Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14110

Experiment: Thymine 0.793 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14105 and A4249_RS14110 are separated by 744 nucleotides A4249_RS14105: A4249_RS14105 - hypothetical protein, at 2,846,036 to 2,846,266 _RS14105 A4249_RS14110: A4249_RS14110 - type II toxin-antitoxin system RelE/ParE family toxin, at 2,847,011 to 2,847,313 _RS14110 Position (kb) 2847 2848Strain fitness (log2 ratio) -2 -1 0 1at 2846.019 kb on + strandat 2846.200 kb on + strand, within A4249_RS14105at 2846.201 kb on - strand, within A4249_RS14105at 2846.201 kb on - strand, within A4249_RS14105at 2846.201 kb on - strand, within A4249_RS14105at 2846.201 kb on - strand, within A4249_RS14105at 2846.264 kb on + strandat 2846.264 kb on + strandat 2846.264 kb on + strandat 2846.265 kb on - strandat 2846.265 kb on - strandat 2846.286 kb on + strandat 2846.287 kb on - strandat 2846.298 kb on + strandat 2846.299 kb on - strandat 2846.299 kb on - strandat 2846.299 kb on - strandat 2846.469 kb on + strandat 2846.469 kb on + strandat 2846.469 kb on + strandat 2846.469 kb on + strandat 2846.470 kb on - strandat 2846.470 kb on - strandat 2846.470 kb on - strandat 2846.470 kb on - strandat 2846.470 kb on - strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.513 kb on + strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.514 kb on - strandat 2846.575 kb on + strandat 2846.576 kb on - strandat 2846.576 kb on - strandat 2846.576 kb on - strandat 2846.576 kb on - strandat 2846.576 kb on - strandat 2846.576 kb on - strandat 2846.577 kb on + strandat 2846.577 kb on + strandat 2846.577 kb on + strandat 2846.578 kb on - strandat 2846.578 kb on - strandat 2846.697 kb on + strandat 2846.697 kb on + strandat 2846.741 kb on + strandat 2846.819 kb on + strandat 2846.861 kb on + strandat 2846.907 kb on + strandat 2846.912 kb on - strandat 2846.943 kb on + strandat 2846.947 kb on + strandat 2846.947 kb on + strandat 2846.947 kb on + strandat 2846.947 kb on + strandat 2846.947 kb on + strandat 2846.948 kb on - strandat 2846.948 kb on - strandat 2846.948 kb on - strandat 2846.956 kb on + strandat 2846.971 kb on + strandat 2846.971 kb on + strandat 2846.971 kb on + strandat 2846.972 kb on - strandat 2846.972 kb on - strandat 2846.972 kb on - strandat 2846.974 kb on + strandat 2846.975 kb on - strandat 2846.981 kb on + strandat 2846.982 kb on - strandat 2847.069 kb on + strand, within A4249_RS14110at 2847.070 kb on + strand, within A4249_RS14110at 2847.070 kb on + strand, within A4249_RS14110at 2847.070 kb on + strand, within A4249_RS14110at 2847.070 kb on + strand, within A4249_RS14110at 2847.070 kb on + strand, within A4249_RS14110at 2847.071 kb on - strand, within A4249_RS14110at 2847.071 kb on - strand, within A4249_RS14110at 2847.071 kb on - strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.083 kb on + strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.084 kb on - strand, within A4249_RS14110at 2847.085 kb on - strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.086 kb on + strand, within A4249_RS14110at 2847.087 kb on - strand, within A4249_RS14110at 2847.087 kb on - strand, within A4249_RS14110at 2847.087 kb on - strand, within A4249_RS14110at 2847.087 kb on - strand, within A4249_RS14110at 2847.087 kb on - strand, within A4249_RS14110at 2847.087 kb on - strand, within A4249_RS14110at 2847.232 kb on + strand, within A4249_RS14110at 2847.286 kb on + strandat 2847.286 kb on + strandat 2847.287 kb on - strandat 2847.311 kb on + strandat 2847.311 kb on + strandat 2847.312 kb on - strandat 2847.312 kb on - strandat 2847.312 kb on - strandat 2847.312 kb on - strandat 2847.318 kb on + strandat 2847.318 kb on + strandat 2847.318 kb on + strandat 2847.318 kb on + strandat 2847.319 kb on - strandat 2847.319 kb on - strandat 2847.319 kb on - strandat 2847.319 kb on - strandat 2847.370 kb on + strandat 2847.371 kb on - strandat 2847.531 kb on - strandat 2847.531 kb on - strandat 2847.602 kb on - strandat 2847.632 kb on - strandat 2847.632 kb on - strandat 2847.632 kb on - strandat 2847.632 kb on - strandat 2847.632 kb on - strandat 2847.632 kb on - strandat 2847.632 kb on - strandat 2847.632 kb on - strandat 2847.632 kb on - strandat 2847.632 kb on - strandat 2847.632 kb on - strandat 2847.632 kb on - strandat 2847.635 kb on - strandat 2847.635 kb on - strandat 2847.635 kb on - strandat 2847.685 kb on - strandat 2847.687 kb on - strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.715 kb on + strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.716 kb on - strandat 2847.719 kb on + strandat 2847.719 kb on + strandat 2847.719 kb on + strandat 2847.720 kb on - strandat 2847.720 kb on - strandat 2847.720 kb on - strandat 2847.720 kb on - strandat 2847.720 kb on - strandat 2847.720 kb on - strandat 2847.720 kb on - strandat 2847.720 kb on - strandat 2847.850 kb on + strandat 2847.850 kb on + strandat 2847.850 kb on + strandat 2847.850 kb on + strandat 2847.850 kb on + strandat 2847.850 kb on + strandat 2847.850 kb on + strandat 2847.851 kb on - strandat 2847.851 kb on - strandat 2847.851 kb on - strandat 2847.851 kb on - strandat 2847.851 kb on - strandat 2847.851 kb on - strandat 2847.951 kb on + strandat 2847.952 kb on - strandat 2848.050 kb on + strandat 2848.050 kb on + strandat 2848.050 kb on + strandat 2848.051 kb on - strandat 2848.051 kb on - strandat 2848.051 kb on - strandat 2848.051 kb on - strandat 2848.051 kb on - strandat 2848.054 kb on + strandat 2848.054 kb on + strandat 2848.054 kb on + strandat 2848.054 kb on + strandat 2848.054 kb on + strandat 2848.054 kb on + strandat 2848.055 kb on - strandat 2848.055 kb on - strandat 2848.055 kb on - strandat 2848.055 kb on - strandat 2848.055 kb on - strandat 2848.055 kb on - strandat 2848.055 kb on - strandat 2848.055 kb on - strandat 2848.055 kb on - strandat 2848.055 kb on - strandat 2848.055 kb on - strandat 2848.065 kb on + strandat 2848.065 kb on + strandat 2848.065 kb on + strandat 2848.065 kb on + strandat 2848.066 kb on - strandat 2848.066 kb on - strandat 2848.066 kb on - strandat 2848.066 kb on - strandat 2848.145 kb on - strandat 2848.145 kb on - strandat 2848.145 kb on - strandat 2848.153 kb on + strandat 2848.154 kb on - strandat 2848.154 kb on - strandat 2848.157 kb on + strandat 2848.157 kb on + strandat 2848.157 kb on + strandat 2848.158 kb on - strandat 2848.158 kb on - strandat 2848.158 kb on - strandat 2848.158 kb on - strandat 2848.158 kb on - strandat 2848.158 kb on - strandat 2848.161 kb on + strandat 2848.161 kb on + strandat 2848.162 kb on - strandat 2848.162 kb on - strandat 2848.218 kb on + strandat 2848.218 kb on + strandat 2848.264 kb on + strandat 2848.265 kb on - strandat 2848.265 kb on - strandat 2848.265 kb on - strandat 2848.265 kb on - strandat 2848.265 kb on - strandat 2848.292 kb on + strandat 2848.292 kb on + strandat 2848.292 kb on + strandat 2848.292 kb on + strandat 2848.292 kb on + strandat 2848.292 kb on + strandat 2848.292 kb on + strandat 2848.292 kb on + strandat 2848.292 kb on + strandat 2848.293 kb on - strandat 2848.293 kb on - strandat 2848.293 kb on - strandat 2848.293 kb on - strandat 2848.293 kb on - strandat 2848.293 kb on - strandat 2848.293 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C)
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2,846,019 + -0.1
2,846,200 + A4249_RS14105 0.71 +1.1
2,846,201 - A4249_RS14105 0.71 +0.0
2,846,201 - A4249_RS14105 0.71 -0.5
2,846,201 - A4249_RS14105 0.71 +0.2
2,846,201 - A4249_RS14105 0.71 +0.7
2,846,264 + +0.7
2,846,264 + -0.2
2,846,264 + +0.2
2,846,265 - +0.3
2,846,265 - -0.0
2,846,286 + -0.1
2,846,287 - +0.9
2,846,298 + -0.2
2,846,299 - +0.5
2,846,299 - +0.3
2,846,299 - +0.5
2,846,469 + +0.5
2,846,469 + +0.2
2,846,469 + +0.2
2,846,469 + +0.5
2,846,470 - -0.1
2,846,470 - -1.1
2,846,470 - -0.2
2,846,470 - +0.8
2,846,470 - +0.2
2,846,513 + +0.2
2,846,513 + +0.0
2,846,513 + +0.4
2,846,513 + +1.3
2,846,513 + +0.0
2,846,513 + +0.3
2,846,513 + -0.0
2,846,513 + +0.2
2,846,513 + +0.9
2,846,513 + +0.9
2,846,513 + +0.6
2,846,514 - +0.3
2,846,514 - -2.3
2,846,514 - +0.1
2,846,514 - +0.8
2,846,514 - +0.2
2,846,514 - -0.0
2,846,514 - -1.2
2,846,514 - -0.2
2,846,575 + +0.1
2,846,576 - +0.3
2,846,576 - +0.7
2,846,576 - -0.9
2,846,576 - -0.3
2,846,576 - +0.2
2,846,576 - +0.2
2,846,577 + +0.5
2,846,577 + -0.1
2,846,577 + -0.9
2,846,578 - +0.6
2,846,578 - -0.3
2,846,697 + -1.0
2,846,697 + -0.2
2,846,741 + +0.3
2,846,819 + -0.2
2,846,861 + -0.7
2,846,907 + +0.3
2,846,912 - +0.4
2,846,943 + +0.3
2,846,947 + +0.1
2,846,947 + +1.3
2,846,947 + -0.1
2,846,947 + +0.3
2,846,947 + -0.1
2,846,948 - -0.2
2,846,948 - -0.7
2,846,948 - +0.5
2,846,956 + +1.5
2,846,971 + -1.3
2,846,971 + +0.3
2,846,971 + -0.1
2,846,972 - -0.1
2,846,972 - +0.2
2,846,972 - -0.3
2,846,974 + +0.2
2,846,975 - +0.1
2,846,981 + -0.3
2,846,982 - +0.0
2,847,069 + A4249_RS14110 0.19 -0.1
2,847,070 + A4249_RS14110 0.19 -0.1
2,847,070 + A4249_RS14110 0.19 -0.6
2,847,070 + A4249_RS14110 0.19 -1.3
2,847,070 + A4249_RS14110 0.19 -0.3
2,847,070 + A4249_RS14110 0.19 -0.3
2,847,071 - A4249_RS14110 0.20 -0.7
2,847,071 - A4249_RS14110 0.20 +0.1
2,847,071 - A4249_RS14110 0.20 +0.7
2,847,083 + A4249_RS14110 0.24 +0.4
2,847,083 + A4249_RS14110 0.24 -0.3
2,847,083 + A4249_RS14110 0.24 +0.7
2,847,083 + A4249_RS14110 0.24 +1.0
2,847,083 + A4249_RS14110 0.24 -0.4
2,847,083 + A4249_RS14110 0.24 -0.2
2,847,083 + A4249_RS14110 0.24 -0.1
2,847,083 + A4249_RS14110 0.24 +0.2
2,847,083 + A4249_RS14110 0.24 -0.2
2,847,084 - A4249_RS14110 0.24 -0.2
2,847,084 - A4249_RS14110 0.24 +0.3
2,847,084 - A4249_RS14110 0.24 +0.2
2,847,084 - A4249_RS14110 0.24 -0.5
2,847,084 - A4249_RS14110 0.24 -0.2
2,847,084 - A4249_RS14110 0.24 -0.5
2,847,084 - A4249_RS14110 0.24 -0.9
2,847,084 - A4249_RS14110 0.24 -0.1
2,847,084 - A4249_RS14110 0.24 -0.1
2,847,085 - A4249_RS14110 0.24 -0.0
2,847,086 + A4249_RS14110 0.25 -0.2
2,847,086 + A4249_RS14110 0.25 -0.2
2,847,086 + A4249_RS14110 0.25 -0.6
2,847,086 + A4249_RS14110 0.25 -0.1
2,847,086 + A4249_RS14110 0.25 -0.5
2,847,086 + A4249_RS14110 0.25 +0.1
2,847,086 + A4249_RS14110 0.25 +0.4
2,847,086 + A4249_RS14110 0.25 +1.5
2,847,087 - A4249_RS14110 0.25 +1.0
2,847,087 - A4249_RS14110 0.25 -0.1
2,847,087 - A4249_RS14110 0.25 +0.4
2,847,087 - A4249_RS14110 0.25 -0.2
2,847,087 - A4249_RS14110 0.25 +0.3
2,847,087 - A4249_RS14110 0.25 +0.1
2,847,232 + A4249_RS14110 0.73 -1.3
2,847,286 + +0.5
2,847,286 + +0.2
2,847,287 - +1.0
2,847,311 + -0.0
2,847,311 + +0.2
2,847,312 - +0.6
2,847,312 - -0.3
2,847,312 - -0.5
2,847,312 - +0.2
2,847,318 + -0.6
2,847,318 + +0.1
2,847,318 + +0.0
2,847,318 + +0.2
2,847,319 - -0.7
2,847,319 - -0.7
2,847,319 - -0.3
2,847,319 - +0.2
2,847,370 + -2.5
2,847,371 - -0.2
2,847,531 - -1.0
2,847,531 - +0.3
2,847,602 - -1.8
2,847,632 - +0.4
2,847,632 - +0.2
2,847,632 - -0.2
2,847,632 - +0.9
2,847,632 - -0.7
2,847,632 - +0.4
2,847,632 - +0.2
2,847,632 - +0.2
2,847,632 - +0.2
2,847,632 - -0.1
2,847,632 - +0.2
2,847,632 - -0.0
2,847,635 - -1.6
2,847,635 - +0.4
2,847,635 - -0.7
2,847,685 - -0.7
2,847,687 - +0.4
2,847,715 + +0.6
2,847,715 + -0.2
2,847,715 + +0.1
2,847,715 + -0.4
2,847,715 + +1.4
2,847,715 + +0.3
2,847,715 + -1.1
2,847,715 + -0.4
2,847,715 + -0.9
2,847,715 + -0.2
2,847,715 + -0.6
2,847,715 + +0.9
2,847,715 + -0.3
2,847,715 + -0.1
2,847,715 + -0.4
2,847,715 + -0.3
2,847,715 + -0.4
2,847,715 + -1.0
2,847,715 + +0.2
2,847,715 + +0.2
2,847,716 - -0.0
2,847,716 - -0.4
2,847,716 - +0.2
2,847,716 - -0.7
2,847,716 - +0.2
2,847,716 - +0.6
2,847,716 - -0.2
2,847,716 - +0.1
2,847,716 - +0.1
2,847,716 - +0.3
2,847,716 - +0.5
2,847,716 - -0.7
2,847,716 - +0.2
2,847,716 - -0.7
2,847,716 - -1.2
2,847,716 - -0.2
2,847,716 - -1.5
2,847,719 + +0.0
2,847,719 + +0.0
2,847,719 + +1.2
2,847,720 - +0.6
2,847,720 - +0.5
2,847,720 - -0.2
2,847,720 - +0.9
2,847,720 - +0.2
2,847,720 - -0.8
2,847,720 - -0.0
2,847,720 - +0.5
2,847,850 + +0.0
2,847,850 + +0.6
2,847,850 + -0.6
2,847,850 + -0.7
2,847,850 + +0.2
2,847,850 + +0.1
2,847,850 + +0.3
2,847,851 - +0.4
2,847,851 - -0.3
2,847,851 - -0.1
2,847,851 - +0.8
2,847,851 - -0.0
2,847,851 - +0.9
2,847,951 + +0.9
2,847,952 - -0.4
2,848,050 + -0.2
2,848,050 + -0.3
2,848,050 + -1.1
2,848,051 - -0.1
2,848,051 - -0.5
2,848,051 - +0.8
2,848,051 - -0.2
2,848,051 - +0.0
2,848,054 + -0.3
2,848,054 + -1.2
2,848,054 + +0.3
2,848,054 + +0.6
2,848,054 + -0.1
2,848,054 + -1.3
2,848,055 - +0.7
2,848,055 - +0.3
2,848,055 - +0.7
2,848,055 - -0.7
2,848,055 - +0.3
2,848,055 - -0.1
2,848,055 - -0.2
2,848,055 - -0.6
2,848,055 - -0.4
2,848,055 - -0.7
2,848,055 - +0.2
2,848,065 + -0.8
2,848,065 + +1.0
2,848,065 + +0.8
2,848,065 + -0.5
2,848,066 - -2.7
2,848,066 - +1.0
2,848,066 - -0.4
2,848,066 - -0.6
2,848,145 - +0.2
2,848,145 - +0.2
2,848,145 - +0.2
2,848,153 + +0.1
2,848,154 - +0.7
2,848,154 - +0.4
2,848,157 + +0.0
2,848,157 + +0.3
2,848,157 + -0.2
2,848,158 - +0.3
2,848,158 - +0.2
2,848,158 - +0.2
2,848,158 - -0.2
2,848,158 - +0.4
2,848,158 - -0.1
2,848,161 + +0.1
2,848,161 + -1.3
2,848,162 - -0.7
2,848,162 - -0.2
2,848,218 + +0.6
2,848,218 + +0.2
2,848,264 + -0.3
2,848,265 - +0.8
2,848,265 - +0.6
2,848,265 - -0.5
2,848,265 - +0.8
2,848,265 - +0.3
2,848,292 + -0.0
2,848,292 + +0.0
2,848,292 + -1.0
2,848,292 + +0.4
2,848,292 + +0.3
2,848,292 + -1.3
2,848,292 + +0.8
2,848,292 + -1.2
2,848,292 + -0.4
2,848,293 - -0.0
2,848,293 - +0.2
2,848,293 - +0.4
2,848,293 - +0.1
2,848,293 - +0.6
2,848,293 - +0.0
2,848,293 - +1.3

Or see this region's nucleotide sequence