Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS07640

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
2,067,738	+				-1.6
2,067,837	+		ABI39_RS07630	0.23	-0.7
2,067,837	+		ABI39_RS07630	0.23	-0.4
2,067,838	-		ABI39_RS07630	0.23	-1.4
2,067,903	-		ABI39_RS07630	0.35	+0.3
2,067,912	-		ABI39_RS07630	0.36	+1.3
2,068,009	-		ABI39_RS07630	0.54	-0.1
2,068,318	-				-1.6
2,068,334	-				-1.4
2,068,415	+				+1.0
2,068,415	+				+0.6
2,068,416	-				+0.9
2,068,427	+				+1.7
2,068,646	-				-0.9
2,068,672	+				-0.2
2,068,792	+				-1.0
2,069,230	+		ABI39_RS07640	0.43	+1.5
2,069,464	+		ABI39_RS07640	0.64	-0.5
2,069,480	-		ABI39_RS07640	0.65	+0.5
2,069,499	-		ABI39_RS07640	0.67	+0.9
2,069,760	-		ABI39_RS07640	0.90	-0.2
2,069,781	-				+0.5
2,069,782	+				-0.4
2,069,783	-				-0.8
2,069,793	-				-0.5
2,069,871	+				+0.6
2,069,872	-				+0.4
2,069,882	+				-0.5
2,069,883	-				-1.2
2,069,886	+				+1.1
2,069,886	+				-0.2
2,069,886	+				-0.4
2,069,886	+				+0.4
2,069,962	-				-0.4
2,070,013	-				+0.5
2,070,076	+		ABI39_RS07645	0.15	-0.1
2,070,077	-		ABI39_RS07645	0.15	-0.1
2,070,203	-		ABI39_RS07645	0.26	-0.7
2,070,430	+		ABI39_RS07645	0.46	-1.0
2,070,565	+		ABI39_RS07645	0.58	+0.2
2,070,584	-		ABI39_RS07645	0.60	-0.4
2,070,591	+		ABI39_RS07645	0.60	-0.0
2,070,592	-		ABI39_RS07645	0.60	+0.2
2,070,653	+		ABI39_RS07645	0.66	-1.5
2,070,687	-		ABI39_RS07645	0.69	+1.8
2,070,692	-		ABI39_RS07645	0.69	-0.9
2,070,692	-		ABI39_RS07645	0.69	+0.8
2,070,696	-		ABI39_RS07645	0.69	-0.2
2,070,736	+		ABI39_RS07645	0.73	-0.8
2,070,737	-		ABI39_RS07645	0.73	+0.0