Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS22045

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
2,965,836	+		ABI39_RS11080	0.20	+0.2
2,965,838	+		ABI39_RS11080	0.20	+1.0
2,965,855	+		ABI39_RS11080	0.22	+0.3
2,965,860	+		ABI39_RS11080	0.22	+0.1
2,965,910	-		ABI39_RS11080	0.26	+0.5
2,965,910	-		ABI39_RS11080	0.26	+3.3
2,965,912	+		ABI39_RS11080	0.27	-0.1
2,965,912	+		ABI39_RS11080	0.27	+0.2
2,965,912	+		ABI39_RS11080	0.27	-0.3
2,965,913	-		ABI39_RS11080	0.27	+2.0
2,965,924	-		ABI39_RS11080	0.28	+1.0
2,965,924	-		ABI39_RS11080	0.28	-0.0
2,965,924	-		ABI39_RS11080	0.28	-0.5
2,965,934	-		ABI39_RS11080	0.28	+2.4
2,966,027	+		ABI39_RS11080	0.36	+0.1
2,966,038	+		ABI39_RS11080	0.37	+0.4
2,966,067	+		ABI39_RS11080	0.39	-0.6
2,966,106	-		ABI39_RS11080	0.43	+0.5
2,966,252	-		ABI39_RS11080	0.55	+0.5
2,966,269	+		ABI39_RS11080	0.56	+0.8
2,966,286	+		ABI39_RS11080	0.57	+0.5
2,966,305	-		ABI39_RS11080	0.59	-0.0
2,966,368	+		ABI39_RS11080	0.64	+0.7
2,966,369	-		ABI39_RS11080	0.64	-0.5
2,966,385	-		ABI39_RS11080	0.66	-0.0
2,966,429	+		ABI39_RS11080	0.69	+0.9
2,966,433	-		ABI39_RS11080	0.70	+0.7
2,966,472	+		ABI39_RS11080	0.73	+1.0
2,966,483	-		ABI39_RS11080	0.74	+0.4
2,966,514	-		ABI39_RS11080	0.76	+1.5
2,966,536	+		ABI39_RS11080	0.78	+0.8
2,966,558	-		ABI39_RS11080	0.80	-0.5
2,966,664	-		ABI39_RS11080	0.89	-0.1
2,966,777	+				+0.7
2,966,783	-				-0.7
2,966,789	-				-0.7
2,966,794	-				-1.1
2,966,848	+				-0.3
2,966,865	-				+2.2
2,966,925	-		ABI39_RS22045	0.13	+0.8
2,966,937	+		ABI39_RS22045	0.14	+1.2
2,967,003	+		ABI39_RS22045	0.21	+0.7
2,967,004	-		ABI39_RS22045	0.21	+4.1
2,967,025	+		ABI39_RS22045	0.23	+0.3
2,967,059	+		ABI39_RS22045	0.27	+0.2
2,967,098	+		ABI39_RS22045	0.31	-0.1
2,967,125	+		ABI39_RS22045	0.33	-0.2
2,967,236	+		ABI39_RS22045	0.45	+0.9
2,967,268	-		ABI39_RS22045	0.48	+0.9
2,967,289	+		ABI39_RS22045	0.50	+0.0
2,967,293	+		ABI39_RS22045	0.51	+1.1
2,967,408	+		ABI39_RS22045	0.62	+0.1
2,967,412	+		ABI39_RS22045	0.63	+0.5
2,967,512	+		ABI39_RS22045	0.73	+0.6
2,967,513	-		ABI39_RS22045	0.73	+2.0
2,967,530	+		ABI39_RS22045	0.75	+0.5
2,967,574	+		ABI39_RS22045	0.79	+0.3
2,967,618	+		ABI39_RS22045	0.84	+0.1
2,967,618	+		ABI39_RS22045	0.84	+0.5
2,967,767	+				-0.6
2,968,000	-				+0.2
2,968,090	+				+0.2
2,968,090	+				+1.0
2,968,123	-				+0.2
2,968,247	+				+0.4
2,968,290	-		ABI39_RS11090	0.14	+0.3
2,968,354	-		ABI39_RS11090	0.21	+0.4
2,968,428	-		ABI39_RS11090	0.30	+0.0
2,968,513	+		ABI39_RS11090	0.39	+1.3
2,968,518	-		ABI39_RS11090	0.40	-0.1
2,968,585	-		ABI39_RS11090	0.47	-0.6
2,968,611	-		ABI39_RS11090	0.50	+0.2
2,968,611	-		ABI39_RS11090	0.50	+0.6
2,968,611	-		ABI39_RS11090	0.50	+0.5
2,968,611	-		ABI39_RS11090	0.50	-0.1
2,968,619	-		ABI39_RS11090	0.51	+0.9
2,968,630	+		ABI39_RS11090	0.52	-0.7
2,968,634	+		ABI39_RS11090	0.52	+0.3
2,968,634	+		ABI39_RS11090	0.52	+0.5
2,968,634	+		ABI39_RS11090	0.52	+1.4
2,968,635	-		ABI39_RS11090	0.53	+0.0
2,968,635	-		ABI39_RS11090	0.53	-0.1
2,968,635	-		ABI39_RS11090	0.53	+0.2
2,968,636	+		ABI39_RS11090	0.53	+1.5
2,968,636	+		ABI39_RS11090	0.53	-0.1