Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12660

Experiment: Thymine 0.793 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymine 0.793 mM (C)
2,539,036	-		A4249_RS12655	0.15	+0.1
2,539,188	+		A4249_RS12655	0.31	+0.9
2,539,188	+		A4249_RS12655	0.31	+0.5
2,539,188	+		A4249_RS12655	0.31	-0.4
2,539,189	-		A4249_RS12655	0.31	-0.7
2,539,189	-		A4249_RS12655	0.31	-0.3
2,539,189	-		A4249_RS12655	0.31	+0.3
2,539,189	-		A4249_RS12655	0.31	+1.4
2,539,189	-		A4249_RS12655	0.31	-0.4
2,539,189	-		A4249_RS12655	0.31	-0.0
2,539,314	+		A4249_RS12655	0.44	+0.5
2,539,314	+		A4249_RS12655	0.44	-0.1
2,539,315	-		A4249_RS12655	0.44	-0.5
2,539,315	-		A4249_RS12655	0.44	+0.9
2,539,320	+		A4249_RS12655	0.44	-0.3
2,539,320	+		A4249_RS12655	0.44	+0.2
2,539,320	+		A4249_RS12655	0.44	+0.6
2,539,321	-		A4249_RS12655	0.44	+0.1
2,539,321	-		A4249_RS12655	0.44	+0.2
2,539,321	-		A4249_RS12655	0.44	-0.2
2,539,321	-		A4249_RS12655	0.44	+0.0
2,539,398	+		A4249_RS12655	0.52	-0.5
2,539,398	+		A4249_RS12655	0.52	-0.7
2,539,398	+		A4249_RS12655	0.52	-0.3
2,539,398	+		A4249_RS12655	0.52	-0.9
2,539,399	-		A4249_RS12655	0.52	-0.0
2,539,399	-		A4249_RS12655	0.52	-0.6
2,539,399	-		A4249_RS12655	0.52	-0.7
2,539,399	-		A4249_RS12655	0.52	+0.2
2,539,399	-		A4249_RS12655	0.52	+0.3
2,539,399	-		A4249_RS12655	0.52	+0.7
2,539,399	-		A4249_RS12655	0.52	+0.0
2,539,399	-		A4249_RS12655	0.52	+0.2
2,539,638	+		A4249_RS12655	0.77	+0.5
2,539,638	+		A4249_RS12655	0.77	-1.2
2,539,639	-		A4249_RS12655	0.77	-0.4
2,539,639	-		A4249_RS12655	0.77	+0.6
2,539,675	-		A4249_RS12655	0.81	+1.1
2,539,675	-		A4249_RS12655	0.81	+0.4
2,539,704	+		A4249_RS12655	0.84	-0.2
2,539,704	+		A4249_RS12655	0.84	-0.2
2,539,704	+		A4249_RS12655	0.84	-0.4
2,539,705	-		A4249_RS12655	0.84	+0.3
2,539,705	-		A4249_RS12655	0.84	-0.1
2,539,705	-		A4249_RS12655	0.84	-0.7
2,539,846	+				-0.2
2,539,846	+				-0.4
2,539,846	+				-0.2
2,539,847	-				+1.4
2,539,847	-				-0.2
2,539,847	-				-0.1
2,539,939	-				-0.5
2,540,068	+		A4249_RS12660	0.19	-0.8
2,540,069	-		A4249_RS12660	0.19	-1.1
2,540,233	+		A4249_RS12660	0.39	-0.1
2,540,233	+		A4249_RS12660	0.39	+1.0
2,540,233	+		A4249_RS12660	0.39	+0.2
2,540,233	+		A4249_RS12660	0.39	+0.6
2,540,233	+		A4249_RS12660	0.39	-0.1
2,540,234	-		A4249_RS12660	0.39	+0.1
2,540,234	-		A4249_RS12660	0.39	+0.0
2,540,234	-		A4249_RS12660	0.39	-0.3
2,540,234	-		A4249_RS12660	0.39	-0.6
2,540,234	-		A4249_RS12660	0.39	-1.1
2,540,234	-		A4249_RS12660	0.39	-0.2
2,540,234	-		A4249_RS12660	0.39	-0.7
2,540,237	+		A4249_RS12660	0.39	+0.3
2,540,237	+		A4249_RS12660	0.39	-0.4
2,540,237	+		A4249_RS12660	0.39	+0.0
2,540,238	-		A4249_RS12660	0.39	-0.5
2,540,238	-		A4249_RS12660	0.39	-0.1
2,540,258	+		A4249_RS12660	0.42	+0.6
2,540,258	+		A4249_RS12660	0.42	-0.1
2,540,258	+		A4249_RS12660	0.42	-0.8
2,540,258	+		A4249_RS12660	0.42	-0.3
2,540,259	-		A4249_RS12660	0.42	+0.4
2,540,259	-		A4249_RS12660	0.42	-0.7
2,540,259	-		A4249_RS12660	0.42	-1.2
2,540,259	-		A4249_RS12660	0.42	-1.2
2,540,264	+		A4249_RS12660	0.42	-0.7
2,540,264	+		A4249_RS12660	0.42	-1.1
2,540,264	+		A4249_RS12660	0.42	+0.2
2,540,264	+		A4249_RS12660	0.42	+0.5
2,540,264	+		A4249_RS12660	0.42	+0.8
2,540,264	+		A4249_RS12660	0.42	+0.7
2,540,264	+		A4249_RS12660	0.42	-0.9
2,540,264	+		A4249_RS12660	0.42	-0.7
2,540,265	-		A4249_RS12660	0.43	+0.9
2,540,265	-		A4249_RS12660	0.43	+0.5
2,540,407	+		A4249_RS12660	0.59	-0.6
2,540,407	+		A4249_RS12660	0.59	+0.4
2,540,407	+		A4249_RS12660	0.59	-1.1
2,540,407	+		A4249_RS12660	0.59	-0.7
2,540,407	+		A4249_RS12660	0.59	-0.6
2,540,408	-		A4249_RS12660	0.60	+0.3
2,540,482	+		A4249_RS12660	0.68	-1.3
2,540,483	-		A4249_RS12660	0.69	-1.6
2,540,483	-		A4249_RS12660	0.69	-0.8
2,540,483	-		A4249_RS12660	0.69	-0.5
2,540,743	+				+0.9
2,540,743	+				+1.0
2,540,744	-				-0.2
2,540,972	+		A4249_RS12665	0.58	-0.2
2,540,972	+		A4249_RS12665	0.58	-0.1
2,540,972	+		A4249_RS12665	0.58	+0.1
2,540,972	+		A4249_RS12665	0.58	-0.5
2,540,972	+		A4249_RS12665	0.58	+0.1
2,540,972	+		A4249_RS12665	0.58	-0.1
2,540,973	-		A4249_RS12665	0.58	+0.3
2,540,973	-		A4249_RS12665	0.58	+0.4
2,540,973	-		A4249_RS12665	0.58	-1.0
2,540,973	-		A4249_RS12665	0.58	-0.2
2,540,973	-		A4249_RS12665	0.58	-0.3
2,541,153	+				-0.6
2,541,154	-				+1.3
2,541,154	-				-0.5
2,541,176	+				-0.1
2,541,176	+				+0.1
2,541,177	-				+0.3
2,541,177	-				-0.4
2,541,177	-				-1.2
2,541,336	-		A4249_RS12670	0.22	-0.9
2,541,366	+		A4249_RS12670	0.25	+0.3
2,541,367	-		A4249_RS12670	0.25	-0.2
2,541,421	+		A4249_RS12670	0.31	-0.1
2,541,428	-		A4249_RS12670	0.32	+0.1
2,541,490	+		A4249_RS12670	0.39	-0.0
2,541,491	-		A4249_RS12670	0.39	-0.3
2,541,491	-		A4249_RS12670	0.39	-0.4
2,541,523	+		A4249_RS12670	0.42	-0.8
2,541,523	+		A4249_RS12670	0.42	-0.5
2,541,523	+		A4249_RS12670	0.42	-0.6
2,541,523	+		A4249_RS12670	0.42	+0.5
2,541,524	-		A4249_RS12670	0.43	+0.0
2,541,524	-		A4249_RS12670	0.43	+0.1
2,541,524	-		A4249_RS12670	0.43	-0.4
2,541,524	-		A4249_RS12670	0.43	+0.4
2,541,611	+		A4249_RS12670	0.52	+0.6
2,541,611	+		A4249_RS12670	0.52	+0.6
2,541,612	-		A4249_RS12670	0.52	-0.2
2,541,612	-		A4249_RS12670	0.52	+0.4
2,541,612	-		A4249_RS12670	0.52	-0.7
2,541,709	-		A4249_RS12670	0.63	-2.1
2,541,709	-		A4249_RS12670	0.63	-0.2
2,541,717	+		A4249_RS12670	0.64	-1.1
2,541,717	+		A4249_RS12670	0.64	+0.1
2,541,717	+		A4249_RS12670	0.64	+0.0
2,541,717	+		A4249_RS12670	0.64	-0.8
2,541,717	+		A4249_RS12670	0.64	+0.7
2,541,717	+		A4249_RS12670	0.64	+0.2
2,541,718	-		A4249_RS12670	0.64	+0.3
2,541,718	-		A4249_RS12670	0.64	+0.0
2,541,718	-		A4249_RS12670	0.64	+0.1
2,541,718	-		A4249_RS12670	0.64	-0.1