Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09985

Experiment: Thymine 0.793 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymine 0.793 mM (C)
2,002,878	+		A4249_RS09980	0.64	+0.2
2,002,878	+		A4249_RS09980	0.64	-0.2
2,002,879	-		A4249_RS09980	0.64	-0.5
2,002,879	-		A4249_RS09980	0.64	+0.6
2,002,992	+		A4249_RS09980	0.69	+0.8
2,002,992	+		A4249_RS09980	0.69	+0.8
2,002,992	+		A4249_RS09980	0.69	+0.5
2,002,992	+		A4249_RS09980	0.69	-0.7
2,002,992	+		A4249_RS09980	0.69	+0.6
2,002,992	+		A4249_RS09980	0.69	-0.6
2,002,992	+		A4249_RS09980	0.69	+0.7
2,002,992	+		A4249_RS09980	0.69	-0.5
2,002,992	+		A4249_RS09980	0.69	+0.0
2,002,992	+		A4249_RS09980	0.69	+0.1
2,002,993	-		A4249_RS09980	0.69	-0.1
2,002,993	-		A4249_RS09980	0.69	-0.7
2,002,993	-		A4249_RS09980	0.69	-0.1
2,002,993	-		A4249_RS09980	0.69	+0.4
2,002,993	-		A4249_RS09980	0.69	-1.2
2,002,993	-		A4249_RS09980	0.69	+1.9
2,002,993	-		A4249_RS09980	0.69	-0.0
2,003,052	+		A4249_RS09980	0.72	+0.1
2,003,052	+		A4249_RS09980	0.72	+0.6
2,003,052	+		A4249_RS09980	0.72	+0.0
2,003,052	+		A4249_RS09980	0.72	+0.0
2,003,053	-		A4249_RS09980	0.72	-0.8
2,003,053	-		A4249_RS09980	0.72	-0.4
2,003,053	-		A4249_RS09980	0.72	-0.1
2,003,175	+		A4249_RS09980	0.77	-0.1
2,003,176	-		A4249_RS09980	0.77	+0.3
2,003,176	-		A4249_RS09980	0.77	-1.0
2,003,176	-		A4249_RS09980	0.77	+0.3
2,003,265	+		A4249_RS09980	0.81	-0.1
2,003,311	-		A4249_RS09980	0.82	-0.4
2,003,311	-		A4249_RS09980	0.82	+0.3
2,003,355	+		A4249_RS09980	0.84	+0.1
2,003,355	+		A4249_RS09980	0.84	+0.3
2,003,355	+		A4249_RS09980	0.84	-0.2
2,003,355	+		A4249_RS09980	0.84	-0.9
2,003,356	-		A4249_RS09980	0.84	-0.4
2,003,430	+		A4249_RS09980	0.87	+0.4
2,003,431	-		A4249_RS09980	0.88	-0.3
2,003,431	-		A4249_RS09980	0.88	+0.5
2,003,499	+				+0.9
2,003,499	+				-0.3
2,003,499	+				-1.3
2,003,499	+				+0.3
2,003,499	+				-0.4
2,003,499	+				+0.3
2,003,499	+				+0.2
2,003,500	-				-0.2
2,003,500	-				+1.0
2,003,500	-				-0.1
2,003,500	-				+0.0
2,003,500	-				-0.3
2,003,500	-				+0.1
2,003,589	+				-0.2
2,003,589	+				+0.8
2,003,590	-				+1.4
2,003,590	-				+0.4
2,003,606	+				+0.4
2,003,607	-				+0.1
2,003,607	-				-1.2
2,003,646	+				+0.3
2,003,646	+				+0.2
2,003,646	+				+0.1
2,003,646	+				-0.2
2,003,646	+				-1.0
2,003,646	+				+0.1
2,003,646	+				+0.5
2,003,647	-				-0.3
2,003,647	-				-1.5
2,003,647	-				+0.6
2,003,668	+				+0.1
2,003,694	+				+0.0
2,003,694	+				-0.0
2,003,695	-				-1.1
2,003,695	-				-0.4
2,003,695	-				+0.6
2,003,695	-				-1.0
2,003,920	+		A4249_RS09985	0.19	+0.0
2,003,920	+		A4249_RS09985	0.19	+1.4
2,003,920	+		A4249_RS09985	0.19	+0.9
2,003,920	+		A4249_RS09985	0.19	-0.3
2,003,920	+		A4249_RS09985	0.19	+0.6
2,003,920	+		A4249_RS09985	0.19	+0.5
2,003,920	+		A4249_RS09985	0.19	-0.4
2,003,920	+		A4249_RS09985	0.19	+0.2
2,003,920	+		A4249_RS09985	0.19	-1.6
2,003,920	+		A4249_RS09985	0.19	-0.3
2,003,921	-		A4249_RS09985	0.19	-0.2
2,003,921	-		A4249_RS09985	0.19	+0.2
2,003,921	-		A4249_RS09985	0.19	+0.4
2,003,921	-		A4249_RS09985	0.19	+0.0
2,003,921	-		A4249_RS09985	0.19	-0.5
2,003,922	+		A4249_RS09985	0.20	-0.9
2,003,922	+		A4249_RS09985	0.20	-0.2
2,003,922	+		A4249_RS09985	0.20	-0.1
2,003,922	+		A4249_RS09985	0.20	+0.9
2,003,922	+		A4249_RS09985	0.20	-0.1
2,003,923	-		A4249_RS09985	0.20	+0.2
2,003,923	-		A4249_RS09985	0.20	+0.2
2,003,923	-		A4249_RS09985	0.20	-0.3
2,003,923	-		A4249_RS09985	0.20	-0.6
2,003,923	-		A4249_RS09985	0.20	-0.5
2,003,923	-		A4249_RS09985	0.20	-0.3
2,003,923	-		A4249_RS09985	0.20	+0.1
2,003,923	-		A4249_RS09985	0.20	-0.6
2,003,923	-		A4249_RS09985	0.20	+0.1
2,004,012	+		A4249_RS09985	0.32	+1.2
2,004,012	+		A4249_RS09985	0.32	-1.1
2,004,012	+		A4249_RS09985	0.32	-1.6
2,004,012	+		A4249_RS09985	0.32	-0.2
2,004,012	+		A4249_RS09985	0.32	-0.1
2,004,012	+		A4249_RS09985	0.32	-0.3
2,004,013	-		A4249_RS09985	0.33	-1.0
2,004,013	-		A4249_RS09985	0.33	-0.6
2,004,051	+		A4249_RS09985	0.38	-0.5
2,004,054	+		A4249_RS09985	0.39	+0.3
2,004,054	+		A4249_RS09985	0.39	-0.3
2,004,054	+		A4249_RS09985	0.39	+0.8
2,004,054	+		A4249_RS09985	0.39	-0.4
2,004,054	+		A4249_RS09985	0.39	-0.3
2,004,054	+		A4249_RS09985	0.39	-1.0
2,004,054	+		A4249_RS09985	0.39	-2.1
2,004,054	+		A4249_RS09985	0.39	-0.8
2,004,055	-		A4249_RS09985	0.39	-0.7
2,004,055	-		A4249_RS09985	0.39	+0.6
2,004,117	+		A4249_RS09985	0.48	+1.3
2,004,117	+		A4249_RS09985	0.48	+0.3
2,004,117	+		A4249_RS09985	0.48	-0.1
2,004,117	+		A4249_RS09985	0.48	-0.6
2,004,117	+		A4249_RS09985	0.48	-1.1
2,004,118	-		A4249_RS09985	0.48	-0.9
2,004,121	+		A4249_RS09985	0.48	+0.6
2,004,121	+		A4249_RS09985	0.48	-0.3
2,004,121	+		A4249_RS09985	0.48	+0.1
2,004,121	+		A4249_RS09985	0.48	+0.3
2,004,121	+		A4249_RS09985	0.48	+0.4
2,004,121	+		A4249_RS09985	0.48	+0.1
2,004,121	+		A4249_RS09985	0.48	-1.0
2,004,121	+		A4249_RS09985	0.48	-0.6
2,004,121	+		A4249_RS09985	0.48	-0.7
2,004,121	+		A4249_RS09985	0.48	-0.3
2,004,121	+		A4249_RS09985	0.48	-0.2
2,004,121	+		A4249_RS09985	0.48	-0.7
2,004,121	+		A4249_RS09985	0.48	+0.6
2,004,121	+		A4249_RS09985	0.48	+0.5
2,004,121	+		A4249_RS09985	0.48	-0.6
2,004,122	-		A4249_RS09985	0.48	+0.4
2,004,122	-		A4249_RS09985	0.48	+0.1
2,004,122	-		A4249_RS09985	0.48	+0.1
2,004,122	-		A4249_RS09985	0.48	+0.0
2,004,122	-		A4249_RS09985	0.48	+0.3
2,004,122	-		A4249_RS09985	0.48	-0.8
2,004,122	-		A4249_RS09985	0.48	+1.1
2,004,122	-		A4249_RS09985	0.48	-0.1
2,004,122	-		A4249_RS09985	0.48	+0.1
2,004,122	-		A4249_RS09985	0.48	+0.7
2,004,122	-		A4249_RS09985	0.48	-0.5
2,004,122	-		A4249_RS09985	0.48	-0.2
2,004,122	-		A4249_RS09985	0.48	+0.2
2,004,122	-		A4249_RS09985	0.48	-0.4
2,004,123	+		A4249_RS09985	0.48	-0.1
2,004,123	+		A4249_RS09985	0.48	+2.0
2,004,150	+		A4249_RS09985	0.52	-0.0
2,004,150	+		A4249_RS09985	0.52	-0.4
2,004,150	+		A4249_RS09985	0.52	-1.0
2,004,150	+		A4249_RS09985	0.52	+0.6
2,004,150	+		A4249_RS09985	0.52	-0.5
2,004,150	+		A4249_RS09985	0.52	+0.5
2,004,150	+		A4249_RS09985	0.52	+0.3
2,004,150	+		A4249_RS09985	0.52	+1.5
2,004,150	+		A4249_RS09985	0.52	+0.3
2,004,150	+		A4249_RS09985	0.52	+0.3
2,004,150	+		A4249_RS09985	0.52	-0.9
2,004,150	+		A4249_RS09985	0.52	-0.1
2,004,151	-		A4249_RS09985	0.52	+0.8
2,004,151	-		A4249_RS09985	0.52	+0.2
2,004,151	-		A4249_RS09985	0.52	-1.5
2,004,151	-		A4249_RS09985	0.52	+0.5
2,004,151	-		A4249_RS09985	0.52	+0.7
2,004,151	-		A4249_RS09985	0.52	+0.5
2,004,151	-		A4249_RS09985	0.52	+0.2
2,004,151	-		A4249_RS09985	0.52	-0.1
2,004,151	-		A4249_RS09985	0.52	+0.1
2,004,156	+		A4249_RS09985	0.53	+0.5
2,004,156	+		A4249_RS09985	0.53	+0.9
2,004,214	-		A4249_RS09985	0.61	-0.1
2,004,276	+		A4249_RS09985	0.70	-0.6
2,004,277	-		A4249_RS09985	0.71	-0.0
2,004,354	+		A4249_RS09985	0.82	-1.6
2,004,354	+		A4249_RS09985	0.82	+1.3
2,004,354	+		A4249_RS09985	0.82	-0.6
2,004,354	+		A4249_RS09985	0.82	+0.8
2,004,354	+		A4249_RS09985	0.82	+1.1
2,004,354	+		A4249_RS09985	0.82	+0.3
2,004,354	+		A4249_RS09985	0.82	-0.2
2,004,355	-		A4249_RS09985	0.82	+0.1
2,004,355	-		A4249_RS09985	0.82	-1.2
2,004,355	-		A4249_RS09985	0.82	-0.3
2,004,355	-		A4249_RS09985	0.82	-0.8
2,004,355	-		A4249_RS09985	0.82	-0.3
2,004,355	-		A4249_RS09985	0.82	+0.4
2,004,481	+				-1.9
2,004,481	+				-0.1
2,004,482	-				+0.1
2,004,486	+				+0.5
2,004,486	+				-0.6
2,004,486	+				-0.4
2,004,486	+				+0.2
2,004,486	+				+0.0
2,004,486	+				-0.4
2,004,486	+				-0.1
2,004,486	+				+0.3
2,004,486	+				+0.1
2,004,487	-				+0.2
2,004,487	-				+0.3
2,004,487	-				+0.7
2,004,487	-				-0.2
2,004,487	-				+0.6
2,004,555	+				-1.0
2,004,555	+				-0.2
2,004,555	+				+0.6
2,004,556	-				-0.2
2,004,556	-				-0.5
2,004,556	-				+0.3
2,004,556	-				+0.5
2,004,556	-				+0.6
2,004,556	-				-0.5
2,004,678	+				+0.6
2,004,678	+				+0.0
2,004,678	+				+1.1
2,004,678	+				-0.4
2,004,679	-				-0.0
2,004,679	-				-0.3
2,004,679	-				+0.5
2,004,679	-				-0.3
2,004,831	+		A4249_RS09990	0.22	-0.4
2,004,832	-		A4249_RS09990	0.22	-0.1
2,004,867	+		A4249_RS09990	0.24	+0.8
2,004,867	+		A4249_RS09990	0.24	+0.4
2,004,868	-		A4249_RS09990	0.25	+0.3
2,004,868	-		A4249_RS09990	0.25	+0.1
2,005,003	+		A4249_RS09990	0.35	+0.3
2,005,004	-		A4249_RS09990	0.35	-0.4
2,005,005	+		A4249_RS09990	0.35	-0.2
2,005,005	+		A4249_RS09990	0.35	+1.2
2,005,005	+		A4249_RS09990	0.35	-0.1
2,005,005	+		A4249_RS09990	0.35	-0.2
2,005,005	+		A4249_RS09990	0.35	+0.6
2,005,006	-		A4249_RS09990	0.35	-2.4
2,005,006	-		A4249_RS09990	0.35	+0.8
2,005,006	-		A4249_RS09990	0.35	-0.4
2,005,006	-		A4249_RS09990	0.35	+0.3
2,005,006	-		A4249_RS09990	0.35	+0.2
2,005,192	-		A4249_RS09990	0.50	+0.9
2,005,199	-		A4249_RS09990	0.50	+0.3
2,005,335	+		A4249_RS09990	0.61	-0.6
2,005,335	+		A4249_RS09990	0.61	-0.5
2,005,335	+		A4249_RS09990	0.61	-0.8
2,005,335	+		A4249_RS09990	0.61	+0.6
2,005,335	+		A4249_RS09990	0.61	-0.2
2,005,336	-		A4249_RS09990	0.61	+0.8
2,005,336	-		A4249_RS09990	0.61	+0.5
2,005,336	-		A4249_RS09990	0.61	-0.1
2,005,336	-		A4249_RS09990	0.61	-0.6
2,005,336	-		A4249_RS09990	0.61	-0.4
2,005,336	-		A4249_RS09990	0.61	+0.0
2,005,336	-		A4249_RS09990	0.61	+0.1
2,005,380	+		A4249_RS09990	0.64	-0.1
2,005,380	+		A4249_RS09990	0.64	+0.1
2,005,380	+		A4249_RS09990	0.64	-1.0
2,005,381	-		A4249_RS09990	0.65	-0.4
2,005,381	-		A4249_RS09990	0.65	-1.1