Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02205 and A4249_RS02210 are separated by 310 nucleotides A4249_RS02210 and A4249_RS02215 overlap by 6 nucleotides A4249_RS02215 and A4249_RS02220 overlap by 1 nucleotides
A4249_RS02205: A4249_RS02205 - PhoH family protein, at 465,639 to 466,430
_RS02205
A4249_RS02210: A4249_RS02210 - gamma carbonic anhydrase family protein, at 466,741 to 467,268
_RS02210
A4249_RS02215: A4249_RS02215 - bifunctional riboflavin kinase/FAD synthetase, at 467,263 to 468,195
_RS02215
A4249_RS02220: A4249_RS02220 - MaoC family dehydratase, at 468,195 to 468,656
_RS02220
Position (kb) 466
467
468 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 465.823 kb on - strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.853 kb on + strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.854 kb on - strand, within A4249_RS02205 at 465.914 kb on + strand, within A4249_RS02205 at 465.914 kb on + strand, within A4249_RS02205 at 465.914 kb on + strand, within A4249_RS02205 at 465.914 kb on + strand, within A4249_RS02205 at 465.914 kb on + strand, within A4249_RS02205 at 465.915 kb on - strand, within A4249_RS02205 at 465.915 kb on - strand, within A4249_RS02205 at 465.915 kb on - strand, within A4249_RS02205 at 465.916 kb on + strand, within A4249_RS02205 at 465.916 kb on + strand, within A4249_RS02205 at 465.916 kb on + strand, within A4249_RS02205 at 465.917 kb on - strand, within A4249_RS02205 at 465.917 kb on - strand, within A4249_RS02205 at 466.001 kb on - strand, within A4249_RS02205 at 466.015 kb on + strand, within A4249_RS02205 at 466.015 kb on + strand, within A4249_RS02205 at 466.016 kb on - strand, within A4249_RS02205 at 466.150 kb on + strand, within A4249_RS02205 at 466.150 kb on + strand, within A4249_RS02205 at 466.150 kb on + strand, within A4249_RS02205 at 466.151 kb on - strand, within A4249_RS02205 at 466.151 kb on - strand, within A4249_RS02205 at 466.151 kb on - strand, within A4249_RS02205 at 466.258 kb on + strand, within A4249_RS02205 at 466.259 kb on - strand, within A4249_RS02205 at 466.289 kb on - strand, within A4249_RS02205 at 466.736 kb on + strand at 466.736 kb on + strand at 466.737 kb on - strand at 466.737 kb on - strand at 466.737 kb on - strand at 466.795 kb on + strand, within A4249_RS02210 at 466.795 kb on + strand, within A4249_RS02210 at 466.821 kb on - strand, within A4249_RS02210 at 466.823 kb on + strand, within A4249_RS02210 at 466.823 kb on + strand, within A4249_RS02210 at 467.026 kb on + strand, within A4249_RS02210 at 467.026 kb on + strand, within A4249_RS02210 at 467.027 kb on - strand, within A4249_RS02210 at 467.027 kb on - strand, within A4249_RS02210 at 467.027 kb on - strand, within A4249_RS02210 at 467.027 kb on - strand, within A4249_RS02210 at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.264 kb on + strand at 467.264 kb on + strand at 467.264 kb on + strand at 467.265 kb on - strand at 467.265 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 465,823 - A4249_RS02205 0.23 -0.8 465,853 + A4249_RS02205 0.27 +1.0 465,853 + A4249_RS02205 0.27 -2.0 465,853 + A4249_RS02205 0.27 -0.2 465,853 + A4249_RS02205 0.27 +0.1 465,853 + A4249_RS02205 0.27 +0.5 465,853 + A4249_RS02205 0.27 +0.1 465,853 + A4249_RS02205 0.27 +0.1 465,853 + A4249_RS02205 0.27 +0.3 465,853 + A4249_RS02205 0.27 +0.4 465,853 + A4249_RS02205 0.27 -0.3 465,853 + A4249_RS02205 0.27 +0.7 465,853 + A4249_RS02205 0.27 +0.0 465,853 + A4249_RS02205 0.27 +0.5 465,853 + A4249_RS02205 0.27 -0.3 465,854 - A4249_RS02205 0.27 -0.4 465,854 - A4249_RS02205 0.27 -0.6 465,854 - A4249_RS02205 0.27 +0.4 465,854 - A4249_RS02205 0.27 -0.6 465,854 - A4249_RS02205 0.27 -1.0 465,854 - A4249_RS02205 0.27 -0.5 465,854 - A4249_RS02205 0.27 -0.3 465,854 - A4249_RS02205 0.27 +0.7 465,854 - A4249_RS02205 0.27 -1.0 465,854 - A4249_RS02205 0.27 -0.5 465,854 - A4249_RS02205 0.27 +0.8 465,854 - A4249_RS02205 0.27 +1.3 465,854 - A4249_RS02205 0.27 +1.2 465,914 + A4249_RS02205 0.35 +0.6 465,914 + A4249_RS02205 0.35 +0.6 465,914 + A4249_RS02205 0.35 -0.4 465,914 + A4249_RS02205 0.35 -1.3 465,914 + A4249_RS02205 0.35 +1.3 465,915 - A4249_RS02205 0.35 -3.0 465,915 - A4249_RS02205 0.35 +0.7 465,915 - A4249_RS02205 0.35 +0.5 465,916 + A4249_RS02205 0.35 +1.1 465,916 + A4249_RS02205 0.35 -0.1 465,916 + A4249_RS02205 0.35 +0.3 465,917 - A4249_RS02205 0.35 +0.4 465,917 - A4249_RS02205 0.35 +0.2 466,001 - A4249_RS02205 0.46 +0.8 466,015 + A4249_RS02205 0.47 +0.4 466,015 + A4249_RS02205 0.47 -0.1 466,016 - A4249_RS02205 0.48 +0.9 466,150 + A4249_RS02205 0.65 +0.0 466,150 + A4249_RS02205 0.65 +0.5 466,150 + A4249_RS02205 0.65 -0.1 466,151 - A4249_RS02205 0.65 +0.9 466,151 - A4249_RS02205 0.65 +0.2 466,151 - A4249_RS02205 0.65 +0.2 466,258 + A4249_RS02205 0.78 +0.2 466,259 - A4249_RS02205 0.78 -0.8 466,289 - A4249_RS02205 0.82 -0.9 466,736 + +0.1 466,736 + +0.9 466,737 - -0.3 466,737 - +0.3 466,737 - -0.1 466,795 + A4249_RS02210 0.10 +0.8 466,795 + A4249_RS02210 0.10 -1.1 466,821 - A4249_RS02210 0.15 -0.4 466,823 + A4249_RS02210 0.16 +0.5 466,823 + A4249_RS02210 0.16 +1.3 467,026 + A4249_RS02210 0.54 +0.1 467,026 + A4249_RS02210 0.54 +0.0 467,027 - A4249_RS02210 0.54 -0.4 467,027 - A4249_RS02210 0.54 -1.1 467,027 - A4249_RS02210 0.54 -0.6 467,027 - A4249_RS02210 0.54 -0.1 467,221 + +0.3 467,221 + +0.7 467,221 + +0.6 467,221 + -0.5 467,221 + -0.2 467,221 + +0.4 467,221 + +0.0 467,221 + -0.6 467,221 + +0.1 467,221 + +0.1 467,221 + -0.1 467,221 + -0.4 467,221 + +0.2 467,221 + -0.7 467,221 + +0.2 467,221 + -0.1 467,222 - -0.8 467,222 - +0.6 467,222 - +0.3 467,222 - +0.9 467,222 - -0.5 467,222 - -0.1 467,222 - +0.6 467,222 - -0.3 467,222 - -1.1 467,222 - -0.2 467,222 - +0.1 467,264 + +0.1 467,264 + +0.8 467,264 + -0.2 467,265 - +0.8 467,265 - +0.3
Or see this region's nucleotide sequence