Strain Fitness in Erwinia amylovora T8 around OLJFJH_09890

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-7
2,042,333	+		OLJFJH_09885	0.67	+5.0
2,042,334	-		OLJFJH_09885	0.67	+0.5
2,042,334	-		OLJFJH_09885	0.67	+0.3
2,042,334	-		OLJFJH_09885	0.67	+0.1
2,042,334	-		OLJFJH_09885	0.67	-0.4
2,042,334	-		OLJFJH_09885	0.67	+0.6
2,042,334	-		OLJFJH_09885	0.67	+0.1
2,042,423	+		OLJFJH_09885	0.71	+0.4
2,042,530	-		OLJFJH_09885	0.76	-0.2
2,042,530	-		OLJFJH_09885	0.76	+0.7
2,042,589	-		OLJFJH_09885	0.79	-0.8
2,042,639	+		OLJFJH_09885	0.82	-0.5
2,042,639	+		OLJFJH_09885	0.82	-0.8
2,042,640	-		OLJFJH_09885	0.82	+1.1
2,042,877	-				+0.5
2,042,945	+				+0.3
2,042,946	-				-0.3
2,043,016	-				+2.3
2,043,128	-				+0.3
2,043,128	-				-0.5
2,043,129	+				+0.7
2,043,130	-				+1.1
2,043,130	-				+0.1
2,043,162	+		OLJFJH_09890	0.12	+1.2
2,043,162	+		OLJFJH_09890	0.12	+0.3
2,043,163	-		OLJFJH_09890	0.12	+0.3
2,043,163	-		OLJFJH_09890	0.12	+0.1
2,043,164	+		OLJFJH_09890	0.12	-0.4
2,043,164	+		OLJFJH_09890	0.12	-1.8
2,043,337	-		OLJFJH_09890	0.27	+0.5
2,043,451	+		OLJFJH_09890	0.37	-1.1
2,043,532	-		OLJFJH_09890	0.44	+1.3
2,043,532	-		OLJFJH_09890	0.44	+5.9
2,043,578	-		OLJFJH_09890	0.48	-0.2
2,043,578	-		OLJFJH_09890	0.48	-0.5
2,043,671	-		OLJFJH_09890	0.56	-0.5
2,043,685	-		OLJFJH_09890	0.58	+0.7
2,044,172	-				+0.0
2,044,172	-				-0.1
2,044,314	-		OLJFJH_09895	0.20	+0.5
2,044,314	-		OLJFJH_09895	0.20	+0.8
2,044,324	+		OLJFJH_09895	0.21	-0.5
2,044,324	+		OLJFJH_09895	0.21	-0.3
2,044,586	+		OLJFJH_09895	0.63	-0.3
2,044,587	-		OLJFJH_09895	0.63	+0.5
2,044,654	+		OLJFJH_09895	0.73	+1.7
2,044,655	-		OLJFJH_09895	0.73	+1.4
2,044,655	-		OLJFJH_09895	0.73	+2.0
2,044,658	+		OLJFJH_09895	0.74	+1.3
2,044,747	+		OLJFJH_09895	0.88	+0.4
2,044,747	+		OLJFJH_09895	0.88	+2.3
2,044,810	+				-0.3
2,044,896	+		OLJFJH_09900	0.18	-1.7
2,044,896	+		OLJFJH_09900	0.18	-0.8
2,044,896	+		OLJFJH_09900	0.18	-0.5
2,044,898	+		OLJFJH_09900	0.18	+0.7
2,044,899	-		OLJFJH_09900	0.18	+0.6
2,044,899	-		OLJFJH_09900	0.18	-0.6
2,044,929	+		OLJFJH_09900	0.26	-0.9
2,045,118	+		OLJFJH_09900	0.76	+0.2