Strain Fitness in Escherichia coli ECRC101 around MCAODC_19890

Experiment: WM_EV240

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMCAODC_19880 and lomR are separated by 64 nucleotideslomR and MCAODC_19890 are separated by 67 nucleotidesMCAODC_19890 and MCAODC_19895 are separated by 240 nucleotidesMCAODC_19895 and MCAODC_19900 overlap by 4 nucleotides MCAODC_19880: MCAODC_19880 - phage tail protein, at 800,171 to 801,484 _19880 MCAODC_19885: lomR - Ail/Lom family protein, at 801,549 to 802,148 lomR MCAODC_19890: MCAODC_19890 - Phage-related protein, tail protein J, at 802,216 to 805,695 _19890 MCAODC_19895: MCAODC_19895 - tail assembly protein, at 805,936 to 806,514 _19895 MCAODC_19900: MCAODC_19900 - phage tail protein, at 806,511 to 807,254 _19900 Position (kb) 802 803 804 805 806Strain fitness (log2 ratio) -1 0 1at 803.607 kb on - strand, within MCAODC_19890

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_EV240
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803,607 - MCAODC_19890 0.40 -0.8

Or see this region's nucleotide sequence