Strain Fitness in Escherichia coli ECRC101 around MCAODC_00745

Experiment: WM_Bas41

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntrpsB and map are separated by 367 nucleotidesmap and glnD are separated by 61 nucleotides MCAODC_00735: rpsB - 30S ribosomal protein S2, at 123,125 to 123,850 rpsB MCAODC_00745: map - type I methionyl aminopeptidase, at 124,218 to 125,012 map MCAODC_00750: glnD - bifunctional uridylyltransferase/uridylyl-removing protein GlnD, at 125,074 to 127,746 glnD Position (kb) 124 125 126Strain fitness (log2 ratio) -3 -2 -1 0 1at 124.091 kb on - strandat 124.093 kb on + strandat 124.094 kb on - strandat 124.095 kb on + strandat 124.095 kb on + strandat 124.096 kb on - strandat 124.096 kb on - strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.178 kb on + strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 124.179 kb on - strandat 125.048 kb on + strandat 125.053 kb on + strandat 125.181 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_Bas41
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124,091 - -0.2
124,093 + -3.1
124,094 - +0.3
124,095 + -0.3
124,095 + -0.2
124,096 - +0.9
124,096 - -0.2
124,178 + +1.6
124,178 + +0.6
124,178 + +0.0
124,178 + +0.3
124,178 + -2.8
124,178 + +0.1
124,178 + -0.3
124,178 + -0.6
124,178 + -0.3
124,178 + +0.1
124,178 + -0.1
124,178 + +0.7
124,178 + -0.8
124,179 - +0.3
124,179 - +1.1
124,179 - +0.7
124,179 - -0.5
124,179 - -0.4
124,179 - -1.0
124,179 - +1.7
124,179 - +1.1
124,179 - -1.1
124,179 - -0.8
124,179 - -0.4
124,179 - +0.3
124,179 - +0.8
124,179 - +0.0
125,048 + -0.8
125,053 + -0.2
125,181 - +0.9

Or see this region's nucleotide sequence