 at 562.126 kb on - strand, within ABI39_RS01910 at 562.126 kb on - strand, within ABI39_RS01910 at 562.387 kb on - strand, within ABI39_RS01910 at 562.416 kb on + strand, within ABI39_RS01910 at 562.482 kb on + strand at 562.607 kb on - strand at 563.056 kb on - strand, within ABI39_RS01915 at 563.142 kb on + strand, within ABI39_RS01915 at 563.224 kb on - strand, within ABI39_RS01915 at 563.248 kb on + strand, within ABI39_RS01915 at 563.250 kb on + strand, within ABI39_RS01915 at 563.480 kb on + strand, within ABI39_RS01915 at 563.491 kb on + strand, within ABI39_RS01915 at 563.491 kb on + strand, within ABI39_RS01915 at 563.494 kb on - strand, within ABI39_RS01915 at 563.505 kb on + strand, within ABI39_RS01915 at 563.652 kb on + strand, within ABI39_RS01915 at 563.703 kb on + strand, within ABI39_RS01915 at 563.741 kb on + strand at 563.742 kb on - strand at 563.914 kb on - strand at 563.946 kb on + strand at 563.947 kb on - strand at 564.136 kb on + strand at 564.137 kb on - strand at 564.214 kb on + strand at 564.245 kb on + strand at 564.245 kb on + strand at 564.388 kb on - strand at 564.475 kb on + strand at 564.584 kb on + strand at 564.692 kb on - strand at 564.781 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) remove 561,673 - ABI39_RS01910 0.34 -0.5 561,742 + ABI39_RS01910 0.39 -1.5 561,796 + ABI39_RS01910 0.43 -0.4 561,847 + ABI39_RS01910 0.46 +0.4 561,950 + ABI39_RS01910 0.54 -0.5 561,995 + ABI39_RS01910 0.57 -0.4 562,082 + ABI39_RS01910 0.63 -0.5 562,126 - ABI39_RS01910 0.66 -1.2 562,126 - ABI39_RS01910 0.66 -0.5 562,387 - ABI39_RS01910 0.84 -0.0 562,416 + ABI39_RS01910 0.86 +0.1 562,482 + +0.6 562,607 - +1.4 563,056 - ABI39_RS01915 0.33 -0.6 563,142 + ABI39_RS01915 0.41 -0.9 563,224 - ABI39_RS01915 0.48 -0.4 563,248 + ABI39_RS01915 0.50 +0.6 563,250 + ABI39_RS01915 0.50 -0.4 563,480 + ABI39_RS01915 0.69 -1.3 563,491 + ABI39_RS01915 0.70 -0.8 563,491 + ABI39_RS01915 0.70 -0.7 563,494 - ABI39_RS01915 0.70 -1.5 563,505 + ABI39_RS01915 0.71 +0.2 563,652 + ABI39_RS01915 0.83 -0.4 563,703 + ABI39_RS01915 0.88 -0.7 563,741 + +0.2 563,742 - -0.8 563,914 - +0.5 563,946 + +0.6 563,947 - -0.8 564,136 + +0.2 564,137 - +0.9 564,214 + -0.2 564,245 + +0.3 564,245 + +0.2 564,388 - +0.2 564,475 + -0.3 564,584 + -0.2 564,692 - -2.8 564,781 - +0.2
Or see this region's nucleotide sequence