Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02235 and A4249_RS02240 overlap by 11 nucleotides A4249_RS02240 and A4249_RS02245 overlap by 43 nucleotides A4249_RS02245 and A4249_RS02250 are separated by 66 nucleotides A4249_RS02250 and A4249_RS02255 overlap by 4 nucleotides
A4249_RS02235: A4249_RS02235 - SDR family oxidoreductase, at 470,989 to 471,771
_RS02235
A4249_RS02240: A4249_RS02240 - lipid A biosynthesis acyltransferase, at 471,761 to 472,729
_RS02240
A4249_RS02245: A4249_RS02245 - response regulator, at 472,687 to 473,193
_RS02245
A4249_RS02250: A4249_RS02250 - M23 family metallopeptidase, at 473,260 to 474,117
_RS02250
A4249_RS02255: A4249_RS02255 - DUF2093 domain-containing protein, at 474,114 to 474,314
_RS02255
Position (kb) 472
473
474 Strain fitness (log2 ratio) -2
-1
0
1
2 at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.695 kb on - strand at 471.695 kb on - strand at 471.695 kb on - strand at 471.695 kb on - strand at 471.718 kb on + strand at 471.718 kb on + strand at 471.718 kb on + strand at 471.718 kb on + strand at 471.718 kb on + strand at 471.719 kb on - strand at 471.719 kb on - strand at 471.719 kb on - strand at 471.719 kb on - strand at 471.719 kb on - strand at 471.719 kb on - strand at 471.719 kb on - strand at 472.688 kb on + strand at 472.688 kb on + strand at 472.688 kb on + strand at 472.688 kb on + strand at 472.688 kb on + strand at 472.688 kb on + strand at 472.688 kb on + strand at 472.688 kb on + strand at 472.688 kb on + strand at 472.688 kb on + strand at 472.689 kb on - strand at 472.689 kb on - strand at 472.689 kb on - strand at 472.689 kb on - strand at 472.689 kb on - strand at 472.728 kb on - strand at 472.739 kb on + strand, within A4249_RS02245 at 472.739 kb on + strand, within A4249_RS02245 at 472.740 kb on - strand, within A4249_RS02245 at 472.778 kb on + strand, within A4249_RS02245 at 472.778 kb on + strand, within A4249_RS02245 at 472.778 kb on + strand, within A4249_RS02245 at 472.778 kb on + strand, within A4249_RS02245 at 472.778 kb on + strand, within A4249_RS02245 at 472.778 kb on + strand, within A4249_RS02245 at 472.778 kb on + strand, within A4249_RS02245 at 472.778 kb on + strand, within A4249_RS02245 at 472.779 kb on - strand, within A4249_RS02245 at 472.779 kb on - strand, within A4249_RS02245 at 472.779 kb on - strand, within A4249_RS02245 at 472.779 kb on - strand, within A4249_RS02245 at 472.779 kb on - strand, within A4249_RS02245 at 472.779 kb on - strand, within A4249_RS02245 at 472.779 kb on - strand, within A4249_RS02245 at 472.898 kb on + strand, within A4249_RS02245 at 472.898 kb on + strand, within A4249_RS02245 at 473.090 kb on + strand, within A4249_RS02245 at 473.091 kb on - strand, within A4249_RS02245 at 473.091 kb on - strand, within A4249_RS02245 at 473.091 kb on - strand, within A4249_RS02245 at 473.091 kb on - strand, within A4249_RS02245 at 473.091 kb on - strand, within A4249_RS02245 at 473.091 kb on - strand, within A4249_RS02245 at 473.091 kb on - strand, within A4249_RS02245 at 473.091 kb on - strand, within A4249_RS02245 at 473.142 kb on + strand, within A4249_RS02245 at 473.142 kb on + strand, within A4249_RS02245 at 473.142 kb on + strand, within A4249_RS02245 at 473.143 kb on - strand at 473.230 kb on + strand at 473.236 kb on + strand at 473.237 kb on - strand at 473.237 kb on - strand at 473.444 kb on + strand, within A4249_RS02250 at 473.444 kb on + strand, within A4249_RS02250 at 473.444 kb on + strand, within A4249_RS02250 at 473.444 kb on + strand, within A4249_RS02250 at 473.444 kb on + strand, within A4249_RS02250 at 473.445 kb on - strand, within A4249_RS02250 at 473.445 kb on - strand, within A4249_RS02250 at 473.445 kb on - strand, within A4249_RS02250 at 473.445 kb on - strand, within A4249_RS02250 at 473.445 kb on - strand, within A4249_RS02250 at 473.582 kb on + strand, within A4249_RS02250 at 473.582 kb on + strand, within A4249_RS02250 at 473.582 kb on + strand, within A4249_RS02250 at 473.582 kb on + strand, within A4249_RS02250 at 473.582 kb on + strand, within A4249_RS02250 at 473.583 kb on - strand, within A4249_RS02250 at 473.583 kb on - strand, within A4249_RS02250 at 473.583 kb on - strand, within A4249_RS02250 at 473.608 kb on + strand, within A4249_RS02250 at 473.608 kb on + strand, within A4249_RS02250 at 473.645 kb on + strand, within A4249_RS02250 at 473.646 kb on - strand, within A4249_RS02250 at 474.160 kb on + strand, within A4249_RS02255 at 474.160 kb on + strand, within A4249_RS02255 at 474.160 kb on + strand, within A4249_RS02255 at 474.161 kb on - strand, within A4249_RS02255
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 471,694 + -1.4 471,694 + -1.0 471,694 + -0.4 471,694 + +0.1 471,694 + +0.1 471,694 + -0.0 471,694 + +0.3 471,694 + +0.2 471,694 + -0.4 471,695 - -0.1 471,695 - -0.2 471,695 - -0.2 471,695 - -0.2 471,718 + +0.3 471,718 + -0.2 471,718 + +0.2 471,718 + -0.7 471,718 + -0.1 471,719 - -0.0 471,719 - -0.2 471,719 - -0.3 471,719 - -0.0 471,719 - -0.0 471,719 - -0.1 471,719 - +0.1 472,688 + -0.1 472,688 + +0.0 472,688 + +0.0 472,688 + -0.0 472,688 + -0.2 472,688 + -0.1 472,688 + -0.1 472,688 + +0.0 472,688 + -0.2 472,688 + -0.1 472,689 - +0.1 472,689 - -0.8 472,689 - -0.1 472,689 - -0.1 472,689 - -0.1 472,728 - -0.2 472,739 + A4249_RS02245 0.10 -0.4 472,739 + A4249_RS02245 0.10 -0.6 472,740 - A4249_RS02245 0.10 -0.2 472,778 + A4249_RS02245 0.18 -0.7 472,778 + A4249_RS02245 0.18 -0.3 472,778 + A4249_RS02245 0.18 -0.4 472,778 + A4249_RS02245 0.18 +0.0 472,778 + A4249_RS02245 0.18 -0.4 472,778 + A4249_RS02245 0.18 -0.5 472,778 + A4249_RS02245 0.18 +0.6 472,778 + A4249_RS02245 0.18 +0.3 472,779 - A4249_RS02245 0.18 +0.2 472,779 - A4249_RS02245 0.18 +0.0 472,779 - A4249_RS02245 0.18 +0.0 472,779 - A4249_RS02245 0.18 +0.2 472,779 - A4249_RS02245 0.18 -0.8 472,779 - A4249_RS02245 0.18 -0.9 472,779 - A4249_RS02245 0.18 +0.1 472,898 + A4249_RS02245 0.42 -0.2 472,898 + A4249_RS02245 0.42 -0.3 473,090 + A4249_RS02245 0.79 -0.2 473,091 - A4249_RS02245 0.80 -2.4 473,091 - A4249_RS02245 0.80 +0.5 473,091 - A4249_RS02245 0.80 +0.7 473,091 - A4249_RS02245 0.80 -0.6 473,091 - A4249_RS02245 0.80 -1.1 473,091 - A4249_RS02245 0.80 +0.0 473,091 - A4249_RS02245 0.80 -0.5 473,091 - A4249_RS02245 0.80 -0.7 473,142 + A4249_RS02245 0.90 +0.4 473,142 + A4249_RS02245 0.90 +2.0 473,142 + A4249_RS02245 0.90 -0.2 473,143 - +1.9 473,230 + -0.1 473,236 + +0.6 473,237 - -0.1 473,237 - +0.3 473,444 + A4249_RS02250 0.21 +0.8 473,444 + A4249_RS02250 0.21 -0.4 473,444 + A4249_RS02250 0.21 +0.5 473,444 + A4249_RS02250 0.21 -0.4 473,444 + A4249_RS02250 0.21 +0.3 473,445 - A4249_RS02250 0.22 -0.3 473,445 - A4249_RS02250 0.22 -0.5 473,445 - A4249_RS02250 0.22 +0.5 473,445 - A4249_RS02250 0.22 +0.2 473,445 - A4249_RS02250 0.22 -0.7 473,582 + A4249_RS02250 0.38 -0.2 473,582 + A4249_RS02250 0.38 -0.7 473,582 + A4249_RS02250 0.38 +0.2 473,582 + A4249_RS02250 0.38 +0.8 473,582 + A4249_RS02250 0.38 +0.3 473,583 - A4249_RS02250 0.38 -1.9 473,583 - A4249_RS02250 0.38 +0.1 473,583 - A4249_RS02250 0.38 -0.3 473,608 + A4249_RS02250 0.41 -0.1 473,608 + A4249_RS02250 0.41 -0.0 473,645 + A4249_RS02250 0.45 +0.8 473,646 - A4249_RS02250 0.45 +0.3 474,160 + A4249_RS02255 0.23 +0.6 474,160 + A4249_RS02255 0.23 -0.4 474,160 + A4249_RS02255 0.23 +1.1 474,161 - A4249_RS02255 0.23 -0.3
Or see this region's nucleotide sequence