Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17805

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
4,491,481	+				-1.8
4,491,481	+				-0.2
4,491,481	+				-0.5
4,491,489	+				+0.8
4,491,539	-				-2.6
4,491,671	+				+0.1
4,491,858	+		ABI39_RS17805	0.19	-1.4
4,491,859	-		ABI39_RS17805	0.19	-1.3
4,491,891	+		ABI39_RS17805	0.22	+1.1
4,491,905	-		ABI39_RS17805	0.23	-0.4
4,491,914	+		ABI39_RS17805	0.23	-0.2
4,491,915	-		ABI39_RS17805	0.23	+1.9
4,491,915	-		ABI39_RS17805	0.23	+1.8
4,491,918	-		ABI39_RS17805	0.24	+0.2
4,491,921	+		ABI39_RS17805	0.24	+1.3
4,492,085	+		ABI39_RS17805	0.36	+2.8
4,492,295	-		ABI39_RS17805	0.52	+0.1
4,492,502	+		ABI39_RS17805	0.67	-0.2
4,492,502	+		ABI39_RS17805	0.67	-0.5
4,492,504	+		ABI39_RS17805	0.67	+1.2
4,492,505	-		ABI39_RS17805	0.68	+0.0
4,492,569	-		ABI39_RS17805	0.72	-0.5
4,492,592	-		ABI39_RS17805	0.74	-0.6
4,492,656	+		ABI39_RS17805	0.79	+0.6
4,492,707	+		ABI39_RS17805	0.83	+1.2
4,492,874	-				+0.2
4,492,943	-				+0.6
4,492,944	+				+0.5
4,493,008	-				-1.5
4,493,010	-				-1.1
4,493,156	+		ABI39_RS17810	0.27	+1.0
4,493,157	-		ABI39_RS17810	0.27	-0.4
4,493,338	+		ABI39_RS17810	0.50	+0.9
4,493,340	-		ABI39_RS17810	0.50	-0.2
4,493,340	-		ABI39_RS17810	0.50	-1.0
4,493,387	+		ABI39_RS17810	0.56	-0.3
4,493,397	-		ABI39_RS17810	0.58	+1.5
4,493,399	+		ABI39_RS17810	0.58	+1.2
4,493,444	+		ABI39_RS17810	0.64	-0.6
4,493,501	+		ABI39_RS17810	0.71	+1.3
4,493,502	-		ABI39_RS17810	0.71	+0.1
4,493,669	+				+0.2
4,493,670	-				+0.3
4,493,677	+				-0.8
4,493,839	+		ABI39_RS17815	0.14	+1.0
4,493,839	+		ABI39_RS17815	0.14	+1.5
4,493,864	-		ABI39_RS17815	0.17	+0.1
4,493,882	-		ABI39_RS17815	0.20	+1.1
4,493,923	+		ABI39_RS17815	0.25	+0.4