Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14865 and A4249_RS14870 are separated by 51 nucleotides A4249_RS14870 and A4249_RS14875 are separated by 14 nucleotides A4249_RS14875 and A4249_RS14880 are separated by 57 nucleotides A4249_RS14880 and A4249_RS14885 are separated by 101 nucleotides
A4249_RS14865: A4249_RS14865 - glutathione S-transferase N-terminal domain-containing protein, at 3,008,933 to 3,009,649
_RS14865
A4249_RS14870: A4249_RS14870 - DUF3597 family protein, at 3,009,701 to 3,010,087
_RS14870
A4249_RS14875: A4249_RS14875 - benzoate/H(+) symporter BenE family transporter, at 3,010,102 to 3,011,286
_RS14875
A4249_RS14880: A4249_RS14880 - enoyl-ACP reductase, at 3,011,344 to 3,012,141
_RS14880
A4249_RS14885: A4249_RS14885 - UTP--glucose-1-phosphate uridylyltransferase GalU, at 3,012,243 to 3,013,121
_RS14885
Position (kb)
3010
3011
3012 Strain fitness (log2 ratio)
-1
0
1 at 3009.218 kb on + strand, within A4249_RS14865 at 3009.218 kb on + strand, within A4249_RS14865 at 3009.218 kb on + strand, within A4249_RS14865 at 3009.218 kb on + strand, within A4249_RS14865 at 3009.218 kb on + strand, within A4249_RS14865 at 3009.219 kb on - strand, within A4249_RS14865 at 3009.219 kb on - strand, within A4249_RS14865 at 3009.219 kb on - strand, within A4249_RS14865 at 3009.219 kb on - strand, within A4249_RS14865 at 3009.219 kb on - strand, within A4249_RS14865 at 3009.269 kb on + strand, within A4249_RS14865 at 3009.362 kb on + strand, within A4249_RS14865 at 3009.362 kb on + strand, within A4249_RS14865 at 3009.363 kb on - strand, within A4249_RS14865 at 3009.363 kb on - strand, within A4249_RS14865 at 3009.363 kb on - strand, within A4249_RS14865 at 3009.363 kb on - strand, within A4249_RS14865 at 3009.389 kb on + strand, within A4249_RS14865 at 3009.389 kb on + strand, within A4249_RS14865 at 3009.389 kb on + strand, within A4249_RS14865 at 3009.390 kb on - strand, within A4249_RS14865 at 3009.479 kb on + strand, within A4249_RS14865 at 3009.479 kb on + strand, within A4249_RS14865 at 3009.480 kb on - strand, within A4249_RS14865 at 3009.480 kb on - strand, within A4249_RS14865 at 3009.480 kb on - strand, within A4249_RS14865 at 3009.480 kb on - strand, within A4249_RS14865 at 3009.480 kb on - strand, within A4249_RS14865 at 3009.533 kb on + strand, within A4249_RS14865 at 3009.627 kb on + strand at 3009.628 kb on - strand at 3009.628 kb on - strand at 3009.671 kb on + strand at 3009.672 kb on - strand at 3009.700 kb on + strand at 3009.700 kb on + strand at 3009.700 kb on + strand at 3009.701 kb on - strand at 3009.701 kb on - strand at 3009.701 kb on - strand at 3009.701 kb on - strand at 3009.706 kb on + strand at 3009.706 kb on + strand at 3009.707 kb on - strand at 3009.916 kb on + strand, within A4249_RS14870 at 3009.916 kb on + strand, within A4249_RS14870 at 3009.916 kb on + strand, within A4249_RS14870 at 3009.916 kb on + strand, within A4249_RS14870 at 3009.916 kb on + strand, within A4249_RS14870 at 3009.917 kb on - strand, within A4249_RS14870 at 3009.917 kb on - strand, within A4249_RS14870 at 3009.917 kb on - strand, within A4249_RS14870 at 3009.917 kb on - strand, within A4249_RS14870 at 3009.917 kb on - strand, within A4249_RS14870 at 3009.917 kb on - strand, within A4249_RS14870 at 3009.917 kb on - strand, within A4249_RS14870 at 3010.085 kb on + strand at 3010.379 kb on + strand, within A4249_RS14875 at 3010.379 kb on + strand, within A4249_RS14875 at 3010.380 kb on - strand, within A4249_RS14875 at 3010.380 kb on - strand, within A4249_RS14875 at 3010.391 kb on + strand, within A4249_RS14875 at 3010.391 kb on + strand, within A4249_RS14875 at 3010.392 kb on - strand, within A4249_RS14875 at 3011.297 kb on + strand at 3011.351 kb on - strand at 3012.244 kb on + strand at 3012.244 kb on + strand at 3012.245 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 3,009,218 + A4249_RS14865 0.40 +0.0 3,009,218 + A4249_RS14865 0.40 -0.2 3,009,218 + A4249_RS14865 0.40 -0.0 3,009,218 + A4249_RS14865 0.40 -0.1 3,009,218 + A4249_RS14865 0.40 -0.7 3,009,219 - A4249_RS14865 0.40 -0.8 3,009,219 - A4249_RS14865 0.40 -0.2 3,009,219 - A4249_RS14865 0.40 +0.5 3,009,219 - A4249_RS14865 0.40 +0.0 3,009,219 - A4249_RS14865 0.40 -1.3 3,009,269 + A4249_RS14865 0.47 -0.6 3,009,362 + A4249_RS14865 0.60 -0.9 3,009,362 + A4249_RS14865 0.60 +0.6 3,009,363 - A4249_RS14865 0.60 +0.3 3,009,363 - A4249_RS14865 0.60 -0.8 3,009,363 - A4249_RS14865 0.60 -0.9 3,009,363 - A4249_RS14865 0.60 -0.3 3,009,389 + A4249_RS14865 0.64 -0.7 3,009,389 + A4249_RS14865 0.64 +0.1 3,009,389 + A4249_RS14865 0.64 -0.6 3,009,390 - A4249_RS14865 0.64 +0.3 3,009,479 + A4249_RS14865 0.76 +0.3 3,009,479 + A4249_RS14865 0.76 -0.2 3,009,480 - A4249_RS14865 0.76 -0.2 3,009,480 - A4249_RS14865 0.76 -1.7 3,009,480 - A4249_RS14865 0.76 -0.6 3,009,480 - A4249_RS14865 0.76 -0.7 3,009,480 - A4249_RS14865 0.76 +0.1 3,009,533 + A4249_RS14865 0.84 -0.7 3,009,627 + -0.8 3,009,628 - +0.2 3,009,628 - -0.1 3,009,671 + -1.0 3,009,672 - +0.8 3,009,700 + +1.0 3,009,700 + -0.5 3,009,700 + +1.0 3,009,701 - +0.1 3,009,701 - -0.0 3,009,701 - +0.3 3,009,701 - +0.6 3,009,706 + -0.1 3,009,706 + +0.7 3,009,707 - -0.2 3,009,916 + A4249_RS14870 0.56 -0.5 3,009,916 + A4249_RS14870 0.56 -0.6 3,009,916 + A4249_RS14870 0.56 -0.1 3,009,916 + A4249_RS14870 0.56 +0.9 3,009,916 + A4249_RS14870 0.56 +1.1 3,009,917 - A4249_RS14870 0.56 +0.5 3,009,917 - A4249_RS14870 0.56 +0.1 3,009,917 - A4249_RS14870 0.56 -1.0 3,009,917 - A4249_RS14870 0.56 -0.5 3,009,917 - A4249_RS14870 0.56 +0.6 3,009,917 - A4249_RS14870 0.56 +0.7 3,009,917 - A4249_RS14870 0.56 -0.3 3,010,085 + +0.3 3,010,379 + A4249_RS14875 0.23 +0.4 3,010,379 + A4249_RS14875 0.23 -0.8 3,010,380 - A4249_RS14875 0.23 -0.2 3,010,380 - A4249_RS14875 0.23 -0.4 3,010,391 + A4249_RS14875 0.24 -1.0 3,010,391 + A4249_RS14875 0.24 +0.1 3,010,392 - A4249_RS14875 0.24 -1.1 3,011,297 + -1.0 3,011,351 - -0.6 3,012,244 + +0.0 3,012,244 + -0.2 3,012,245 - +0.1
Or see this region's nucleotide sequence