Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS19290

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
4,833,190	+				-0.5
4,833,270	+				-3.0
4,833,291	+		ABI39_RS19285	0.11	-1.5
4,833,415	+		ABI39_RS19285	0.26	-3.3
4,833,416	-		ABI39_RS19285	0.26	+1.2
4,833,416	-		ABI39_RS19285	0.26	-0.8
4,833,540	+		ABI39_RS19285	0.41	+1.4
4,833,766	+		ABI39_RS19285	0.68	+0.6
4,833,895	+		ABI39_RS19285	0.84	-0.1
4,834,196	-		ABI39_RS19290	0.10	+0.6
4,834,284	-		ABI39_RS19290	0.18	-1.8
4,834,290	+		ABI39_RS19290	0.18	-0.5
4,834,290	+		ABI39_RS19290	0.18	+0.2
4,834,291	-		ABI39_RS19290	0.18	+0.4
4,834,291	-		ABI39_RS19290	0.18	+0.6
4,834,413	+		ABI39_RS19290	0.29	+1.1
4,834,427	-		ABI39_RS19290	0.30	-1.0
4,834,427	-		ABI39_RS19290	0.30	-0.5
4,834,434	-		ABI39_RS19290	0.30	+0.6
4,834,497	-		ABI39_RS19290	0.36	-0.1
4,834,618	+		ABI39_RS19290	0.46	-0.1
4,834,619	-		ABI39_RS19290	0.46	+1.7
4,834,620	+		ABI39_RS19290	0.46	+2.2
4,834,620	+		ABI39_RS19290	0.46	+1.0
4,834,626	+		ABI39_RS19290	0.47	-1.1
4,834,635	+		ABI39_RS19290	0.48	-0.8
4,834,689	+		ABI39_RS19290	0.52	-1.0
4,834,757	+		ABI39_RS19290	0.58	+0.5
4,834,984	+		ABI39_RS19290	0.77	-1.8
4,834,984	+		ABI39_RS19290	0.77	-2.0
4,835,257	+				-0.1
4,835,459	+		ABI39_RS19295	0.14	+0.3
4,835,647	+		ABI39_RS19295	0.28	+1.2
4,835,742	+		ABI39_RS19295	0.34	+0.3
4,835,742	+		ABI39_RS19295	0.34	+1.4
4,835,888	-		ABI39_RS19295	0.44	+0.7
4,835,888	-		ABI39_RS19295	0.44	+0.6
4,835,960	+		ABI39_RS19295	0.49	+0.3
4,836,016	+		ABI39_RS19295	0.53	-0.1
4,836,016	+		ABI39_RS19295	0.53	-1.0
4,836,017	-		ABI39_RS19295	0.53	-0.1
4,836,017	-		ABI39_RS19295	0.53	-2.3
4,836,017	-		ABI39_RS19295	0.53	+0.9
4,836,056	+		ABI39_RS19295	0.56	-1.4
4,836,161	-		ABI39_RS19295	0.63	-1.1
4,836,241	-		ABI39_RS19295	0.69	-1.1