Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09815 and A4249_RS09820 are separated by 131 nucleotides A4249_RS09820 and A4249_RS09825 are separated by 82 nucleotides A4249_RS09825 and A4249_RS09830 are separated by 4 nucleotides
A4249_RS09815: A4249_RS09815 - nucleoside transporter C-terminal domain-containing protein, at 1,955,700 to 1,956,974
_RS09815
A4249_RS09820: A4249_RS09820 - branched-chain amino acid aminotransferase, at 1,957,106 to 1,957,984
_RS09820
A4249_RS09825: A4249_RS09825 - response regulator transcription factor, at 1,958,067 to 1,958,804
_RS09825
A4249_RS09830: A4249_RS09830 - ATP-binding protein, at 1,958,809 to 1,960,176
_RS09830
Position (kb)
1957
1958 Strain fitness (log2 ratio)
-2
-1
0
1 at 1956.227 kb on - strand, within A4249_RS09815 at 1956.244 kb on + strand, within A4249_RS09815 at 1956.244 kb on + strand, within A4249_RS09815 at 1956.245 kb on - strand, within A4249_RS09815 at 1956.385 kb on + strand, within A4249_RS09815 at 1956.385 kb on + strand, within A4249_RS09815 at 1956.386 kb on - strand, within A4249_RS09815 at 1956.386 kb on - strand, within A4249_RS09815 at 1956.469 kb on + strand, within A4249_RS09815 at 1956.469 kb on + strand, within A4249_RS09815 at 1956.469 kb on + strand, within A4249_RS09815 at 1956.469 kb on + strand, within A4249_RS09815 at 1956.470 kb on - strand, within A4249_RS09815 at 1956.703 kb on + strand, within A4249_RS09815 at 1956.703 kb on + strand, within A4249_RS09815 at 1956.704 kb on - strand, within A4249_RS09815 at 1956.704 kb on - strand, within A4249_RS09815 at 1956.704 kb on - strand, within A4249_RS09815 at 1956.704 kb on - strand, within A4249_RS09815 at 1956.704 kb on - strand, within A4249_RS09815 at 1956.704 kb on - strand, within A4249_RS09815 at 1956.704 kb on - strand, within A4249_RS09815 at 1956.728 kb on - strand, within A4249_RS09815 at 1956.728 kb on - strand, within A4249_RS09815 at 1956.974 kb on + strand at 1956.974 kb on + strand at 1956.975 kb on - strand at 1956.975 kb on - strand at 1956.975 kb on - strand at 1956.975 kb on - strand at 1957.012 kb on + strand at 1957.013 kb on - strand at 1957.107 kb on + strand at 1957.107 kb on + strand at 1957.107 kb on + strand at 1957.108 kb on - strand at 1957.108 kb on - strand at 1957.108 kb on - strand at 1957.108 kb on - strand at 1957.108 kb on - strand at 1957.108 kb on - strand at 1957.108 kb on - strand at 1957.108 kb on - strand at 1958.017 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 1,956,227 - A4249_RS09815 0.41 +1.1 1,956,244 + A4249_RS09815 0.43 +0.1 1,956,244 + A4249_RS09815 0.43 +0.6 1,956,245 - A4249_RS09815 0.43 -0.0 1,956,385 + A4249_RS09815 0.54 -0.7 1,956,385 + A4249_RS09815 0.54 -0.3 1,956,386 - A4249_RS09815 0.54 +0.3 1,956,386 - A4249_RS09815 0.54 -1.0 1,956,469 + A4249_RS09815 0.60 -0.3 1,956,469 + A4249_RS09815 0.60 +0.5 1,956,469 + A4249_RS09815 0.60 -0.5 1,956,469 + A4249_RS09815 0.60 -0.7 1,956,470 - A4249_RS09815 0.60 +1.1 1,956,703 + A4249_RS09815 0.79 +1.1 1,956,703 + A4249_RS09815 0.79 +0.4 1,956,704 - A4249_RS09815 0.79 -0.6 1,956,704 - A4249_RS09815 0.79 -0.2 1,956,704 - A4249_RS09815 0.79 +0.8 1,956,704 - A4249_RS09815 0.79 -0.5 1,956,704 - A4249_RS09815 0.79 -2.6 1,956,704 - A4249_RS09815 0.79 +0.2 1,956,704 - A4249_RS09815 0.79 -0.0 1,956,728 - A4249_RS09815 0.81 +0.5 1,956,728 - A4249_RS09815 0.81 -0.1 1,956,974 + +0.1 1,956,974 + -1.2 1,956,975 - -1.9 1,956,975 - +0.6 1,956,975 - +0.1 1,956,975 - -0.1 1,957,012 + +0.6 1,957,013 - +0.8 1,957,107 + +0.1 1,957,107 + +0.5 1,957,107 + -0.2 1,957,108 - -0.3 1,957,108 - +0.3 1,957,108 - -0.1 1,957,108 - -0.3 1,957,108 - -0.6 1,957,108 - +0.7 1,957,108 - -0.0 1,957,108 - +0.2 1,958,017 - -0.5
Or see this region's nucleotide sequence