Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09995

Experiment: Thymine 0.793 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymine 0.793 mM (C)
2,005,192	-		A4249_RS09990	0.50	+0.9
2,005,199	-		A4249_RS09990	0.50	+0.3
2,005,335	+		A4249_RS09990	0.61	-0.6
2,005,335	+		A4249_RS09990	0.61	-0.5
2,005,335	+		A4249_RS09990	0.61	-0.8
2,005,335	+		A4249_RS09990	0.61	+0.6
2,005,335	+		A4249_RS09990	0.61	-0.2
2,005,336	-		A4249_RS09990	0.61	+0.8
2,005,336	-		A4249_RS09990	0.61	+0.5
2,005,336	-		A4249_RS09990	0.61	-0.1
2,005,336	-		A4249_RS09990	0.61	-0.6
2,005,336	-		A4249_RS09990	0.61	-0.4
2,005,336	-		A4249_RS09990	0.61	+0.0
2,005,336	-		A4249_RS09990	0.61	+0.1
2,005,380	+		A4249_RS09990	0.64	-0.1
2,005,380	+		A4249_RS09990	0.64	+0.1
2,005,380	+		A4249_RS09990	0.64	-1.0
2,005,381	-		A4249_RS09990	0.65	-0.4
2,005,381	-		A4249_RS09990	0.65	-1.1
2,005,587	+		A4249_RS09990	0.81	-0.0
2,005,587	+		A4249_RS09990	0.81	-0.1
2,005,587	+		A4249_RS09990	0.81	+0.3
2,005,645	+		A4249_RS09990	0.85	+0.1
2,005,645	+		A4249_RS09990	0.85	+0.4
2,005,645	+		A4249_RS09990	0.85	-0.5
2,005,645	+		A4249_RS09990	0.85	-0.1
2,005,645	+		A4249_RS09990	0.85	-0.6
2,005,646	-		A4249_RS09990	0.85	+0.5
2,005,652	+		A4249_RS09990	0.86	-0.4
2,005,652	+		A4249_RS09990	0.86	-1.0
2,005,652	+		A4249_RS09990	0.86	-1.4
2,005,652	+		A4249_RS09990	0.86	-0.3
2,005,653	-		A4249_RS09990	0.86	+1.0
2,005,653	-		A4249_RS09990	0.86	+0.0
2,005,653	-		A4249_RS09990	0.86	+0.9
2,005,653	-		A4249_RS09990	0.86	-1.5
2,005,653	-		A4249_RS09990	0.86	-0.5
2,005,653	-		A4249_RS09990	0.86	-0.3
2,005,653	-		A4249_RS09990	0.86	-0.1
2,005,653	-		A4249_RS09990	0.86	-1.8
2,005,684	-		A4249_RS09990	0.88	-0.2
2,005,684	-		A4249_RS09990	0.88	+0.3
2,005,684	-		A4249_RS09990	0.88	-0.6
2,005,684	-		A4249_RS09990	0.88	-0.3
2,005,853	+				+0.3
2,005,853	+				-0.3
2,005,853	+				+0.4
2,005,854	-				+0.0
2,005,854	-				+0.2
2,005,873	+				+0.1
2,005,873	+				-1.5
2,005,873	+				-0.1
2,005,873	+				-0.9
2,005,874	-				-0.2
2,005,902	+				-0.8
2,005,902	+				+1.0
2,005,902	+				+0.5
2,005,902	+				+0.7
2,005,903	-				+0.3
2,005,903	-				-2.1
2,005,903	-				+0.0
2,005,903	-				+0.6
2,005,903	-				-0.1
2,005,903	-				-0.6
2,005,903	-				-0.3
2,005,903	-				-0.4
2,005,903	-				+0.1
2,005,903	-				-1.4
2,005,905	+				-0.1
2,005,905	+				-0.5
2,005,905	+				+0.4
2,005,906	-				-0.9
2,005,906	-				+0.0
2,005,906	-				-1.5
2,005,912	+				+0.6
2,005,912	+				+0.7
2,005,912	+				+0.8
2,005,967	+				+0.7
2,005,968	-				+0.1
2,005,968	-				+0.0
2,006,108	+				+0.6
2,006,109	-				+1.1
2,006,515	+		A4249_RS09995	0.36	-1.7
2,006,556	+		A4249_RS09995	0.40	+0.1
2,006,737	+		A4249_RS09995	0.56	-0.9
2,006,737	+		A4249_RS09995	0.56	+0.9
2,006,737	+		A4249_RS09995	0.56	-0.9
2,006,737	+		A4249_RS09995	0.56	+0.4
2,006,737	+		A4249_RS09995	0.56	-0.1
2,006,738	-		A4249_RS09995	0.56	-0.0
2,006,738	-		A4249_RS09995	0.56	-0.1
2,006,738	-		A4249_RS09995	0.56	+0.3
2,006,788	+		A4249_RS09995	0.61	-0.3
2,006,788	+		A4249_RS09995	0.61	-0.9
2,006,789	-		A4249_RS09995	0.61	-0.2
2,007,109	+		A4249_RS09995	0.90	+0.5
2,007,109	+		A4249_RS09995	0.90	+0.3
2,007,109	+		A4249_RS09995	0.90	-0.2
2,007,109	+		A4249_RS09995	0.90	+0.8
2,007,109	+		A4249_RS09995	0.90	-0.1
2,007,109	+		A4249_RS09995	0.90	+0.5
2,007,109	+		A4249_RS09995	0.90	-0.1
2,007,109	+		A4249_RS09995	0.90	-0.7
2,007,109	+		A4249_RS09995	0.90	+0.2
2,007,109	+		A4249_RS09995	0.90	+0.9
2,007,109	+		A4249_RS09995	0.90	-1.2
2,007,109	+		A4249_RS09995	0.90	+0.9
2,007,109	+		A4249_RS09995	0.90	+1.3
2,007,110	-		A4249_RS09995	0.90	-0.4
2,007,110	-		A4249_RS09995	0.90	-1.4
2,007,110	-		A4249_RS09995	0.90	+0.1
2,007,110	-		A4249_RS09995	0.90	+0.2
2,007,110	-		A4249_RS09995	0.90	-0.9
2,007,110	-		A4249_RS09995	0.90	+0.1
2,007,110	-		A4249_RS09995	0.90	-1.2
2,007,110	-		A4249_RS09995	0.90	+0.3
2,007,110	-		A4249_RS09995	0.90	-0.6
2,007,110	-		A4249_RS09995	0.90	-0.7
2,007,110	-		A4249_RS09995	0.90	+0.9
2,007,110	-		A4249_RS09995	0.90	-0.7
2,007,110	-		A4249_RS09995	0.90	+0.4
2,007,110	-		A4249_RS09995	0.90	-0.4
2,007,110	-		A4249_RS09995	0.90	-0.9
2,007,110	-		A4249_RS09995	0.90	+0.3
2,007,110	-		A4249_RS09995	0.90	+0.4
2,007,110	-		A4249_RS09995	0.90	-0.0
2,007,110	-		A4249_RS09995	0.90	+0.3
2,007,196	+				-0.2
2,007,196	+				+0.5
2,007,196	+				+0.2
2,007,196	+				+0.9
2,007,196	+				+1.8
2,007,196	+				-0.0
2,007,197	-				+1.1
2,007,197	-				+0.4
2,007,197	-				-0.8
2,007,197	-				-0.6
2,007,224	+				+1.7
2,007,224	+				-0.0
2,007,224	+				-0.1
2,007,224	+				-0.6
2,007,224	+				-0.1
2,007,224	+				+0.3
2,007,224	+				+0.6
2,007,224	+				+0.9
2,007,224	+				-0.1
2,007,224	+				-0.2
2,007,224	+				+0.2
2,007,224	+				+1.0
2,007,225	-				-0.5
2,007,225	-				+0.6
2,007,225	-				-0.9
2,007,225	-				+0.7
2,007,225	-				-0.1
2,007,225	-				+1.2
2,007,225	-				+0.2
2,007,246	+				+0.0
2,007,246	+				-0.1
2,007,246	+				-0.3
2,007,246	+				+0.6
2,007,246	+				+0.1
2,007,247	-				+0.1
2,007,247	-				-0.3
2,007,247	-				+0.1
2,007,482	-		A4249_RS10000	0.45	+0.0
2,007,526	-		A4249_RS10000	0.52	-0.4
2,007,660	+		A4249_RS10000	0.75	+0.4
2,007,672	+		A4249_RS10000	0.77	+0.4
2,007,672	+		A4249_RS10000	0.77	-0.1
2,007,672	+		A4249_RS10000	0.77	-0.6
2,007,672	+		A4249_RS10000	0.77	-0.5
2,007,672	+		A4249_RS10000	0.77	-1.0
2,007,672	+		A4249_RS10000	0.77	+0.3
2,007,673	-		A4249_RS10000	0.77	-0.5
2,007,673	-		A4249_RS10000	0.77	-0.4
2,007,673	-		A4249_RS10000	0.77	-0.0
2,007,673	-		A4249_RS10000	0.77	-0.2
2,007,673	-		A4249_RS10000	0.77	-0.8
2,007,673	-		A4249_RS10000	0.77	+0.4
2,007,673	-		A4249_RS10000	0.77	-0.9
2,007,673	-		A4249_RS10000	0.77	+0.7
2,007,673	-		A4249_RS10000	0.77	+0.2
2,007,673	-		A4249_RS10000	0.77	-0.4
2,007,673	-		A4249_RS10000	0.77	+0.4
2,007,673	-		A4249_RS10000	0.77	+0.8
2,008,007	+		A4249_RS10005	0.15	+1.0
2,008,007	+		A4249_RS10005	0.15	+0.7
2,008,007	+		A4249_RS10005	0.15	+1.2
2,008,008	-		A4249_RS10005	0.15	+0.7
2,008,008	-		A4249_RS10005	0.15	-0.4