Experiment: WM_EV240
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt malE and malF are separated by 153 nucleotides malF and malG are separated by 14 nucleotides
MCAODC_03615: malE - maltose/maltodextrin ABC transporter substrate-binding protein MalE, at 725,218 to 726,408
malE
MCAODC_03625: malF - maltose ABC transporter permease MalF, at 726,562 to 728,106
malF
MCAODC_03630: malG - maltose ABC transporter permease MalG, at 728,121 to 729,011
malG
Position (kb) 726
727
728
729 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 725.571 kb on + strand, within malE at 725.586 kb on - strand, within malE at 725.586 kb on - strand, within malE at 725.590 kb on + strand, within malE at 725.590 kb on + strand, within malE at 725.590 kb on + strand, within malE at 725.644 kb on + strand, within malE at 725.645 kb on - strand, within malE at 725.645 kb on - strand, within malE at 725.647 kb on - strand, within malE at 725.724 kb on + strand, within malE at 725.758 kb on + strand, within malE at 725.758 kb on + strand, within malE at 725.758 kb on + strand, within malE at 725.758 kb on + strand, within malE at 725.758 kb on + strand, within malE at 725.758 kb on + strand, within malE at 725.759 kb on - strand, within malE at 725.759 kb on - strand, within malE at 725.759 kb on - strand, within malE at 725.759 kb on - strand, within malE at 725.794 kb on + strand, within malE at 725.806 kb on + strand, within malE at 725.807 kb on - strand, within malE at 725.807 kb on - strand, within malE at 725.807 kb on - strand, within malE at 725.829 kb on + strand, within malE at 725.829 kb on + strand, within malE at 725.946 kb on + strand, within malE at 725.947 kb on - strand, within malE at 725.949 kb on + strand, within malE at 725.950 kb on - strand, within malE at 725.950 kb on - strand, within malE at 725.971 kb on - strand, within malE at 726.026 kb on + strand, within malE at 726.026 kb on + strand, within malE at 726.027 kb on - strand, within malE at 726.027 kb on - strand, within malE at 726.060 kb on + strand, within malE at 726.060 kb on + strand, within malE at 726.061 kb on - strand, within malE at 726.061 kb on - strand, within malE at 726.061 kb on - strand, within malE at 726.091 kb on - strand, within malE at 726.177 kb on + strand, within malE at 726.178 kb on - strand, within malE at 726.243 kb on + strand, within malE at 726.243 kb on + strand, within malE at 726.243 kb on + strand, within malE at 726.244 kb on - strand, within malE at 726.244 kb on - strand, within malE at 726.244 kb on - strand, within malE at 726.244 kb on - strand, within malE at 726.327 kb on + strand at 726.397 kb on - strand at 726.407 kb on - strand at 726.407 kb on - strand at 726.407 kb on - strand at 726.407 kb on - strand at 726.407 kb on - strand at 726.467 kb on - strand at 726.467 kb on - strand at 726.467 kb on - strand at 726.467 kb on - strand at 726.471 kb on - strand at 726.471 kb on - strand at 726.471 kb on - strand at 726.534 kb on + strand at 726.573 kb on + strand at 726.620 kb on + strand at 726.620 kb on + strand at 726.660 kb on - strand at 726.660 kb on - strand at 726.660 kb on - strand at 726.664 kb on + strand at 726.664 kb on + strand at 726.664 kb on + strand at 726.665 kb on - strand at 726.679 kb on + strand at 726.679 kb on + strand at 726.679 kb on + strand at 726.680 kb on - strand at 726.724 kb on + strand, within malF at 726.725 kb on - strand, within malF at 726.725 kb on - strand, within malF at 726.725 kb on - strand, within malF at 726.727 kb on - strand, within malF at 726.748 kb on + strand, within malF at 726.748 kb on + strand, within malF at 726.749 kb on - strand, within malF at 726.791 kb on + strand, within malF at 726.791 kb on + strand, within malF at 726.791 kb on + strand, within malF at 726.841 kb on + strand, within malF at 726.842 kb on - strand, within malF at 726.842 kb on - strand, within malF at 726.842 kb on - strand, within malF at 726.890 kb on + strand, within malF at 726.890 kb on + strand, within malF at 726.891 kb on - strand, within malF at 726.891 kb on - strand, within malF at 726.891 kb on - strand, within malF at 726.891 kb on - strand, within malF at 726.920 kb on - strand, within malF at 726.920 kb on - strand, within malF at 726.920 kb on - strand, within malF at 726.920 kb on - strand, within malF at 726.991 kb on + strand, within malF at 727.009 kb on - strand, within malF at 727.009 kb on - strand, within malF at 727.225 kb on - strand, within malF at 727.271 kb on - strand, within malF at 727.271 kb on - strand, within malF at 727.314 kb on - strand, within malF at 727.324 kb on + strand, within malF at 727.681 kb on - strand, within malF at 727.708 kb on + strand, within malF at 727.708 kb on + strand, within malF at 727.760 kb on - strand, within malF at 727.813 kb on - strand, within malF at 727.901 kb on + strand, within malF at 727.950 kb on + strand, within malF at 727.950 kb on + strand, within malF at 727.951 kb on - strand, within malF at 727.951 kb on - strand, within malF at 727.951 kb on - strand, within malF at 727.965 kb on + strand at 727.965 kb on + strand at 727.969 kb on + strand at 727.969 kb on + strand at 727.970 kb on - strand at 727.970 kb on - strand at 727.975 kb on + strand at 727.976 kb on - strand at 727.976 kb on - strand at 727.976 kb on - strand at 728.104 kb on + strand at 728.113 kb on + strand at 728.163 kb on - strand at 728.166 kb on - strand at 728.166 kb on - strand at 728.176 kb on + strand at 728.177 kb on - strand at 728.177 kb on - strand at 728.182 kb on + strand at 728.182 kb on + strand at 728.183 kb on - strand at 728.201 kb on + strand at 728.201 kb on + strand at 728.201 kb on + strand at 728.201 kb on + strand at 728.228 kb on + strand, within malG at 728.229 kb on - strand, within malG at 728.308 kb on + strand, within malG at 728.308 kb on + strand, within malG at 728.309 kb on - strand, within malG at 728.442 kb on + strand, within malG at 728.521 kb on + strand, within malG at 728.521 kb on + strand, within malG at 728.541 kb on + strand, within malG at 728.542 kb on - strand, within malG at 728.542 kb on - strand, within malG at 728.569 kb on - strand, within malG at 728.569 kb on - strand, within malG at 728.591 kb on + strand, within malG at 728.591 kb on + strand, within malG at 728.591 kb on + strand, within malG at 728.659 kb on - strand, within malG at 728.756 kb on - strand, within malG at 728.773 kb on + strand, within malG at 728.789 kb on + strand, within malG at 728.802 kb on - strand, within malG at 728.847 kb on + strand, within malG at 728.847 kb on + strand, within malG at 728.847 kb on + strand, within malG at 728.847 kb on + strand, within malG at 728.848 kb on - strand, within malG at 728.848 kb on - strand, within malG at 728.892 kb on + strand, within malG at 729.009 kb on + strand at 729.033 kb on - strand at 729.053 kb on + strand at 729.053 kb on + strand at 729.053 kb on + strand at 729.053 kb on + strand at 729.053 kb on + strand at 729.054 kb on - strand at 729.054 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction WM_EV240 remove 725,571 + malE MCAODC_03615 0.30 -0.2 725,586 - malE MCAODC_03615 0.31 -0.2 725,586 - malE MCAODC_03615 0.31 -0.8 725,590 + malE MCAODC_03615 0.31 -0.4 725,590 + malE MCAODC_03615 0.31 -1.6 725,590 + malE MCAODC_03615 0.31 +1.2 725,644 + malE MCAODC_03615 0.36 +0.1 725,645 - malE MCAODC_03615 0.36 -0.7 725,645 - malE MCAODC_03615 0.36 +1.5 725,647 - malE MCAODC_03615 0.36 +0.3 725,724 + malE MCAODC_03615 0.42 +0.2 725,758 + malE MCAODC_03615 0.45 -2.7 725,758 + malE MCAODC_03615 0.45 +0.0 725,758 + malE MCAODC_03615 0.45 +0.4 725,758 + malE MCAODC_03615 0.45 +0.2 725,758 + malE MCAODC_03615 0.45 -0.7 725,758 + malE MCAODC_03615 0.45 +0.1 725,759 - malE MCAODC_03615 0.45 +0.8 725,759 - malE MCAODC_03615 0.45 +1.0 725,759 - malE MCAODC_03615 0.45 -0.3 725,759 - malE MCAODC_03615 0.45 +1.9 725,794 + malE MCAODC_03615 0.48 +1.0 725,806 + malE MCAODC_03615 0.49 +0.9 725,807 - malE MCAODC_03615 0.49 +0.4 725,807 - malE MCAODC_03615 0.49 -1.4 725,807 - malE MCAODC_03615 0.49 +0.7 725,829 + malE MCAODC_03615 0.51 -1.7 725,829 + malE MCAODC_03615 0.51 +0.1 725,946 + malE MCAODC_03615 0.61 +0.1 725,947 - malE MCAODC_03615 0.61 -0.2 725,949 + malE MCAODC_03615 0.61 -0.2 725,950 - malE MCAODC_03615 0.61 -1.3 725,950 - malE MCAODC_03615 0.61 -1.1 725,971 - malE MCAODC_03615 0.63 +0.4 726,026 + malE MCAODC_03615 0.68 +0.8 726,026 + malE MCAODC_03615 0.68 +0.4 726,027 - malE MCAODC_03615 0.68 -1.2 726,027 - malE MCAODC_03615 0.68 -0.3 726,060 + malE MCAODC_03615 0.71 -0.8 726,060 + malE MCAODC_03615 0.71 -0.3 726,061 - malE MCAODC_03615 0.71 +1.3 726,061 - malE MCAODC_03615 0.71 +0.9 726,061 - malE MCAODC_03615 0.71 -0.1 726,091 - malE MCAODC_03615 0.73 -1.0 726,177 + malE MCAODC_03615 0.81 +0.6 726,178 - malE MCAODC_03615 0.81 +1.6 726,243 + malE MCAODC_03615 0.86 +3.1 726,243 + malE MCAODC_03615 0.86 +0.4 726,243 + malE MCAODC_03615 0.86 -0.2 726,244 - malE MCAODC_03615 0.86 -0.7 726,244 - malE MCAODC_03615 0.86 +0.1 726,244 - malE MCAODC_03615 0.86 -0.2 726,244 - malE MCAODC_03615 0.86 -0.2 726,327 + +0.5 726,397 - +0.3 726,407 - +0.1 726,407 - -1.4 726,407 - -1.2 726,407 - -0.6 726,407 - +1.0 726,467 - +0.2 726,467 - +2.1 726,467 - +0.1 726,467 - +0.5 726,471 - -0.5 726,471 - +1.1 726,471 - +0.3 726,534 + +0.1 726,573 + -0.8 726,620 + -2.0 726,620 + -3.4 726,660 - -0.2 726,660 - -0.4 726,660 - -0.2 726,664 + +0.5 726,664 + -0.2 726,664 + -1.7 726,665 - -0.7 726,679 + +0.1 726,679 + -1.1 726,679 + -1.7 726,680 - -0.6 726,724 + malF MCAODC_03625 0.10 -1.3 726,725 - malF MCAODC_03625 0.11 +0.2 726,725 - malF MCAODC_03625 0.11 +1.2 726,725 - malF MCAODC_03625 0.11 -0.2 726,727 - malF MCAODC_03625 0.11 -1.0 726,748 + malF MCAODC_03625 0.12 -0.2 726,748 + malF MCAODC_03625 0.12 +0.2 726,749 - malF MCAODC_03625 0.12 -0.2 726,791 + malF MCAODC_03625 0.15 +0.7 726,791 + malF MCAODC_03625 0.15 +0.0 726,791 + malF MCAODC_03625 0.15 +0.3 726,841 + malF MCAODC_03625 0.18 -0.1 726,842 - malF MCAODC_03625 0.18 +0.6 726,842 - malF MCAODC_03625 0.18 -0.8 726,842 - malF MCAODC_03625 0.18 -0.5 726,890 + malF MCAODC_03625 0.21 -1.5 726,890 + malF MCAODC_03625 0.21 +0.6 726,891 - malF MCAODC_03625 0.21 +0.2 726,891 - malF MCAODC_03625 0.21 -0.4 726,891 - malF MCAODC_03625 0.21 +0.0 726,891 - malF MCAODC_03625 0.21 -1.2 726,920 - malF MCAODC_03625 0.23 +0.4 726,920 - malF MCAODC_03625 0.23 -0.6 726,920 - malF MCAODC_03625 0.23 +0.5 726,920 - malF MCAODC_03625 0.23 -0.3 726,991 + malF MCAODC_03625 0.28 -0.2 727,009 - malF MCAODC_03625 0.29 +0.1 727,009 - malF MCAODC_03625 0.29 -0.3 727,225 - malF MCAODC_03625 0.43 +0.1 727,271 - malF MCAODC_03625 0.46 +0.8 727,271 - malF MCAODC_03625 0.46 -0.2 727,314 - malF MCAODC_03625 0.49 -1.0 727,324 + malF MCAODC_03625 0.49 -0.5 727,681 - malF MCAODC_03625 0.72 -0.1 727,708 + malF MCAODC_03625 0.74 -0.1 727,708 + malF MCAODC_03625 0.74 -0.2 727,760 - malF MCAODC_03625 0.78 +0.2 727,813 - malF MCAODC_03625 0.81 +0.3 727,901 + malF MCAODC_03625 0.87 -0.0 727,950 + malF MCAODC_03625 0.90 -0.4 727,950 + malF MCAODC_03625 0.90 +0.4 727,951 - malF MCAODC_03625 0.90 +0.5 727,951 - malF MCAODC_03625 0.90 -1.7 727,951 - malF MCAODC_03625 0.90 -1.5 727,965 + +2.0 727,965 + -0.5 727,969 + +0.3 727,969 + +0.9 727,970 - -1.4 727,970 - -2.3 727,975 + -0.5 727,976 - -0.2 727,976 - -1.7 727,976 - -1.9 728,104 + -0.4 728,113 + +0.4 728,163 - +0.2 728,166 - -0.5 728,166 - -1.5 728,176 + -0.3 728,177 - +0.8 728,177 - -0.3 728,182 + -0.1 728,182 + +0.8 728,183 - -0.2 728,201 + -1.2 728,201 + -1.4 728,201 + +0.0 728,201 + -2.5 728,228 + malG MCAODC_03630 0.12 -1.3 728,229 - malG MCAODC_03630 0.12 +0.6 728,308 + malG MCAODC_03630 0.21 -1.1 728,308 + malG MCAODC_03630 0.21 -0.7 728,309 - malG MCAODC_03630 0.21 -0.1 728,442 + malG MCAODC_03630 0.36 +0.2 728,521 + malG MCAODC_03630 0.45 -0.1 728,521 + malG MCAODC_03630 0.45 -0.5 728,541 + malG MCAODC_03630 0.47 +0.3 728,542 - malG MCAODC_03630 0.47 -0.7 728,542 - malG MCAODC_03630 0.47 +1.7 728,569 - malG MCAODC_03630 0.50 -1.8 728,569 - malG MCAODC_03630 0.50 -0.7 728,591 + malG MCAODC_03630 0.53 -1.4 728,591 + malG MCAODC_03630 0.53 -0.1 728,591 + malG MCAODC_03630 0.53 -0.3 728,659 - malG MCAODC_03630 0.60 -0.5 728,756 - malG MCAODC_03630 0.71 -1.1 728,773 + malG MCAODC_03630 0.73 -0.2 728,789 + malG MCAODC_03630 0.75 +1.3 728,802 - malG MCAODC_03630 0.76 -0.1 728,847 + malG MCAODC_03630 0.81 -1.0 728,847 + malG MCAODC_03630 0.81 -0.5 728,847 + malG MCAODC_03630 0.81 -0.7 728,847 + malG MCAODC_03630 0.81 -0.4 728,848 - malG MCAODC_03630 0.82 -1.3 728,848 - malG MCAODC_03630 0.82 +0.4 728,892 + malG MCAODC_03630 0.87 -0.4 729,009 + +0.2 729,033 - +0.3 729,053 + -0.0 729,053 + -0.3 729,053 + +1.3 729,053 + +0.0 729,053 + -1.0 729,054 - +0.1 729,054 - -0.1
Or see this region's nucleotide sequence