Strain Fitness in Escherichia coli ECRC101 around MCAODC_24620

Experiment: WM_Bas41

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas41
1,629,349	+				+0.3
1,629,350	-				+1.3
1,629,350	-				+0.0
1,629,350	-				+0.0
1,629,430	+				-0.5
1,629,430	+				-1.2
1,629,597	+	sxy	MCAODC_24615	0.19	-0.3
1,629,668	-	sxy	MCAODC_24615	0.31	+1.1
1,629,668	-	sxy	MCAODC_24615	0.31	-0.7
1,629,668	-	sxy	MCAODC_24615	0.31	-1.1
1,629,669	+	sxy	MCAODC_24615	0.31	+1.7
1,629,669	+	sxy	MCAODC_24615	0.31	-0.2
1,629,669	+	sxy	MCAODC_24615	0.31	+2.5
1,629,669	+	sxy	MCAODC_24615	0.31	+0.7
1,629,670	-	sxy	MCAODC_24615	0.31	-0.8
1,629,670	-	sxy	MCAODC_24615	0.31	-0.2
1,629,674	-	sxy	MCAODC_24615	0.32	+0.3
1,629,674	-	sxy	MCAODC_24615	0.32	-0.8
1,629,683	-	sxy	MCAODC_24615	0.33	+0.3
1,629,690	+	sxy	MCAODC_24615	0.34	-1.0
1,629,732	+	sxy	MCAODC_24615	0.41	+0.1
1,629,733	-	sxy	MCAODC_24615	0.41	-1.3
1,629,733	-	sxy	MCAODC_24615	0.41	+0.2
1,629,842	-	sxy	MCAODC_24615	0.58	-1.2
1,629,860	+	sxy	MCAODC_24615	0.61	+2.5
1,629,861	-	sxy	MCAODC_24615	0.61	+2.2
1,629,863	+	sxy	MCAODC_24615	0.62	-1.0
1,629,864	-	sxy	MCAODC_24615	0.62	-0.4
1,629,895	-	sxy	MCAODC_24615	0.67	+0.1
1,629,895	-	sxy	MCAODC_24615	0.67	-0.8
1,629,895	-	sxy	MCAODC_24615	0.67	-0.5
1,629,895	-	sxy	MCAODC_24615	0.67	-2.5
1,629,896	+	sxy	MCAODC_24615	0.67	-0.0
1,629,897	-	sxy	MCAODC_24615	0.67	-0.2
1,629,929	+	sxy	MCAODC_24615	0.72	+1.3
1,629,929	+	sxy	MCAODC_24615	0.72	+2.2
1,629,929	+	sxy	MCAODC_24615	0.72	+0.5
1,630,061	+				-0.7
1,630,062	-				-1.2
1,630,062	-				+0.7
1,630,062	-				+0.4
1,630,075	-				-0.9
1,630,076	+				+0.5
1,630,088	+				+0.1
1,630,181	-				-0.5
1,630,187	-				+1.6
1,630,205	-				-0.4
1,630,254	-				+2.1
1,630,287	-				-0.2
1,630,322	+				-0.4
1,630,322	+				+1.5
1,630,322	+				-0.8
1,630,322	+				-1.0
1,630,323	-				-0.2
1,630,323	-				-0.6
1,630,323	-				+0.6
1,630,323	-				-0.8
1,630,323	-				-0.8
1,630,323	-				-1.9
1,630,323	-				+1.5
1,630,326	+				+0.8
1,630,338	+				-0.0
1,630,468	+	sulA	MCAODC_24620	0.28	-0.1
1,630,484	-	sulA	MCAODC_24620	0.32	+1.0
1,630,523	-	sulA	MCAODC_24620	0.39	-0.8
1,630,585	+	sulA	MCAODC_24620	0.51	+0.5
1,630,656	+	sulA	MCAODC_24620	0.65	+1.4
1,630,657	-	sulA	MCAODC_24620	0.65	-0.9
1,630,657	-	sulA	MCAODC_24620	0.65	+0.3
1,630,751	+	sulA	MCAODC_24620	0.84	-2.1
1,630,752	-	sulA	MCAODC_24620	0.84	+1.2
1,630,752	-	sulA	MCAODC_24620	0.84	+0.3
1,630,755	-	sulA	MCAODC_24620	0.85	-2.2
1,630,755	-	sulA	MCAODC_24620	0.85	+0.7
1,630,804	+				-1.1
1,630,969	+				-3.0
1,630,976	-				+0.2
1,630,976	-				-0.1
1,630,980	+				-1.1
1,630,980	+				-1.2
1,630,980	+				-0.1
1,630,980	+				-1.1
1,630,982	+				-0.5
1,630,982	+				+1.4
1,630,982	+				+0.6
1,630,982	+				+0.7
1,631,036	+				-0.3
1,631,050	+				-0.6
1,631,050	+				-0.3
1,631,050	+				-1.0
1,631,051	-				+0.3
1,631,073	+				+1.2
1,631,096	+				-1.0
1,631,096	+				-0.1
1,631,127	+				-3.4
1,631,136	+				-0.7
1,631,161	+				+1.2
1,631,263	+				-0.5
1,631,263	+				+0.5
1,631,263	+				-0.8
1,631,263	+				+1.1
1,631,273	+				+0.2
1,631,273	+				+2.8
1,631,284	+				-1.3
1,631,284	+				-0.6
1,631,284	+				-0.0
1,631,284	+				-0.1
1,631,393	+	ompA	MCAODC_24625	0.20	-0.6
1,631,424	+	ompA	MCAODC_24625	0.23	-0.2
1,631,431	+	ompA	MCAODC_24625	0.23	-0.8
1,631,431	+	ompA	MCAODC_24625	0.23	+0.9
1,631,465	+	ompA	MCAODC_24625	0.27	+1.5
1,631,465	+	ompA	MCAODC_24625	0.27	+1.7
1,631,465	+	ompA	MCAODC_24625	0.27	-1.1
1,631,465	+	ompA	MCAODC_24625	0.27	-2.2
1,631,465	+	ompA	MCAODC_24625	0.27	-0.4
1,631,465	+	ompA	MCAODC_24625	0.27	+0.7
1,631,465	+	ompA	MCAODC_24625	0.27	+0.2
1,631,531	+	ompA	MCAODC_24625	0.33	-1.0
1,631,531	+	ompA	MCAODC_24625	0.33	+1.4
1,631,531	+	ompA	MCAODC_24625	0.33	+0.7
1,631,531	+	ompA	MCAODC_24625	0.33	-1.0
1,631,531	+	ompA	MCAODC_24625	0.33	+1.5
1,631,531	+	ompA	MCAODC_24625	0.33	+0.8
1,631,532	-	ompA	MCAODC_24625	0.33	+0.5
1,631,532	-	ompA	MCAODC_24625	0.33	+4.1
1,631,553	+	ompA	MCAODC_24625	0.35	+0.0
1,631,784	+	ompA	MCAODC_24625	0.57	+1.2
1,631,784	+	ompA	MCAODC_24625	0.57	+2.1