Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11060

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
2,960,301	-				+0.6
2,960,318	+				+0.7
2,960,536	-				+0.6
2,960,620	+				+0.2
2,960,779	+		ABI39_RS11055	0.26	+1.0
2,960,837	-		ABI39_RS11055	0.34	+2.2
2,960,899	-		ABI39_RS11055	0.43	+1.5
2,960,914	+		ABI39_RS11055	0.45	-0.6
2,960,915	-		ABI39_RS11055	0.45	+2.5
2,960,945	+		ABI39_RS11055	0.50	+0.6
2,960,997	+		ABI39_RS11055	0.57	+0.0
2,960,998	-		ABI39_RS11055	0.57	+2.0
2,961,067	+		ABI39_RS11055	0.67	+0.5
2,961,068	-		ABI39_RS11055	0.67	+1.1
2,961,093	+		ABI39_RS11055	0.71	+0.6
2,961,126	-		ABI39_RS11055	0.76	+2.9
2,961,240	+				+0.3
2,961,240	+				+0.5
2,961,472	-		ABI39_RS11060	0.30	+1.9
2,961,551	-		ABI39_RS11060	0.44	+2.3
2,961,604	+		ABI39_RS11060	0.53	+0.0
2,961,604	+		ABI39_RS11060	0.53	+0.0
2,961,616	+		ABI39_RS11060	0.55	+0.5
2,961,655	-		ABI39_RS11060	0.61	+1.6
2,961,698	+		ABI39_RS11060	0.69	-0.0
2,961,699	-		ABI39_RS11060	0.69	+0.4
2,961,745	+		ABI39_RS11060	0.76	-0.4
2,961,745	+		ABI39_RS11060	0.76	+0.6
2,961,746	-		ABI39_RS11060	0.77	+1.6
2,961,754	+		ABI39_RS11060	0.78	+0.5
2,961,755	-		ABI39_RS11060	0.78	+0.7
2,961,790	+		ABI39_RS11060	0.84	+0.8
2,961,844	+				-0.5
2,961,844	+				+0.1
2,961,861	-				+1.5
2,961,865	+				+2.1
2,961,926	-				+1.5
2,961,926	-				+0.3
2,961,993	-				+2.0
2,961,993	-				+1.0
2,962,016	+				+0.4
2,962,016	+				+1.9
2,962,017	-				+2.7
2,962,020	+				+0.7
2,962,021	-				+1.6
2,962,031	+				-1.7
2,962,031	+				+0.1
2,962,032	-				+1.8
2,962,040	+		ABI39_RS11065	0.11	-0.1
2,962,154	-		ABI39_RS11065	0.21	+1.4
2,962,180	+		ABI39_RS11065	0.24	+0.3
2,962,185	-		ABI39_RS11065	0.24	+1.5
2,962,241	+		ABI39_RS11065	0.29	+0.3
2,962,265	+		ABI39_RS11065	0.31	+0.1
2,962,282	-		ABI39_RS11065	0.33	+1.9
2,962,352	-		ABI39_RS11065	0.40	+0.5
2,962,368	-		ABI39_RS11065	0.41	+1.5
2,962,419	-		ABI39_RS11065	0.46	+1.6
2,962,439	+		ABI39_RS11065	0.48	-0.7
2,962,587	-		ABI39_RS11065	0.61	+1.3
2,962,596	+		ABI39_RS11065	0.62	-0.4
2,962,618	-		ABI39_RS11065	0.64	+1.8
2,962,708	+		ABI39_RS11065	0.72	+0.5
2,962,808	-		ABI39_RS11065	0.82	+2.5
2,962,867	-		ABI39_RS11065	0.87	+2.7
2,962,867	-		ABI39_RS11065	0.87	+1.4
2,962,879	+		ABI39_RS11065	0.88	-0.1
2,962,879	+		ABI39_RS11065	0.88	+1.4
2,962,879	+		ABI39_RS11065	0.88	+0.7