Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09650

Experiment: Thymine 0.793 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymine 0.793 mM (C)
1,922,257	+				+0.3
1,922,257	+				-0.2
1,922,258	-				-0.9
1,922,258	-				+0.3
1,922,322	+		A4249_RS09640	0.17	+0.3
1,922,323	-		A4249_RS09640	0.18	-0.2
1,922,323	-		A4249_RS09640	0.18	+0.9
1,922,430	+		A4249_RS09640	0.43	-2.2
1,922,431	-		A4249_RS09640	0.43	+0.1
1,922,462	+		A4249_RS09640	0.50	-0.2
1,922,462	+		A4249_RS09640	0.50	-0.3
1,922,462	+		A4249_RS09640	0.50	-2.5
1,922,463	-		A4249_RS09640	0.50	-0.9
1,922,463	-		A4249_RS09640	0.50	-1.8
1,922,703	+				-1.2
1,922,856	-		A4249_RS09645	0.34	-0.0
1,922,960	+		A4249_RS09645	0.54	-0.6
1,922,960	+		A4249_RS09645	0.54	+0.3
1,922,961	-		A4249_RS09645	0.55	-0.9
1,923,128	+		A4249_RS09645	0.88	+0.3
1,923,128	+		A4249_RS09645	0.88	+0.2
1,923,202	+				+0.5
1,923,202	+				-0.9
1,923,202	+				+0.4
1,923,203	-				-0.8
1,923,203	-				+0.2
1,923,203	-				-0.2
1,923,203	-				-0.1
1,923,249	+				+0.3
1,923,249	+				+0.4
1,923,250	-				-0.3
1,923,250	-				+0.0
1,923,250	-				+0.5
1,923,250	-				-0.0
1,923,369	+				+0.1
1,923,369	+				+0.3
1,923,370	-				+0.7
1,923,370	-				-1.1
1,923,370	-				+0.6
1,923,378	+				+0.1
1,923,378	+				+0.7
1,923,378	+				-1.3
1,923,379	-				-0.1
1,923,379	-				-0.2
1,923,379	-				-0.7
1,923,379	-				+0.1
1,923,379	-				-0.0
1,923,379	-				+0.1
1,923,379	-				+0.1
1,923,570	+		A4249_RS09650	0.19	+0.0
1,923,570	+		A4249_RS09650	0.19	-0.7
1,923,570	+		A4249_RS09650	0.19	+0.6
1,923,571	-		A4249_RS09650	0.19	+0.0
1,923,571	-		A4249_RS09650	0.19	-0.1
1,923,572	+		A4249_RS09650	0.19	+1.8
1,923,572	+		A4249_RS09650	0.19	-0.5
1,923,572	+		A4249_RS09650	0.19	+1.3
1,923,572	+		A4249_RS09650	0.19	+0.5
1,923,572	+		A4249_RS09650	0.19	+0.9
1,923,572	+		A4249_RS09650	0.19	+0.5
1,923,572	+		A4249_RS09650	0.19	+1.1
1,923,573	-		A4249_RS09650	0.19	-0.1
1,923,573	-		A4249_RS09650	0.19	+0.5
1,923,573	-		A4249_RS09650	0.19	+1.3
1,923,573	-		A4249_RS09650	0.19	-0.6
1,923,603	+		A4249_RS09650	0.20	+0.3
1,923,603	+		A4249_RS09650	0.20	+0.5
1,923,603	+		A4249_RS09650	0.20	+0.3
1,923,604	-		A4249_RS09650	0.21	-0.3
1,923,661	-		A4249_RS09650	0.24	-0.2
1,923,661	-		A4249_RS09650	0.24	-1.2
1,923,661	-		A4249_RS09650	0.24	-0.4
1,923,661	-		A4249_RS09650	0.24	-0.4
1,923,661	-		A4249_RS09650	0.24	-0.2
1,923,708	+		A4249_RS09650	0.26	+0.6
1,923,708	+		A4249_RS09650	0.26	+0.7
1,923,708	+		A4249_RS09650	0.26	+0.1
1,923,708	+		A4249_RS09650	0.26	+0.6
1,923,709	-		A4249_RS09650	0.26	+0.8
1,923,709	-		A4249_RS09650	0.26	-1.8
1,923,709	-		A4249_RS09650	0.26	+0.6
1,923,709	-		A4249_RS09650	0.26	+0.1
1,923,709	-		A4249_RS09650	0.26	-0.7
1,923,742	-		A4249_RS09650	0.28	+0.5
1,924,005	+		A4249_RS09650	0.43	+0.4
1,924,005	+		A4249_RS09650	0.43	+0.3
1,924,006	-		A4249_RS09650	0.43	-0.1
1,924,065	+		A4249_RS09650	0.46	-1.2
1,924,065	+		A4249_RS09650	0.46	+1.0
1,924,065	+		A4249_RS09650	0.46	-1.2
1,924,065	+		A4249_RS09650	0.46	+0.7
1,924,065	+		A4249_RS09650	0.46	+0.1
1,924,066	-		A4249_RS09650	0.46	-0.3
1,924,066	-		A4249_RS09650	0.46	+0.9
1,924,066	-		A4249_RS09650	0.46	-0.0
1,924,066	-		A4249_RS09650	0.46	-0.6
1,924,071	+		A4249_RS09650	0.47	-0.1
1,924,072	-		A4249_RS09650	0.47	+0.8
1,924,072	-		A4249_RS09650	0.47	-0.2
1,924,072	-		A4249_RS09650	0.47	-1.5
1,924,091	+		A4249_RS09650	0.48	-0.4
1,924,091	+		A4249_RS09650	0.48	-0.3
1,924,091	+		A4249_RS09650	0.48	-0.1
1,924,091	+		A4249_RS09650	0.48	+0.5
1,924,092	-		A4249_RS09650	0.48	+1.2
1,924,242	+		A4249_RS09650	0.56	-0.5
1,924,242	+		A4249_RS09650	0.56	+0.1
1,924,242	+		A4249_RS09650	0.56	+0.2
1,924,242	+		A4249_RS09650	0.56	-0.1
1,924,242	+		A4249_RS09650	0.56	+0.2
1,924,242	+		A4249_RS09650	0.56	-0.4
1,924,243	-		A4249_RS09650	0.56	+0.1
1,924,243	-		A4249_RS09650	0.56	-0.4
1,924,243	-		A4249_RS09650	0.56	+0.6
1,924,243	-		A4249_RS09650	0.56	-0.2
1,924,243	-		A4249_RS09650	0.56	-0.2
1,924,344	+		A4249_RS09650	0.62	-0.1
1,924,344	+		A4249_RS09650	0.62	-0.8
1,924,344	+		A4249_RS09650	0.62	+0.4
1,924,344	+		A4249_RS09650	0.62	+1.0
1,924,344	+		A4249_RS09650	0.62	-0.2
1,924,344	+		A4249_RS09650	0.62	-0.1
1,924,345	-		A4249_RS09650	0.62	+1.0
1,924,345	-		A4249_RS09650	0.62	-0.0
1,924,383	+		A4249_RS09650	0.64	+0.7
1,924,384	-		A4249_RS09650	0.64	+0.9
1,924,384	-		A4249_RS09650	0.64	-0.6
1,924,384	-		A4249_RS09650	0.64	-0.5
1,924,437	+		A4249_RS09650	0.67	-0.5
1,924,437	+		A4249_RS09650	0.67	+0.1
1,924,437	+		A4249_RS09650	0.67	-0.2
1,924,437	+		A4249_RS09650	0.67	-0.1
1,924,437	+		A4249_RS09650	0.67	-0.0
1,924,437	+		A4249_RS09650	0.67	-0.2
1,924,437	+		A4249_RS09650	0.67	+0.5
1,924,438	-		A4249_RS09650	0.67	-0.8
1,924,438	-		A4249_RS09650	0.67	-0.0
1,924,438	-		A4249_RS09650	0.67	+0.6
1,924,438	-		A4249_RS09650	0.67	-0.3
1,924,476	+		A4249_RS09650	0.69	-0.1
1,924,476	+		A4249_RS09650	0.69	-0.2
1,924,476	+		A4249_RS09650	0.69	-0.2
1,924,476	+		A4249_RS09650	0.69	-1.3
1,924,564	-		A4249_RS09650	0.74	-0.0
1,924,564	-		A4249_RS09650	0.74	+0.1
1,924,564	-		A4249_RS09650	0.74	+0.2
1,924,564	-		A4249_RS09650	0.74	+0.3
1,924,593	+		A4249_RS09650	0.76	-0.0
1,924,593	+		A4249_RS09650	0.76	-1.2
1,924,593	+		A4249_RS09650	0.76	+0.5
1,924,593	+		A4249_RS09650	0.76	-0.2
1,924,593	+		A4249_RS09650	0.76	+0.4
1,924,594	-		A4249_RS09650	0.76	+1.0
1,924,594	-		A4249_RS09650	0.76	-0.7
1,924,594	-		A4249_RS09650	0.76	+0.8
1,924,594	-		A4249_RS09650	0.76	-0.3
1,924,594	-		A4249_RS09650	0.76	-0.6
1,924,595	+		A4249_RS09650	0.76	+0.3
1,924,595	+		A4249_RS09650	0.76	-0.5
1,924,596	-		A4249_RS09650	0.76	+0.5
1,924,596	-		A4249_RS09650	0.76	+0.4
1,924,614	+		A4249_RS09650	0.77	-0.1
1,924,615	-		A4249_RS09650	0.77	+0.0
1,924,615	-		A4249_RS09650	0.77	+0.1
1,924,615	-		A4249_RS09650	0.77	-0.3
1,924,615	-		A4249_RS09650	0.77	+3.1
1,924,615	-		A4249_RS09650	0.77	-0.6
1,924,615	-		A4249_RS09650	0.77	+0.8
1,924,615	-		A4249_RS09650	0.77	+0.1
1,924,623	+		A4249_RS09650	0.78	-0.1
1,924,623	+		A4249_RS09650	0.78	-0.0
1,924,623	+		A4249_RS09650	0.78	+0.0
1,924,624	-		A4249_RS09650	0.78	+1.1
1,924,624	-		A4249_RS09650	0.78	+0.3
1,924,647	+		A4249_RS09650	0.79	-0.0
1,924,647	+		A4249_RS09650	0.79	+0.3
1,924,648	-		A4249_RS09650	0.79	-1.2
1,924,648	-		A4249_RS09650	0.79	+0.3
1,924,659	+		A4249_RS09650	0.80	+0.8
1,924,659	+		A4249_RS09650	0.80	-0.4
1,924,659	+		A4249_RS09650	0.80	-0.3
1,924,660	-		A4249_RS09650	0.80	-0.3
1,924,683	+		A4249_RS09650	0.81	-0.0
1,924,683	+		A4249_RS09650	0.81	-0.1
1,924,684	-		A4249_RS09650	0.81	+0.3
1,924,684	-		A4249_RS09650	0.81	+0.3
1,924,821	+		A4249_RS09650	0.89	-0.0
1,924,821	+		A4249_RS09650	0.89	+0.0
1,924,821	+		A4249_RS09650	0.89	-0.2
1,924,822	-		A4249_RS09650	0.89	-0.7
1,924,851	+				+0.1
1,924,851	+				-0.2
1,924,851	+				+0.3
1,924,851	+				+0.2
1,924,852	-				+0.5
1,924,852	-				-0.8
1,925,022	+				+0.9
1,925,022	+				+0.2
1,925,023	-				-0.4
1,925,023	-				-1.7
1,925,023	-				-1.0
1,925,023	-				-0.3
1,925,023	-				+0.7
1,925,023	-				+0.1
1,925,023	-				-0.5
1,925,023	-				+0.2
1,925,023	-				-1.0
1,925,142	+		A4249_RS09655	0.11	+0.4
1,925,142	+		A4249_RS09655	0.11	-0.5
1,925,142	+		A4249_RS09655	0.11	+0.0
1,925,142	+		A4249_RS09655	0.11	-0.6
1,925,142	+		A4249_RS09655	0.11	-0.6
1,925,142	+		A4249_RS09655	0.11	-0.3
1,925,142	+		A4249_RS09655	0.11	-0.9
1,925,142	+		A4249_RS09655	0.11	+0.1
1,925,143	-		A4249_RS09655	0.11	-0.1
1,925,143	-		A4249_RS09655	0.11	+0.5
1,925,143	-		A4249_RS09655	0.11	+0.1
1,925,143	-		A4249_RS09655	0.11	+0.1
1,925,143	-		A4249_RS09655	0.11	+0.4
1,925,143	-		A4249_RS09655	0.11	-0.1
1,925,274	-		A4249_RS09655	0.24	-0.1
1,925,279	+		A4249_RS09655	0.24	-0.1
1,925,279	+		A4249_RS09655	0.24	+0.3
1,925,279	+		A4249_RS09655	0.24	+0.3
1,925,280	-		A4249_RS09655	0.25	-0.1
1,925,280	-		A4249_RS09655	0.25	-0.5
1,925,280	-		A4249_RS09655	0.25	+0.3
1,925,448	-		A4249_RS09655	0.41	-1.3
1,925,448	-		A4249_RS09655	0.41	-0.3
1,925,549	+		A4249_RS09655	0.51	-0.9
1,925,549	+		A4249_RS09655	0.51	+0.3
1,925,549	+		A4249_RS09655	0.51	+0.1
1,925,549	+		A4249_RS09655	0.51	+0.5
1,925,549	+		A4249_RS09655	0.51	+0.2
1,925,549	+		A4249_RS09655	0.51	+0.6
1,925,549	+		A4249_RS09655	0.51	+0.2
1,925,549	+		A4249_RS09655	0.51	-0.1
1,925,549	+		A4249_RS09655	0.51	+1.0
1,925,549	+		A4249_RS09655	0.51	+0.2
1,925,549	+		A4249_RS09655	0.51	+0.3
1,925,549	+		A4249_RS09655	0.51	+0.1
1,925,549	+		A4249_RS09655	0.51	-0.2
1,925,550	-		A4249_RS09655	0.52	-0.3
1,925,550	-		A4249_RS09655	0.52	-0.4
1,925,550	-		A4249_RS09655	0.52	+1.1
1,925,550	-		A4249_RS09655	0.52	+0.5
1,925,550	-		A4249_RS09655	0.52	-0.0
1,925,550	-		A4249_RS09655	0.52	+0.1
1,925,550	-		A4249_RS09655	0.52	-0.4
1,925,645	+		A4249_RS09655	0.61	-0.5
1,925,645	+		A4249_RS09655	0.61	-0.2
1,925,645	+		A4249_RS09655	0.61	+0.7
1,925,646	-		A4249_RS09655	0.61	-0.3
1,925,646	-		A4249_RS09655	0.61	+0.3
1,925,668	-		A4249_RS09655	0.63	+0.5
1,925,668	-		A4249_RS09655	0.63	-0.3
1,925,839	-		A4249_RS09655	0.80	-0.4
1,925,839	-		A4249_RS09655	0.80	+0.8
1,925,839	-		A4249_RS09655	0.80	+0.1
1,925,994	+				+0.2
1,925,994	+				+0.1
1,925,995	-				-0.2
1,925,995	-				-0.5
1,925,995	-				+0.2
1,925,995	-				-1.1
1,926,024	+				+0.3