Experiment: WM_EV240
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt wecA and MCAODC_05090 are separated by 11 nucleotides MCAODC_05090 and rho are separated by 9 nucleotides
MCAODC_05085: wecA - UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase, at 1,023,756 to 1,024,859
wecA
MCAODC_05090: MCAODC_05090 - hypothetical protein, at 1,024,871 to 1,025,089
_05090
MCAODC_05095: rho - transcription termination factor Rho, at 1,025,099 to 1,026,358
rho
Position (kb) 1024
1025
1026 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 1023.966 kb on - strand, within wecA at 1023.966 kb on - strand, within wecA at 1023.993 kb on - strand, within wecA at 1024.022 kb on + strand, within wecA at 1024.023 kb on - strand, within wecA at 1024.023 kb on - strand, within wecA at 1024.023 kb on - strand, within wecA at 1024.023 kb on - strand, within wecA at 1024.023 kb on - strand, within wecA at 1024.023 kb on - strand, within wecA at 1024.058 kb on + strand, within wecA at 1024.073 kb on - strand, within wecA at 1024.076 kb on + strand, within wecA at 1024.076 kb on + strand, within wecA at 1024.077 kb on - strand, within wecA at 1024.077 kb on - strand, within wecA at 1024.077 kb on - strand, within wecA at 1024.088 kb on + strand, within wecA at 1024.217 kb on + strand, within wecA at 1024.228 kb on + strand, within wecA at 1024.228 kb on + strand, within wecA at 1024.229 kb on - strand, within wecA at 1024.245 kb on - strand, within wecA at 1024.253 kb on + strand, within wecA at 1024.254 kb on - strand, within wecA at 1024.254 kb on - strand, within wecA at 1024.254 kb on - strand, within wecA at 1024.262 kb on + strand, within wecA at 1024.262 kb on + strand, within wecA at 1024.262 kb on + strand, within wecA at 1024.262 kb on + strand, within wecA at 1024.262 kb on + strand, within wecA at 1024.262 kb on + strand, within wecA at 1024.262 kb on + strand, within wecA at 1024.262 kb on + strand, within wecA at 1024.262 kb on + strand, within wecA at 1024.263 kb on - strand, within wecA at 1024.263 kb on - strand, within wecA at 1024.263 kb on - strand, within wecA at 1024.263 kb on - strand, within wecA at 1024.263 kb on - strand, within wecA at 1024.263 kb on - strand, within wecA at 1024.263 kb on - strand, within wecA at 1024.263 kb on - strand, within wecA at 1024.263 kb on - strand, within wecA at 1024.263 kb on - strand, within wecA at 1024.263 kb on - strand, within wecA at 1024.263 kb on - strand, within wecA at 1024.264 kb on + strand, within wecA at 1024.264 kb on + strand, within wecA at 1024.264 kb on + strand, within wecA at 1024.264 kb on + strand, within wecA at 1024.264 kb on + strand, within wecA at 1024.265 kb on - strand, within wecA at 1024.265 kb on - strand, within wecA at 1024.265 kb on - strand, within wecA at 1024.265 kb on - strand, within wecA at 1024.412 kb on + strand, within wecA at 1024.435 kb on - strand, within wecA at 1024.487 kb on + strand, within wecA at 1024.487 kb on + strand, within wecA at 1024.487 kb on + strand, within wecA at 1024.488 kb on - strand, within wecA at 1024.488 kb on - strand, within wecA at 1024.488 kb on - strand, within wecA at 1024.488 kb on - strand, within wecA at 1024.488 kb on - strand, within wecA at 1024.490 kb on - strand, within wecA at 1024.490 kb on - strand, within wecA at 1024.490 kb on - strand, within wecA at 1024.490 kb on - strand, within wecA at 1024.490 kb on - strand, within wecA at 1024.490 kb on - strand, within wecA at 1024.500 kb on - strand, within wecA at 1024.507 kb on + strand, within wecA at 1024.507 kb on + strand, within wecA at 1024.507 kb on + strand, within wecA at 1024.529 kb on + strand, within wecA at 1024.529 kb on + strand, within wecA at 1024.529 kb on + strand, within wecA at 1024.529 kb on + strand, within wecA at 1024.529 kb on + strand, within wecA at 1024.530 kb on - strand, within wecA at 1024.530 kb on - strand, within wecA at 1024.530 kb on - strand, within wecA at 1024.551 kb on + strand, within wecA at 1024.552 kb on - strand, within wecA at 1024.634 kb on - strand, within wecA at 1024.652 kb on + strand, within wecA at 1024.652 kb on + strand, within wecA at 1024.652 kb on + strand, within wecA at 1024.653 kb on - strand, within wecA at 1024.654 kb on + strand, within wecA at 1024.654 kb on + strand, within wecA at 1024.655 kb on - strand, within wecA at 1024.655 kb on - strand, within wecA at 1024.655 kb on - strand, within wecA at 1024.655 kb on - strand, within wecA at 1024.655 kb on - strand, within wecA at 1024.655 kb on - strand, within wecA at 1024.655 kb on - strand, within wecA at 1024.655 kb on - strand, within wecA at 1024.657 kb on + strand, within wecA at 1024.657 kb on + strand, within wecA at 1024.720 kb on - strand, within wecA at 1024.720 kb on - strand, within wecA at 1024.762 kb on - strand at 1024.824 kb on - strand at 1024.839 kb on - strand at 1024.851 kb on + strand at 1024.885 kb on + strand at 1024.894 kb on + strand, within MCAODC_05090 at 1024.894 kb on + strand, within MCAODC_05090 at 1024.895 kb on - strand, within MCAODC_05090 at 1024.895 kb on - strand, within MCAODC_05090 at 1024.896 kb on + strand, within MCAODC_05090 at 1024.896 kb on + strand, within MCAODC_05090 at 1024.912 kb on + strand, within MCAODC_05090 at 1024.985 kb on + strand, within MCAODC_05090 at 1025.015 kb on + strand, within MCAODC_05090 at 1025.036 kb on - strand, within MCAODC_05090 at 1025.042 kb on - strand, within MCAODC_05090 at 1025.042 kb on - strand, within MCAODC_05090 at 1025.047 kb on + strand, within MCAODC_05090 at 1025.047 kb on + strand, within MCAODC_05090 at 1025.047 kb on + strand, within MCAODC_05090 at 1025.047 kb on + strand, within MCAODC_05090 at 1025.048 kb on - strand, within MCAODC_05090 at 1025.048 kb on - strand, within MCAODC_05090 at 1025.049 kb on + strand, within MCAODC_05090 at 1025.049 kb on + strand, within MCAODC_05090 at 1025.050 kb on - strand, within MCAODC_05090 at 1025.050 kb on - strand, within MCAODC_05090 at 1025.050 kb on - strand, within MCAODC_05090 at 1025.050 kb on - strand, within MCAODC_05090 at 1025.050 kb on - strand, within MCAODC_05090 at 1025.067 kb on + strand, within MCAODC_05090 at 1025.068 kb on - strand at 1025.068 kb on - strand at 1025.089 kb on + strand at 1025.089 kb on + strand at 1025.101 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction WM_EV240 remove 1,023,966 - wecA MCAODC_05085 0.19 -2.7 1,023,966 - wecA MCAODC_05085 0.19 -3.3 1,023,993 - wecA MCAODC_05085 0.21 -1.0 1,024,022 + wecA MCAODC_05085 0.24 -2.3 1,024,023 - wecA MCAODC_05085 0.24 -2.2 1,024,023 - wecA MCAODC_05085 0.24 -2.1 1,024,023 - wecA MCAODC_05085 0.24 -4.2 1,024,023 - wecA MCAODC_05085 0.24 -3.5 1,024,023 - wecA MCAODC_05085 0.24 -3.1 1,024,023 - wecA MCAODC_05085 0.24 -3.5 1,024,058 + wecA MCAODC_05085 0.27 -2.0 1,024,073 - wecA MCAODC_05085 0.29 -1.3 1,024,076 + wecA MCAODC_05085 0.29 -1.9 1,024,076 + wecA MCAODC_05085 0.29 -2.0 1,024,077 - wecA MCAODC_05085 0.29 -3.5 1,024,077 - wecA MCAODC_05085 0.29 -0.3 1,024,077 - wecA MCAODC_05085 0.29 -0.4 1,024,088 + wecA MCAODC_05085 0.30 -3.7 1,024,217 + wecA MCAODC_05085 0.42 -4.7 1,024,228 + wecA MCAODC_05085 0.43 -3.8 1,024,228 + wecA MCAODC_05085 0.43 -2.7 1,024,229 - wecA MCAODC_05085 0.43 +1.4 1,024,245 - wecA MCAODC_05085 0.44 -1.6 1,024,253 + wecA MCAODC_05085 0.45 -0.2 1,024,254 - wecA MCAODC_05085 0.45 -3.3 1,024,254 - wecA MCAODC_05085 0.45 -1.9 1,024,254 - wecA MCAODC_05085 0.45 -4.4 1,024,262 + wecA MCAODC_05085 0.46 -2.6 1,024,262 + wecA MCAODC_05085 0.46 -3.0 1,024,262 + wecA MCAODC_05085 0.46 -4.0 1,024,262 + wecA MCAODC_05085 0.46 -1.9 1,024,262 + wecA MCAODC_05085 0.46 -2.0 1,024,262 + wecA MCAODC_05085 0.46 -2.1 1,024,262 + wecA MCAODC_05085 0.46 -1.5 1,024,262 + wecA MCAODC_05085 0.46 -4.1 1,024,262 + wecA MCAODC_05085 0.46 -2.2 1,024,263 - wecA MCAODC_05085 0.46 -0.2 1,024,263 - wecA MCAODC_05085 0.46 -1.8 1,024,263 - wecA MCAODC_05085 0.46 -1.8 1,024,263 - wecA MCAODC_05085 0.46 -2.9 1,024,263 - wecA MCAODC_05085 0.46 -3.0 1,024,263 - wecA MCAODC_05085 0.46 -0.3 1,024,263 - wecA MCAODC_05085 0.46 -1.3 1,024,263 - wecA MCAODC_05085 0.46 -0.0 1,024,263 - wecA MCAODC_05085 0.46 -1.8 1,024,263 - wecA MCAODC_05085 0.46 -2.6 1,024,263 - wecA MCAODC_05085 0.46 -0.9 1,024,263 - wecA MCAODC_05085 0.46 -4.3 1,024,264 + wecA MCAODC_05085 0.46 -4.0 1,024,264 + wecA MCAODC_05085 0.46 -2.3 1,024,264 + wecA MCAODC_05085 0.46 -1.3 1,024,264 + wecA MCAODC_05085 0.46 -2.4 1,024,264 + wecA MCAODC_05085 0.46 -1.3 1,024,265 - wecA MCAODC_05085 0.46 -1.8 1,024,265 - wecA MCAODC_05085 0.46 -3.2 1,024,265 - wecA MCAODC_05085 0.46 -1.4 1,024,265 - wecA MCAODC_05085 0.46 -1.8 1,024,412 + wecA MCAODC_05085 0.59 -2.1 1,024,435 - wecA MCAODC_05085 0.62 -3.9 1,024,487 + wecA MCAODC_05085 0.66 -1.0 1,024,487 + wecA MCAODC_05085 0.66 -3.3 1,024,487 + wecA MCAODC_05085 0.66 -3.7 1,024,488 - wecA MCAODC_05085 0.66 -0.9 1,024,488 - wecA MCAODC_05085 0.66 -1.9 1,024,488 - wecA MCAODC_05085 0.66 -3.0 1,024,488 - wecA MCAODC_05085 0.66 -3.9 1,024,488 - wecA MCAODC_05085 0.66 -3.2 1,024,490 - wecA MCAODC_05085 0.66 -2.6 1,024,490 - wecA MCAODC_05085 0.66 -2.6 1,024,490 - wecA MCAODC_05085 0.66 -3.1 1,024,490 - wecA MCAODC_05085 0.66 -1.8 1,024,490 - wecA MCAODC_05085 0.66 -3.5 1,024,490 - wecA MCAODC_05085 0.66 -1.2 1,024,500 - wecA MCAODC_05085 0.67 -3.7 1,024,507 + wecA MCAODC_05085 0.68 -4.2 1,024,507 + wecA MCAODC_05085 0.68 +0.6 1,024,507 + wecA MCAODC_05085 0.68 -3.1 1,024,529 + wecA MCAODC_05085 0.70 -1.5 1,024,529 + wecA MCAODC_05085 0.70 -3.9 1,024,529 + wecA MCAODC_05085 0.70 -0.3 1,024,529 + wecA MCAODC_05085 0.70 -2.3 1,024,529 + wecA MCAODC_05085 0.70 -2.3 1,024,530 - wecA MCAODC_05085 0.70 -4.5 1,024,530 - wecA MCAODC_05085 0.70 -1.5 1,024,530 - wecA MCAODC_05085 0.70 -4.3 1,024,551 + wecA MCAODC_05085 0.72 -3.9 1,024,552 - wecA MCAODC_05085 0.72 -3.1 1,024,634 - wecA MCAODC_05085 0.80 -4.1 1,024,652 + wecA MCAODC_05085 0.81 -2.5 1,024,652 + wecA MCAODC_05085 0.81 -3.1 1,024,652 + wecA MCAODC_05085 0.81 -1.6 1,024,653 - wecA MCAODC_05085 0.81 -3.0 1,024,654 + wecA MCAODC_05085 0.81 -3.1 1,024,654 + wecA MCAODC_05085 0.81 -2.6 1,024,655 - wecA MCAODC_05085 0.81 -2.1 1,024,655 - wecA MCAODC_05085 0.81 -0.8 1,024,655 - wecA MCAODC_05085 0.81 -2.2 1,024,655 - wecA MCAODC_05085 0.81 -3.4 1,024,655 - wecA MCAODC_05085 0.81 -2.5 1,024,655 - wecA MCAODC_05085 0.81 -0.2 1,024,655 - wecA MCAODC_05085 0.81 -3.1 1,024,655 - wecA MCAODC_05085 0.81 -3.1 1,024,657 + wecA MCAODC_05085 0.82 -4.6 1,024,657 + wecA MCAODC_05085 0.82 -2.0 1,024,720 - wecA MCAODC_05085 0.87 -1.7 1,024,720 - wecA MCAODC_05085 0.87 -3.3 1,024,762 - -4.4 1,024,824 - -1.9 1,024,839 - -2.4 1,024,851 + -0.0 1,024,885 + -3.9 1,024,894 + MCAODC_05090 0.11 -2.6 1,024,894 + MCAODC_05090 0.11 -3.9 1,024,895 - MCAODC_05090 0.11 -2.6 1,024,895 - MCAODC_05090 0.11 -1.0 1,024,896 + MCAODC_05090 0.11 -3.6 1,024,896 + MCAODC_05090 0.11 -3.9 1,024,912 + MCAODC_05090 0.19 -3.3 1,024,985 + MCAODC_05090 0.52 -3.7 1,025,015 + MCAODC_05090 0.66 -4.7 1,025,036 - MCAODC_05090 0.75 +2.4 1,025,042 - MCAODC_05090 0.78 +0.3 1,025,042 - MCAODC_05090 0.78 -1.6 1,025,047 + MCAODC_05090 0.80 -2.3 1,025,047 + MCAODC_05090 0.80 -3.4 1,025,047 + MCAODC_05090 0.80 -0.6 1,025,047 + MCAODC_05090 0.80 -0.9 1,025,048 - MCAODC_05090 0.81 +0.4 1,025,048 - MCAODC_05090 0.81 -0.6 1,025,049 + MCAODC_05090 0.81 -1.8 1,025,049 + MCAODC_05090 0.81 -1.5 1,025,050 - MCAODC_05090 0.82 -0.5 1,025,050 - MCAODC_05090 0.82 -1.1 1,025,050 - MCAODC_05090 0.82 -0.4 1,025,050 - MCAODC_05090 0.82 -0.7 1,025,050 - MCAODC_05090 0.82 -2.0 1,025,067 + MCAODC_05090 0.89 -2.2 1,025,068 - +1.3 1,025,068 - +2.0 1,025,089 + -0.6 1,025,089 + -0.5 1,025,101 - -0.6
Or see this region's nucleotide sequence