Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12730

Experiment: Thymine 0.793 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS12720 and A4249_RS12725 are separated by 16 nucleotidesA4249_RS12725 and A4249_RS12730 are separated by 32 nucleotidesA4249_RS12730 and A4249_RS12735 are separated by 72 nucleotidesA4249_RS12735 and A4249_RS12740 are separated by 344 nucleotides A4249_RS12720: A4249_RS12720 - F0F1 ATP synthase subunit beta, at 2,550,965 to 2,552,521 _RS12720 A4249_RS12725: A4249_RS12725 - F0F1 ATP synthase subunit gamma, at 2,552,538 to 2,553,416 _RS12725 A4249_RS12730: A4249_RS12730 - F0F1 ATP synthase subunit alpha, at 2,553,449 to 2,554,981 _RS12730 A4249_RS12735: A4249_RS12735 - F0F1 ATP synthase subunit delta, at 2,555,054 to 2,555,608 _RS12735 A4249_RS12740: A4249_RS12740 - TerC family protein, at 2,555,953 to 2,556,780 _RS12740 Position (kb) 2553 2554 2555Strain fitness (log2 ratio) -2 -1 0 1at 2555.686 kb on - strandat 2555.912 kb on - strandat 2555.966 kb on + strandat 2555.967 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C)
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2,555,686 - +0.4
2,555,912 - +0.1
2,555,966 + -1.8
2,555,967 - +0.3

Or see this region's nucleotide sequence