Experiment: WM_EV240
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt dnaT and dnaC are separated by 2 nucleotides dnaC and yjjA are separated by 48 nucleotides yjjA and opgB are separated by 253 nucleotides
MCAODC_01855: dnaT - primosomal protein DnaT, at 355,766 to 356,305
dnaT
MCAODC_01860: dnaC - DNA replication protein DnaC, at 356,308 to 357,045
dnaC
MCAODC_01865: yjjA - Uncharacterized protein YjjA, at 357,094 to 357,588
yjjA
MCAODC_01870: opgB - phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase, at 357,842 to 360,133
opgB
Position (kb) 357
358 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 357.026 kb on + strand at 357.026 kb on + strand at 357.040 kb on + strand at 357.043 kb on + strand at 357.044 kb on - strand at 357.044 kb on - strand at 357.044 kb on - strand at 357.063 kb on - strand at 357.065 kb on - strand at 357.089 kb on + strand at 357.109 kb on - strand at 357.260 kb on + strand, within yjjA at 357.260 kb on + strand, within yjjA at 357.260 kb on + strand, within yjjA at 357.260 kb on + strand, within yjjA at 357.260 kb on + strand, within yjjA at 357.261 kb on - strand, within yjjA at 357.264 kb on + strand, within yjjA at 357.264 kb on + strand, within yjjA at 357.264 kb on + strand, within yjjA at 357.265 kb on - strand, within yjjA at 357.265 kb on - strand, within yjjA at 357.273 kb on + strand, within yjjA at 357.273 kb on + strand, within yjjA at 357.293 kb on + strand, within yjjA at 357.293 kb on + strand, within yjjA at 357.303 kb on + strand, within yjjA at 357.303 kb on + strand, within yjjA at 357.303 kb on + strand, within yjjA at 357.304 kb on - strand, within yjjA at 357.304 kb on - strand, within yjjA at 357.304 kb on - strand, within yjjA at 357.676 kb on + strand at 357.677 kb on - strand at 357.718 kb on + strand at 357.719 kb on - strand at 357.778 kb on + strand at 357.778 kb on + strand at 357.778 kb on + strand at 357.778 kb on + strand at 357.778 kb on + strand at 357.779 kb on - strand at 357.779 kb on - strand at 357.826 kb on + strand at 357.853 kb on - strand at 357.853 kb on - strand at 357.890 kb on + strand at 357.891 kb on - strand at 357.910 kb on + strand at 357.910 kb on + strand at 357.910 kb on + strand at 357.911 kb on - strand at 357.911 kb on - strand at 357.911 kb on - strand at 357.936 kb on + strand at 357.937 kb on - strand at 357.951 kb on + strand at 357.952 kb on - strand at 357.952 kb on - strand at 357.963 kb on + strand at 357.964 kb on - strand at 357.967 kb on + strand at 358.025 kb on + strand at 358.025 kb on + strand at 358.025 kb on + strand at 358.027 kb on + strand at 358.027 kb on + strand at 358.027 kb on + strand at 358.028 kb on - strand at 358.032 kb on + strand at 358.033 kb on - strand at 358.286 kb on + strand, within opgB at 358.287 kb on - strand, within opgB at 358.289 kb on + strand, within opgB at 358.289 kb on + strand, within opgB at 358.289 kb on + strand, within opgB at 358.289 kb on + strand, within opgB at 358.290 kb on - strand, within opgB at 358.290 kb on - strand, within opgB at 358.290 kb on - strand, within opgB at 358.290 kb on - strand, within opgB at 358.290 kb on - strand, within opgB at 358.310 kb on - strand, within opgB at 358.337 kb on + strand, within opgB at 358.338 kb on - strand, within opgB at 358.338 kb on - strand, within opgB at 358.338 kb on - strand, within opgB at 358.338 kb on - strand, within opgB at 358.338 kb on - strand, within opgB at 358.338 kb on - strand, within opgB at 358.339 kb on + strand, within opgB at 358.339 kb on + strand, within opgB at 358.339 kb on + strand, within opgB at 358.340 kb on - strand, within opgB at 358.340 kb on - strand, within opgB at 358.340 kb on - strand, within opgB at 358.343 kb on + strand, within opgB at 358.344 kb on - strand, within opgB at 358.368 kb on - strand, within opgB at 358.469 kb on + strand, within opgB at 358.469 kb on + strand, within opgB at 358.470 kb on - strand, within opgB
Per-strain Table
Position Strand Gene LocusTag Fraction WM_EV240 remove 357,026 + +1.9 357,026 + -1.4 357,040 + -0.5 357,043 + +2.6 357,044 - +2.0 357,044 - +0.2 357,044 - +0.4 357,063 - -1.6 357,065 - -0.8 357,089 + +0.7 357,109 - -0.7 357,260 + yjjA MCAODC_01865 0.34 +1.2 357,260 + yjjA MCAODC_01865 0.34 +1.2 357,260 + yjjA MCAODC_01865 0.34 -0.3 357,260 + yjjA MCAODC_01865 0.34 -0.7 357,260 + yjjA MCAODC_01865 0.34 +2.0 357,261 - yjjA MCAODC_01865 0.34 +0.9 357,264 + yjjA MCAODC_01865 0.34 -0.8 357,264 + yjjA MCAODC_01865 0.34 +0.1 357,264 + yjjA MCAODC_01865 0.34 -1.8 357,265 - yjjA MCAODC_01865 0.35 -0.6 357,265 - yjjA MCAODC_01865 0.35 +0.7 357,273 + yjjA MCAODC_01865 0.36 +0.3 357,273 + yjjA MCAODC_01865 0.36 +0.7 357,293 + yjjA MCAODC_01865 0.40 +0.0 357,293 + yjjA MCAODC_01865 0.40 +0.1 357,303 + yjjA MCAODC_01865 0.42 -0.8 357,303 + yjjA MCAODC_01865 0.42 -0.6 357,303 + yjjA MCAODC_01865 0.42 -0.0 357,304 - yjjA MCAODC_01865 0.42 +1.4 357,304 - yjjA MCAODC_01865 0.42 -0.5 357,304 - yjjA MCAODC_01865 0.42 -1.7 357,676 + +0.7 357,677 - -0.1 357,718 + +0.7 357,719 - -1.2 357,778 + -1.2 357,778 + +0.2 357,778 + -0.1 357,778 + +0.1 357,778 + +1.1 357,779 - +1.7 357,779 - -3.0 357,826 + -0.4 357,853 - +0.2 357,853 - +0.4 357,890 + -0.5 357,891 - +0.2 357,910 + -0.1 357,910 + +1.0 357,910 + +1.2 357,911 - +0.4 357,911 - -1.0 357,911 - -0.8 357,936 + -0.5 357,937 - +0.9 357,951 + -0.9 357,952 - +0.5 357,952 - +0.8 357,963 + +0.2 357,964 - +0.5 357,967 + +0.2 358,025 + -1.2 358,025 + +0.6 358,025 + -0.3 358,027 + -0.3 358,027 + +1.4 358,027 + -0.7 358,028 - +0.0 358,032 + -1.1 358,033 - +0.7 358,286 + opgB MCAODC_01870 0.19 +1.4 358,287 - opgB MCAODC_01870 0.19 +0.3 358,289 + opgB MCAODC_01870 0.20 +1.4 358,289 + opgB MCAODC_01870 0.20 -0.2 358,289 + opgB MCAODC_01870 0.20 +0.1 358,289 + opgB MCAODC_01870 0.20 -1.2 358,290 - opgB MCAODC_01870 0.20 +0.6 358,290 - opgB MCAODC_01870 0.20 -1.1 358,290 - opgB MCAODC_01870 0.20 -0.3 358,290 - opgB MCAODC_01870 0.20 +0.4 358,290 - opgB MCAODC_01870 0.20 +1.0 358,310 - opgB MCAODC_01870 0.20 +0.4 358,337 + opgB MCAODC_01870 0.22 -0.7 358,338 - opgB MCAODC_01870 0.22 -1.0 358,338 - opgB MCAODC_01870 0.22 +0.0 358,338 - opgB MCAODC_01870 0.22 -0.8 358,338 - opgB MCAODC_01870 0.22 -0.3 358,338 - opgB MCAODC_01870 0.22 +0.1 358,338 - opgB MCAODC_01870 0.22 +0.4 358,339 + opgB MCAODC_01870 0.22 -0.3 358,339 + opgB MCAODC_01870 0.22 -1.4 358,339 + opgB MCAODC_01870 0.22 -0.9 358,340 - opgB MCAODC_01870 0.22 +0.4 358,340 - opgB MCAODC_01870 0.22 +0.9 358,340 - opgB MCAODC_01870 0.22 -0.3 358,343 + opgB MCAODC_01870 0.22 -0.2 358,344 - opgB MCAODC_01870 0.22 -0.1 358,368 - opgB MCAODC_01870 0.23 +0.3 358,469 + opgB MCAODC_01870 0.27 -0.6 358,469 + opgB MCAODC_01870 0.27 -2.8 358,470 - opgB MCAODC_01870 0.27 -0.3
Or see this region's nucleotide sequence