Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS21440

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
5,291,650	+		ABI39_RS21435	0.66	+1.8
5,291,700	-		ABI39_RS21435	0.68	+0.2
5,291,710	+		ABI39_RS21435	0.69	-1.1
5,291,711	-		ABI39_RS21435	0.69	+0.2
5,291,900	+		ABI39_RS21435	0.76	+0.2
5,291,928	-		ABI39_RS21435	0.77	-0.8
5,291,994	+		ABI39_RS21435	0.79	-0.9
5,292,082	-		ABI39_RS21435	0.82	+1.1
5,292,082	-		ABI39_RS21435	0.82	-0.0
5,292,116	-		ABI39_RS21435	0.84	+0.2
5,292,230	+		ABI39_RS21435	0.88	-1.5
5,292,230	+		ABI39_RS21435	0.88	+1.0
5,292,230	+		ABI39_RS21435	0.88	+0.1
5,292,256	+		ABI39_RS21435	0.89	-0.3
5,292,312	-				-1.2
5,292,364	+				-1.5
5,292,466	+				-1.2
5,292,467	-				+0.7
5,292,565	+				-0.0
5,292,569	-				+0.3
5,292,569	-				-1.5
5,292,570	+				+0.7
5,292,572	+				+0.5
5,292,573	-				+1.5
5,292,653	+				+0.1
5,292,654	-				-0.2
5,292,698	+		ABI39_RS21440	0.24	-0.5
5,292,733	+		ABI39_RS21440	0.41	-1.1
5,292,748	+		ABI39_RS21440	0.48	+0.4
5,292,757	-		ABI39_RS21440	0.52	-0.8
5,292,793	+		ABI39_RS21440	0.70	-1.5
5,292,873	-				+1.5
5,292,894	-				-1.6
5,292,906	-				-0.3
5,292,949	+				-0.2
5,292,975	+				+0.9
5,292,979	+				-1.8
5,293,001	+				+0.4
5,293,075	-		ABI39_RS21445	0.11	-0.0
5,293,084	+		ABI39_RS21445	0.13	-0.2
5,293,116	+		ABI39_RS21445	0.16	+1.0
5,293,138	-		ABI39_RS21445	0.19	+0.4
5,293,179	+		ABI39_RS21445	0.24	+0.7
5,293,179	+		ABI39_RS21445	0.24	+0.6
5,293,180	-		ABI39_RS21445	0.24	+1.2
5,293,254	+		ABI39_RS21445	0.33	+1.0
5,293,254	+		ABI39_RS21445	0.33	-0.3
5,293,255	-		ABI39_RS21445	0.33	-0.1
5,293,302	+		ABI39_RS21445	0.39	-1.4
5,293,303	-		ABI39_RS21445	0.39	+0.8
5,293,310	-		ABI39_RS21445	0.40	-0.3
5,293,310	-		ABI39_RS21445	0.40	-2.0
5,293,351	-		ABI39_RS21445	0.45	+0.7
5,293,360	+		ABI39_RS21445	0.46	+0.9
5,293,497	+		ABI39_RS21445	0.62	+1.0
5,293,498	-		ABI39_RS21445	0.63	-0.7
5,293,498	-		ABI39_RS21445	0.63	+0.6
5,293,574	-		ABI39_RS21445	0.72	+0.2
5,293,640	+		ABI39_RS21445	0.80	-0.2
5,293,669	-		ABI39_RS21445	0.83	-0.3
5,293,813	+				+0.2